Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060244.seq
         (677 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35278-1|CAA84541.1|  415|Homo sapiens Runt domain containing pr...    32   1.6  
X79550-1|CAA56093.2|  415|Homo sapiens Acute myeloid leukemia ge...    32   1.6  
BC013362-1|AAH13362.1|  429|Homo sapiens RUNX3 protein protein.        32   1.6  
AL445471-1|CAC42093.2|  429|Homo sapiens runt-related transcript...    32   1.6  
AL023096-2|CAA18856.1|  415|Homo sapiens runt-related transcript...    32   1.6  
AL023096-1|CAI20422.1|  429|Homo sapiens runt-related transcript...    32   1.6  

>Z35278-1|CAA84541.1|  415|Homo sapiens Runt domain containing
           protein protein.
          Length = 415

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +3

Query: 360 MMEPRDPDSLEIRHKGEFSNQFPWVDLPYENGAQTLSVIAPKHDSKYDPTYFRPPLP 530
           + E R PD   + + G  S  FP+   P      +LSV      S++  TY  PP P
Sbjct: 258 LTESRFPDP-RMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP 313


>X79550-1|CAA56093.2|  415|Homo sapiens Acute myeloid leukemia gene
           2 protein.
          Length = 415

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +3

Query: 360 MMEPRDPDSLEIRHKGEFSNQFPWVDLPYENGAQTLSVIAPKHDSKYDPTYFRPPLP 530
           + E R PD   + + G  S  FP+   P      +LSV      S++  TY  PP P
Sbjct: 258 LTESRFPDP-RMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP 313


>BC013362-1|AAH13362.1|  429|Homo sapiens RUNX3 protein protein.
          Length = 429

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +3

Query: 360 MMEPRDPDSLEIRHKGEFSNQFPWVDLPYENGAQTLSVIAPKHDSKYDPTYFRPPLP 530
           + E R PD   + + G  S  FP+   P      +LSV      S++  TY  PP P
Sbjct: 272 LTESRFPDP-RMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP 327


>AL445471-1|CAC42093.2|  429|Homo sapiens runt-related transcription
           factor 3 protein.
          Length = 429

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +3

Query: 360 MMEPRDPDSLEIRHKGEFSNQFPWVDLPYENGAQTLSVIAPKHDSKYDPTYFRPPLP 530
           + E R PD   + + G  S  FP+   P      +LSV      S++  TY  PP P
Sbjct: 272 LTESRFPDP-RMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP 327


>AL023096-2|CAA18856.1|  415|Homo sapiens runt-related transcription
           factor 3 protein.
          Length = 415

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +3

Query: 360 MMEPRDPDSLEIRHKGEFSNQFPWVDLPYENGAQTLSVIAPKHDSKYDPTYFRPPLP 530
           + E R PD   + + G  S  FP+   P      +LSV      S++  TY  PP P
Sbjct: 258 LTESRFPDP-RMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP 313


>AL023096-1|CAI20422.1|  429|Homo sapiens runt-related transcription
           factor 3 protein.
          Length = 429

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +3

Query: 360 MMEPRDPDSLEIRHKGEFSNQFPWVDLPYENGAQTLSVIAPKHDSKYDPTYFRPPLP 530
           + E R PD   + + G  S  FP+   P      +LSV      S++  TY  PP P
Sbjct: 272 LTESRFPDP-RMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP 327


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,125,167
Number of Sequences: 237096
Number of extensions: 2903598
Number of successful extensions: 7181
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7172
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)