Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060244.seq
(677 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 5.3
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 21 9.3
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 9.3
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 21 9.3
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 9.3
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 21 9.3
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 21 9.3
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 21 9.3
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 9.3
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.8 bits (44), Expect = 5.3
Identities = 6/19 (31%), Positives = 11/19 (57%)
Frame = -3
Query: 429 MEIDWRTPPCGGFQGSRGP 373
+++DW P C ++GP
Sbjct: 1940 LDLDWEYPKCWQVDCNKGP 1958
Score = 21.8 bits (44), Expect = 5.3
Identities = 6/19 (31%), Positives = 11/19 (57%)
Frame = -3
Query: 429 MEIDWRTPPCGGFQGSRGP 373
+++DW P C ++GP
Sbjct: 2438 LDLDWEYPKCWQVDCNKGP 2456
Score = 21.4 bits (43), Expect = 7.0
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 495 KYDPTYFRPPLPKDSVSDP 551
++ PT + PP+P S P
Sbjct: 1368 EWQPTEWHPPIPPTSEKPP 1386
Score = 21.4 bits (43), Expect = 7.0
Identities = 6/19 (31%), Positives = 10/19 (52%)
Frame = -3
Query: 429 MEIDWRTPPCGGFQGSRGP 373
+++DW P C +GP
Sbjct: 1515 LDLDWEYPKCWQVDCKKGP 1533
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -2
Query: 268 GREEGYRNGEDDGFLEDDECQVSGWLR 188
G+ N EDD E + Q+ W+R
Sbjct: 189 GQGSSTNNDEDDDDEETGDRQIYPWMR 215
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -2
Query: 268 GREEGYRNGEDDGFLEDDECQVSGWLR 188
G+ N EDD E + Q+ W+R
Sbjct: 189 GQGSSTNNDEDDDDEETGDRQIYPWMR 215
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 21.0 bits (42), Expect = 9.3
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = -1
Query: 200 GMAEDWRSKSSGAKIIMSEVSLAGSGLADVERGALV*AGSN 78
G +DW ++ +GA++I+ + G R + G N
Sbjct: 262 GSYDDWLAEMAGARLIVERFANITDGSIIGVRAPYLRVGGN 302
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.0 bits (42), Expect = 9.3
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = -1
Query: 200 GMAEDWRSKSSGAKIIMSEVSLAGSGLADVERGALV*AGSN 78
G +DW ++ +GA++I+ + G R + G N
Sbjct: 269 GSYDDWLAEMAGARLIVERFANITDGSIIGVRAPYLRVGGN 309
Score = 21.0 bits (42), Expect = 9.3
Identities = 11/43 (25%), Positives = 17/43 (39%)
Frame = +3
Query: 327 PGCDYKTVAALMMEPRDPDSLEIRHKGEFSNQFPWVDLPYENG 455
P C AL ++L + E N +PW+ P +G
Sbjct: 488 PYCSLPNSCALTTRELPGETLRLFTCMECPNNYPWILEPTGDG 530
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 21.0 bits (42), Expect = 9.3
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = +3
Query: 465 LSVIAPKHDSKYDPTYF 515
++ + P D +Y P YF
Sbjct: 446 VTAVQPYQDQEYQPIYF 462
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 372 RDPDSLEIRHKGEF 413
+DP+SL I KG+F
Sbjct: 307 QDPESLLINGKGQF 320
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.0 bits (42), Expect = 9.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 372 RDPDSLEIRHKGEF 413
+DP+SL I KG+F
Sbjct: 307 QDPESLLINGKGQF 320
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -2
Query: 268 GREEGYRNGEDDGFLEDDECQVSGWLR 188
G+ N EDD E + Q+ W+R
Sbjct: 189 GQGSSTNNDEDDDDEETGDRQIYPWMR 215
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,521
Number of Sequences: 336
Number of extensions: 4542
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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