Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060242.seq
(669 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 153 1e-37
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 128 4e-30
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 97 8e-21
12_02_1282 + 27528159-27529148,27529549-27529614 97 1e-20
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 97 1e-20
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 97 1e-20
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 97 1e-20
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 97 1e-20
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 97 1e-20
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 95 5e-20
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 92 4e-19
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 90 2e-18
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 85 6e-17
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 61 9e-10
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 44 1e-04
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 38 0.005
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 31 0.83
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 153 bits (371), Expect = 1e-37
Identities = 73/120 (60%), Positives = 89/120 (74%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
MER+ +QC+F YLR +PEDH+FL+TE PL PE REY EIMFE+FNVPGLYIA Q VLA
Sbjct: 102 MERFWQQCIFNYLRCDPEDHYFLLTESPLTPPETREYTGEIMFETFNVPGLYIACQPVLA 161
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
LAA + T+ + TG+V +G THIVPVA YVIGS I+ IPI G+++T FIQ LL
Sbjct: 162 LAAGY---TTTKCEMTGVVVDVGDGATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLL 218
Score = 76.2 bits (179), Expect = 2e-14
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 12/93 (12%)
Frame = +2
Query: 11 PACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKET--------AKVGDQSTRRMTKAVED 166
PA VID GTGYTK+GFAGN EP FI P+ +A+ +T G+ + + D
Sbjct: 7 PAVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMAD 66
Query: 167 LDFFIGDEAF----EATGYSVKYPVRHGIVEDW 253
LDFFIG++A + Y++ YP+ +G VE+W
Sbjct: 67 LDFFIGEDALARSRSSNTYNLSYPIHNGQVENW 99
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 128 bits (309), Expect = 4e-30
Identities = 63/132 (47%), Positives = 89/132 (67%), Gaps = 12/132 (9%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
MER+ +QC+F YLR PE+H+FL+T+ P++TPE+RE EIMFE+FNVPGLYI+VQ+VL+
Sbjct: 101 MERFWQQCIFNYLRCNPEEHYFLLTDSPVSTPESRECAGEIMFETFNVPGLYISVQSVLS 160
Query: 439 LAASW---KSRTSAERT---------FTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIA 582
L+A + KS + + +TG+V +G H+VPV YVIGS IK P +
Sbjct: 161 LSAGYAFLKSISDEDSVSVFCFAIPLYTGVVVDIGDGAPHVVPVVNGYVIGSSIKSFPFS 220
Query: 583 GRNITSFIQSLL 618
G ++T F+ LL
Sbjct: 221 GSDVTQFVLQLL 232
Score = 79.4 bits (187), Expect = 2e-15
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 11/92 (11%)
Frame = +2
Query: 11 PACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKET-------AKVGDQSTRRMTKAVEDL 169
PA VID GTGY+KLGF+GN EP F IP+ +A+ E+ + + + DL
Sbjct: 7 PAVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADL 66
Query: 170 DFFIGDEA---FEATG-YSVKYPVRHGIVEDW 253
DFFIGDEA F+++G Y+ K+P+ HG V+DW
Sbjct: 67 DFFIGDEALSLFKSSGLYTRKHPINHGQVDDW 98
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 97.5 bits (232), Expect = 8e-21
Identities = 50/120 (41%), Positives = 72/120 (60%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFESFNVP +Y+A+QAVL+
Sbjct: 84 MEKIWHHTFYNELRVAPEEHPALLTEAPLNPKANREKMTQIMFESFNVPAMYVAIQAVLS 143
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ Y + I + +AGR++T + +L
Sbjct: 144 LYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKIL 195
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
Query: 200 ATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HGIV +W
Sbjct: 63 KRGILTLKYPIEHGIVSNW 81
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 97.1 bits (231), Expect = 1e-20
Identities = 48/120 (40%), Positives = 72/120 (60%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 84 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLS 143
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ Y + I + +AGR++T ++ +L
Sbjct: 144 LYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 195
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
Query: 200 ATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HGIV +W
Sbjct: 63 KRGILTLKYPIEHGIVNNW 81
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 97.1 bits (231), Expect = 1e-20
Identities = 48/120 (40%), Positives = 72/120 (60%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 84 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 143
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ Y + I + +AGR++T ++ +L
Sbjct: 144 LYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 195
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
Query: 200 ATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HGIV +W
Sbjct: 63 KRGILTLKYPIEHGIVSNW 81
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 96.7 bits (230), Expect = 1e-20
Identities = 49/120 (40%), Positives = 72/120 (60%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FNVP +Y+A+QAVL+
Sbjct: 84 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLS 143
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ Y + I + +AGR++T + +L
Sbjct: 144 LYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKIL 195
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
Query: 200 ATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HGIV +W
Sbjct: 63 KRGILTLKYPIEHGIVSNW 81
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 96.7 bits (230), Expect = 1e-20
Identities = 49/120 (40%), Positives = 71/120 (59%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PEDH L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 83 MEKIWHHTFYNELRVAPEDHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAIQAVLS 142
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ Y + I + +AGR++T + +L
Sbjct: 143 LYASGRT--------TGIVLDSGDGVSHTVPIYEGYTLPHAILRLDLAGRDLTDHLMKIL 194
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 10 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQA 61
Query: 200 ATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HGIV +W
Sbjct: 62 KRGILTLKYPIEHGIVNNW 80
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 96.7 bits (230), Expect = 1e-20
Identities = 49/120 (40%), Positives = 72/120 (60%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FNVP +Y+A+QAVL+
Sbjct: 84 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLS 143
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ Y + I + +AGR++T + +L
Sbjct: 144 LYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKIL 195
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
Query: 200 ATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HGIV +W
Sbjct: 63 KRGILTLKYPIEHGIVSNW 81
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 96.7 bits (230), Expect = 1e-20
Identities = 49/120 (40%), Positives = 72/120 (60%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FNVP +Y+A+QAVL+
Sbjct: 84 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLS 143
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ Y + I + +AGR++T + +L
Sbjct: 144 LYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKIL 195
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
Query: 200 ATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HGIV +W
Sbjct: 63 KRGILTLKYPIEHGIVSNW 81
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 95.1 bits (226), Expect = 5e-20
Identities = 48/120 (40%), Positives = 72/120 (60%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+F+VP +Y+A+QAVL+
Sbjct: 84 MEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFSVPAMYVAIQAVLS 143
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ Y + I + +AGR++T + +L
Sbjct: 144 LYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKIL 195
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
Query: 200 ATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HGIV +W
Sbjct: 63 KRGILTLKYPIEHGIVSNW 81
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 91.9 bits (218), Expect = 4e-19
Identities = 46/120 (38%), Positives = 71/120 (59%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE P+N NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 83 MEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKANREKMTQIMFETFNCPAMYVAIQAVLS 142
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ + + I + +AGR++T + +L
Sbjct: 143 LYASGRT--------TGIVLDSGDGVSHTVPIYEGFTLPHAILRLDLAGRDLTDNLMKIL 194
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 10 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 61
Query: 200 ATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HGIV +W
Sbjct: 62 KRGILTLKYPIEHGIVNNW 80
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 89.8 bits (213), Expect = 2e-18
Identities = 47/120 (39%), Positives = 68/120 (56%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 84 MEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLS 143
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS + IV +GVTH VP+ Y + I + +AGR++T + +L
Sbjct: 144 LYASGR-----------IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDCLMKIL 192
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
Query: 200 ATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HGIV +W
Sbjct: 63 KRGILTLKYPIEHGIVNNW 81
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 84.6 bits (200), Expect = 6e-17
Identities = 44/115 (38%), Positives = 67/115 (58%)
Frame = +1
Query: 274 EQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASW 453
+ + L+ +P + L+T+PPLN +NRE + E MFE +N G++I VQAVL+L
Sbjct: 88 DHAFYSELKVDPSECKILLTDPPLNPVKNREKMIETMFEKYNFAGVFIQVQAVLSL---- 143
Query: 454 KSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
A+ TG+V +GVTH+VPV + K + +AGR+ITS++ LL
Sbjct: 144 ----YAQGLLTGLVIDSGDGVTHVVPVVDGFSYPHITKRMNVAGRHITSYLVDLL 194
Score = 37.1 bits (82), Expect = 0.013
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTGY K GFAG P + P + + + ++S + E D +G +
Sbjct: 8 VCDNGTGYVKCGFAGENFPTSVFPCVVG-RPLLRY-EESLQEQ----ELTDIVVGAACAD 61
Query: 200 AT-GYSVKYPVRHGIVEDW 253
V YPV +GIV+ W
Sbjct: 62 LRHQLDVSYPVTNGIVQSW 80
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 60.9 bits (141), Expect = 9e-10
Identities = 37/108 (34%), Positives = 52/108 (48%)
Frame = +1
Query: 295 LRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAE 474
L PE+H L+ EP NT + RE AE+MFE + VP L++A AVL AS ++
Sbjct: 161 LLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRA----- 215
Query: 475 RTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
T +V G T + V YV+ + PI G +T + L
Sbjct: 216 ---TSLVVDSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSL 260
Score = 31.1 bits (67), Expect = 0.83
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 8 VPACVIDVGTGYTKLGFAGNKEPQFIIPS 94
V A VIDVG+ K G+AG+ P+ + PS
Sbjct: 7 VSAIVIDVGSYSCKAGYAGDDTPKAVFPS 35
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/115 (20%), Positives = 49/115 (42%)
Frame = +1
Query: 274 EQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASW 453
E+ + L+ +P + L+ EP N P + E++FE L +A L
Sbjct: 82 ERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSLVHLYEA 141
Query: 454 KSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
+ S R +V TH PV + + ++ + + G+ +T++++ L+
Sbjct: 142 SRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKELI 196
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIA 103
V+D G G K GF G+ P ++P+ +A
Sbjct: 9 VLDNGGGLLKAGFGGDMNPTAVVPNCMA 36
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +1
Query: 361 REYLAEIMFESFNVPGLYIAVQAVLALAA 447
RE LA++MFE FNV G Y + QAVL+L A
Sbjct: 159 REQLAQLMFEKFNVSGFYDSEQAVLSLYA 187
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 31.1 bits (67), Expect = 0.83
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 268 YIEQCVFKYLRAEPE-DHHFLMTEPPLNTPENREYLAEIMFESFNVPGL 411
YI F L A E H LMTE N +R ++E++FE++ VP +
Sbjct: 99 YILDFGFDRLGATSEVGHPILMTECECNPSFSRARMSELLFETYGVPSI 147
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,621,615
Number of Sequences: 37544
Number of extensions: 377496
Number of successful extensions: 895
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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