Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060242.seq
(669 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 5e-21
SB_56| Best HMM Match : Actin (HMM E-Value=0) 98 5e-21
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 98 5e-21
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 7e-21
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 97 2e-20
SB_54| Best HMM Match : Actin (HMM E-Value=0) 89 4e-18
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 3e-16
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 82 5e-16
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 1e-15
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 78 7e-15
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 62 4e-10
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 58 9e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 33 0.16
SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5) 31 0.64
SB_15553| Best HMM Match : SCP (HMM E-Value=1.1e-16) 30 1.5
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 29 2.6
SB_58589| Best HMM Match : ATP-cone (HMM E-Value=2.2) 29 3.4
SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 98.3 bits (234), Expect = 5e-21
Identities = 49/120 (40%), Positives = 72/120 (60%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 82 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLS 141
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GVTH VP+ Y + I + +AGR++T ++ +L
Sbjct: 142 LYASGRT--------TGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 193
Score = 52.8 bits (121), Expect = 2e-07
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 VPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGD 187
V A V+D G+G K GFAG+ P+ + PS VG + + + D ++GD
Sbjct: 5 VAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGD 56
Query: 188 EAFEATG-YSVKYPVRHGIVEDW 253
EA G ++KYP+ HGIV +W
Sbjct: 57 EAQSKRGILTLKYPIEHGIVTNW 79
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 98.3 bits (234), Expect = 5e-21
Identities = 49/120 (40%), Positives = 72/120 (60%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 82 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLS 141
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GVTH VP+ Y + I + +AGR++T ++ +L
Sbjct: 142 LYASGRT--------TGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 193
Score = 52.8 bits (121), Expect = 2e-07
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 VPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGD 187
V A V+D G+G K GFAG+ P+ + PS VG + + + D ++GD
Sbjct: 5 VAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGD 56
Query: 188 EAFEATG-YSVKYPVRHGIVEDW 253
EA G ++KYP+ HGIV +W
Sbjct: 57 EAQSKRGILTLKYPIEHGIVTNW 79
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 98.3 bits (234), Expect = 5e-21
Identities = 49/120 (40%), Positives = 72/120 (60%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 83 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLS 142
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GVTH VP+ Y + I + +AGR++T ++ +L
Sbjct: 143 LYASGRT--------TGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
Score = 52.8 bits (121), Expect = 2e-07
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 VPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGD 187
V A V+D G+G K GFAG+ P+ + PS VG + + + D ++GD
Sbjct: 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGD 57
Query: 188 EAFEATG-YSVKYPVRHGIVEDW 253
EA G ++KYP+ HGIV +W
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNW 80
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 97.9 bits (233), Expect = 7e-21
Identities = 49/120 (40%), Positives = 72/120 (60%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 83 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLS 142
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GVTH VP+ Y + I + +AGR++T ++ +L
Sbjct: 143 LYASGRT--------TGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKIL 194
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 VPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGD 187
+ A V+D G+G K GFAG+ P+ + PS VG + + + D ++GD
Sbjct: 6 IAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGD 57
Query: 188 EAFEATG-YSVKYPVRHGIVEDW 253
EA G ++KYP+ HGIV +W
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNW 80
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 96.7 bits (230), Expect = 2e-20
Identities = 46/67 (68%), Positives = 52/67 (77%)
Frame = +1
Query: 418 AVQAVLALAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNIT 597
A +AVLALAASW SR ERT TG V +GVTH++PVA YVIGSCIKHIPIAGR+IT
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 598 SFIQSLL 618
F+Q LL
Sbjct: 100 FFVQQLL 106
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +2
Query: 98 IAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFEATGYSVK 220
IAIKE+AKVG++S R K VEDLDFFIGDEA + Y+ K
Sbjct: 2 IAIKESAKVGNKSLGRSAKGVEDLDFFIGDEAIDKPSYATK 42
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 88.6 bits (210), Expect = 4e-18
Identities = 49/111 (44%), Positives = 68/111 (61%)
Frame = +1
Query: 286 FKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRT 465
F LR ED L+TE PLN NRE + ++MFESFNVP +Y+AVQAV+AL AS ++
Sbjct: 2136 FDQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALYASGRT-- 2193
Query: 466 SAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
TG V +GV+H VPV Y + + I +AGR++T ++Q L+
Sbjct: 2194 ------TGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLV 2238
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 82.2 bits (194), Expect = 3e-16
Identities = 42/108 (38%), Positives = 64/108 (59%)
Frame = +1
Query: 295 LRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAE 474
+ +P + L+TEPPLN +NRE + E+MFE++ G+YIA+QAVL L A+
Sbjct: 98 MNIDPRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTL--------YAQ 149
Query: 475 RTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
TG+V +GVTHI PV + + + + IAGR+IT ++ L+
Sbjct: 150 GLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLM 197
Score = 54.8 bits (126), Expect = 6e-08
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIA---IKETAKVGDQSTRRMTKAVEDLDFFIGDE 190
V D GTG+ K G+AG+ P I PS + I+ + KVGD +E D +GDE
Sbjct: 10 VCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGD---------IEVKDLMVGDE 60
Query: 191 AFEAT-GYSVKYPVRHGIVEDW----V*WKGTSNSACLSISVRNPKIIIS 325
A + V YP+ +GIV +W W T + ++I RN K++++
Sbjct: 61 ASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLT 110
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 81.8 bits (193), Expect = 5e-16
Identities = 39/69 (56%), Positives = 47/69 (68%)
Frame = +2
Query: 47 KLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFEATGYSVKYP 226
K G+ K Q TIAIKE+AKVG++S R K VEDLDFFIGDEA + Y+ K+P
Sbjct: 242 KRGYDLAKAVQSNTQGTIAIKESAKVGNKSLGRSAKGVEDLDFFIGDEAIDKPSYATKWP 301
Query: 227 VRHGIVEDW 253
+RH IVEDW
Sbjct: 302 IRHAIVEDW 310
Score = 51.2 bits (117), Expect(2) = 1e-15
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = +1
Query: 256 LMERYIEQCVFKYLRAEPEDHHFLM 330
LMER+ EQC+FKYLRAEPEDH+FL+
Sbjct: 312 LMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 49.2 bits (112), Expect(2) = 1e-15
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +1
Query: 427 AVLALAASWKSRTSAERTFTGIVSRQRNGVTHIVPV 534
AVLALAASW SR ERT TG V +GVTH++PV
Sbjct: 337 AVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPV 372
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 80.2 bits (189), Expect = 1e-15
Identities = 41/92 (44%), Positives = 57/92 (61%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 83 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLS 142
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPV 534
L AS ++ TGIV +GV+H VP+
Sbjct: 143 LYASGRT--------TGIVMDSGDGVSHTVPI 166
Score = 52.8 bits (121), Expect = 2e-07
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 VPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGD 187
+ A VID G+G K GFAG+ P+ + PS VG + + + D ++GD
Sbjct: 6 IAALVIDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGD 57
Query: 188 EAFEATG-YSVKYPVRHGIVEDW 253
EA G ++KYP+ HGIV +W
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNW 80
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 77.8 bits (183), Expect = 7e-15
Identities = 41/101 (40%), Positives = 63/101 (62%)
Frame = +1
Query: 316 HHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIV 495
H L+TE PLN NRE AE+ FE+FNVP L+I++QAVL+L A+ ++ TG+V
Sbjct: 127 HPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRT--------TGVV 178
Query: 496 SRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
+GV+H VP+ + + I IAGR+++ +++ LL
Sbjct: 179 LDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLL 219
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 66.9 bits (156), Expect = 1e-11
Identities = 34/87 (39%), Positives = 54/87 (62%)
Frame = +1
Query: 358 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVSRQRNGVTHIVPVA 537
N + + +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV +GVTH VP+
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVMDSGDGVTHTVPIY 129
Query: 538 XXYVIGSCIKHIPIAGRNITSFIQSLL 618
Y + I + +AGR++T ++ +L
Sbjct: 130 EGYALPHAIIRLDLAGRDLTDYLMKIL 156
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 VPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGD 187
V A VID G+G K GFAG+ P+ + PS VG + + + D ++GD
Sbjct: 5 VAALVIDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGD 56
Query: 188 EAFEATG-YSVKYPVRHGIVEDW 253
EA G ++KYP+ HGIV +W
Sbjct: 57 EAQSKRGILTLKYPIEHGIVTNW 79
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/80 (38%), Positives = 50/80 (62%)
Frame = +1
Query: 379 IMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGS 558
IMFE+FN P +Y+A+QAVL+L AS ++ TG+V +GV+H VP+ Y +
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRT--------TGVVFDSGDGVSHNVPIYEGYALPH 52
Query: 559 CIKHIPIAGRNITSFIQSLL 618
I + +AGR++T ++ L+
Sbjct: 53 AILRLDLAGRDLTDYLMKLM 72
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 57.6 bits (133), Expect = 9e-09
Identities = 37/115 (32%), Positives = 56/115 (48%)
Frame = +1
Query: 256 LMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVL 435
L E+ ++ K ++++ H LM+E NT RE L E+MFE +NVP ++ +VL
Sbjct: 14 LFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNVPAFFLCKNSVL 73
Query: 436 ALAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITS 600
A+ +S G+V T VPV YV+ I P+AG IT+
Sbjct: 74 TAFANGRS--------NGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITA 120
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 14 ACVIDVGTGYTKLGFAGNKEPQFIIPSTI 100
A V+D G G +K+GFAG++ P+ I P+ +
Sbjct: 702 AIVLDNGCGISKIGFAGDRVPRIIQPAVV 730
>SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)
Length = 612
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 477 HLHWHRK*TAEWRYSHCSSCRX-ICYWIMYKTHPYCW*KHYFIY 605
H H +R + +C C CY Y+ H YCW +H++ Y
Sbjct: 7 HRHQNRHNRCYRHHHYCCYCHHRYCY---YRHHHYCWYRHHYHY 47
>SB_15553| Best HMM Match : SCP (HMM E-Value=1.1e-16)
Length = 141
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 331 TEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
T PP N P E +A++M++S + G+ I+ V+A
Sbjct: 88 TNPPANAPAGTEEVAQLMWQSTSAVGVGISGNVVVA 123
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTI 100
VIDVG+ K+GFAG+ P+ + P +
Sbjct: 1360 VIDVGSHMWKVGFAGDDAPKGVFPPIV 1386
>SB_58589| Best HMM Match : ATP-cone (HMM E-Value=2.2)
Length = 360
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 388 ESFNVP-GLYIAVQAVLALAASWKSRTSAERTFTGIVSRQR 507
++FNVP GL + L AS K TSA F G+VS Q+
Sbjct: 69 KAFNVPQGLRESFLGNLRAIASSKGTTSANEEFEGLVSLQK 109
>SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -3
Query: 247 FYDTVAHRILYRVSCGFKSFIT--DEKIQIFDSLSHPPSTLIA 125
F T I Y + C F +F D K IFD SHP +++A
Sbjct: 1192 FDSTDYQPIEYNIDCKFDTFSATIDVKKTIFDLQSHPTDSIVA 1234
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,658,041
Number of Sequences: 59808
Number of extensions: 445545
Number of successful extensions: 1001
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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