Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060242.seq
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    23   3.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   4.0  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.0  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   5.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.2  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    22   5.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   6.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   6.9  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   6.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.1  

>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +1

Query: 208 ILCKVSCAPRYRRRLGLMERYIEQCVFKYLRAEPEDHHFLMT 333
           +L  +S  P Y     L  +Y+E+C+ + LR  P  H    T
Sbjct: 29  VLGDLSKKPSYNDLQNL--KYLERCIKETLRLYPSVHFISRT 68


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 334 RSLR-NDDLRVPHGDT*TRTVRCTFPLNPVF 245
           R LR +D+  +  G    RT RC F L+P F
Sbjct: 25  RGLRLHDNPSLREGLKGARTFRCVFVLDPWF 55


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 265 RYIEQCVFKYLRAEPEDH 318
           +Y+E+CV + LR  P  H
Sbjct: 362 KYLERCVKEVLRLYPSVH 379


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 265 RYIEQCVFKYLRAEPEDH 318
           +Y+E+CV + LR  P  H
Sbjct: 362 KYLERCVKEVLRLYPSVH 379


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 594 YFIYSIITPVK 626
           YFIY+ + PVK
Sbjct: 53  YFIYAFVAPVK 63


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 594 YFIYSIITPVK 626
           YFIY+ + PVK
Sbjct: 286 YFIYAFVAPVK 296


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 594 YFIYSIITPVK 626
           YFIY+ + PVK
Sbjct: 286 YFIYAFVAPVK 296


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 208 ILCKVSCAPRYRRRLGLMERYIEQCVFKYLRAEPEDH 318
           +L  +   P Y     L  +Y+E+C+ + LR  P  H
Sbjct: 29  VLGDIHAKPTYSDLQNL--KYLERCIKESLRLYPSVH 63


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 587 LPAIGMCFIHDPITYXSAT 531
           +P+ G+C  HD I   S+T
Sbjct: 106 MPSAGLCGSHDEIPDISST 124


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 346 NTPENREYLAEIMFESFNVPGLYIAVQAVLAL 441
           N  ++  +   + F  FNV   Y+A + VL L
Sbjct: 517 NNYQSLAHYLRVFFTVFNVVHCYLASELVLML 548


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 587 LPAIGMCFIHDPITYXSAT 531
           +P+ G+C  HD I   S+T
Sbjct: 54  MPSAGLCGSHDEIPDISST 72


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 587 LPAIGMCFIHDPITYXSAT 531
           +P+ G+C  HD I   S+T
Sbjct: 237 MPSAGLCGSHDEIPDISST 255


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 205 RILCKVSCAPRYRR 246
           R++C V  A RYR+
Sbjct: 176 RVVCYVQAAARYRK 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,100
Number of Sequences: 336
Number of extensions: 3417
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)