Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060244.seq
         (677 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025960-1|ABG02204.1|  433|Drosophila melanogaster IP16063p pro...    29   5.8  
AF053091-1|AAC06254.1| 2715|Drosophila melanogaster eyelid protein.    29   5.8  
AE014297-2398|AAN13750.1| 2716|Drosophila melanogaster CG7467-PB...    29   5.8  
AE014297-2397|AAS65166.1| 2556|Drosophila melanogaster CG7467-PC...    29   5.8  
AE014297-2396|AAF55457.1| 2703|Drosophila melanogaster CG7467-PA...    29   5.8  
BT010084-1|AAQ22553.1| 1059|Drosophila melanogaster LD05615p pro...    29   7.7  
AE014296-3744|AAF51884.1| 1059|Drosophila melanogaster CG11133-P...    29   7.7  

>BT025960-1|ABG02204.1|  433|Drosophila melanogaster IP16063p
           protein.
          Length = 433

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 371 PGPRLP*NPPQGGVLQSISMGRSPL*EWRPNPQRYST 481
           PG  +P  PP G   Q       P  ++ P PQRY T
Sbjct: 348 PGGPVPGGPPPGTGQQPPQQNTPPTSQYSPYPQRYPT 384


>AF053091-1|AAC06254.1| 2715|Drosophila melanogaster eyelid protein.
          Length = 2715

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 371 PGPRLP*NPPQGGVLQSISMGRSPL*EWRPNPQRYST 481
           PG  +P  PP G   Q       P  ++ P PQRY T
Sbjct: 347 PGGPVPGGPPPGTGQQPPQQNTPPTSQYSPYPQRYPT 383


>AE014297-2398|AAN13750.1| 2716|Drosophila melanogaster CG7467-PB,
           isoform B protein.
          Length = 2716

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 371 PGPRLP*NPPQGGVLQSISMGRSPL*EWRPNPQRYST 481
           PG  +P  PP G   Q       P  ++ P PQRY T
Sbjct: 348 PGGPVPGGPPPGTGQQPPQQNTPPTSQYSPYPQRYPT 384


>AE014297-2397|AAS65166.1| 2556|Drosophila melanogaster CG7467-PC,
           isoform C protein.
          Length = 2556

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 371 PGPRLP*NPPQGGVLQSISMGRSPL*EWRPNPQRYST 481
           PG  +P  PP G   Q       P  ++ P PQRY T
Sbjct: 348 PGGPVPGGPPPGTGQQPPQQNTPPTSQYSPYPQRYPT 384


>AE014297-2396|AAF55457.1| 2703|Drosophila melanogaster CG7467-PA,
           isoform A protein.
          Length = 2703

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 371 PGPRLP*NPPQGGVLQSISMGRSPL*EWRPNPQRYST 481
           PG  +P  PP G   Q       P  ++ P PQRY T
Sbjct: 348 PGGPVPGGPPPGTGQQPPQQNTPPTSQYSPYPQRYPT 384


>BT010084-1|AAQ22553.1| 1059|Drosophila melanogaster LD05615p
           protein.
          Length = 1059

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -3

Query: 345 FCSRSRDRQVLWRCL*VQHY*C-PLW*GERKDIEMERTTGFWKMMS 211
           FCS   D Q L   L VQHY C P +  +  D+E+ +    W+  S
Sbjct: 330 FCSDDGDMQCLVAALEVQHYSCLPYY--QTADLEVRQQVHSWQARS 373


>AE014296-3744|AAF51884.1| 1059|Drosophila melanogaster CG11133-PA
           protein.
          Length = 1059

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -3

Query: 345 FCSRSRDRQVLWRCL*VQHY*C-PLW*GERKDIEMERTTGFWKMMS 211
           FCS   D Q L   L VQHY C P +  +  D+E+ +    W+  S
Sbjct: 330 FCSDDGDMQCLVAALEVQHYSCLPYY--QTADLEVRQQVHSWQARS 373


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,958,930
Number of Sequences: 53049
Number of extensions: 896118
Number of successful extensions: 2395
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2395
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)