Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060242.seq
(669 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 97 4e-22
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 97 4e-22
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 97 4e-22
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 93 7e-21
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 97.1 bits (231), Expect = 4e-22
Identities = 48/120 (40%), Positives = 72/120 (60%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 83 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 142
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ Y + I + +AGR++T ++ +L
Sbjct: 143 LYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
Score = 52.8 bits (121), Expect = 9e-09
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 VPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGD 187
V A V+D G+G K GFAG+ P+ + PS VG + + + D ++GD
Sbjct: 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGD 57
Query: 188 EAFEATG-YSVKYPVRHGIVEDW 253
EA G ++KYP+ HGIV +W
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNW 80
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 97.1 bits (231), Expect = 4e-22
Identities = 48/120 (40%), Positives = 72/120 (60%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 83 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 142
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ Y + I + +AGR++T ++ +L
Sbjct: 143 LYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
Score = 52.8 bits (121), Expect = 9e-09
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 VPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGD 187
V A V+D G+G K GFAG+ P+ + PS VG + + + D ++GD
Sbjct: 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGD 57
Query: 188 EAFEATG-YSVKYPVRHGIVEDW 253
EA G ++KYP+ HGIV +W
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNW 80
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 97.1 bits (231), Expect = 4e-22
Identities = 48/120 (40%), Positives = 72/120 (60%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 83 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 142
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ Y + I + +AGR++T ++ +L
Sbjct: 143 LYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
Score = 52.8 bits (121), Expect = 9e-09
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 VPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGD 187
V A V+D G+G K GFAG+ P+ + PS VG + + + D ++GD
Sbjct: 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGD 57
Query: 188 EAFEATG-YSVKYPVRHGIVEDW 253
EA G ++KYP+ HGIV +W
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNW 80
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 93.1 bits (221), Expect = 7e-21
Identities = 46/120 (38%), Positives = 71/120 (59%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+F P +Y+A+QAVL+
Sbjct: 83 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKMTQIMFETFAAPAVYVAIQAVLS 142
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TG+V +GV+H VP+ Y + I + +AGR++T ++ +L
Sbjct: 143 LYASGRT--------TGVVLDSGDGVSHTVPIYEGYALPHAILRMDLAGRDLTDYLMKIL 194
Score = 51.6 bits (118), Expect = 2e-08
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 14 ACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEA 193
A V+D G+G K GFAG+ P+ + PS VG + + + + D ++GDEA
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGNKDAYVGDEA 59
Query: 194 FEATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HGI+ +W
Sbjct: 60 QSKRGILTLKYPIEHGIITNW 80
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,673
Number of Sequences: 2352
Number of extensions: 15266
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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