Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060242.seq
(669 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 160 9e-40
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 97 9e-21
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 97 1e-20
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 95 3e-20
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 95 3e-20
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 95 3e-20
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 95 3e-20
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 93 1e-19
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 93 1e-19
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 93 1e-19
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 93 2e-19
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 88 6e-18
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 83 2e-16
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 82 4e-16
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 64 8e-11
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 53 2e-07
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 44 9e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 42 5e-04
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 36 0.018
At3g55120.1 68416.m06121 chalcone-flavanone isomerase / chalcone... 29 2.1
At4g12870.1 68417.m02015 gamma interferon responsive lysosomal t... 27 8.5
At2g02640.1 68415.m00203 DC1 domain-containing protein contain... 27 8.5
At2g02610.1 68415.m00200 DC1 domain-containing protein contain... 27 8.5
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 160 bits (388), Expect = 9e-40
Identities = 74/120 (61%), Positives = 94/120 (78%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
MERY +QC+F YLR +PEDH+FL+TE PL PE+REY EI+FE+FNVPGLYIAV +VLA
Sbjct: 101 MERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFETFNVPGLYIAVNSVLA 160
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
LAA + T+++ TG+V +G TH+VPVA YVIGSCIK IPIAG+++T FIQ L+
Sbjct: 161 LAAGY---TTSKCEMTGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLM 217
Score = 82.6 bits (195), Expect = 2e-16
Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 11/92 (11%)
Frame = +2
Query: 11 PACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVE-------DL 169
PA VID GTGYTK+GFAGN EP FI+P+ +A+ E+ +S+ + T + DL
Sbjct: 7 PAIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL 66
Query: 170 DFFIGDEAF----EATGYSVKYPVRHGIVEDW 253
DF+IGDEA ++ +++ YP+ HG VEDW
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDW 98
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 97.1 bits (231), Expect = 9e-21
Identities = 48/120 (40%), Positives = 72/120 (60%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 84 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 143
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ Y + I + +AGR++T ++ +L
Sbjct: 144 LYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 195
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
Query: 200 ATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HGIV +W
Sbjct: 63 KRGILTLKYPIEHGIVSNW 81
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 96.7 bits (230), Expect = 1e-20
Identities = 49/120 (40%), Positives = 72/120 (60%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FNVP +Y+A+QAVL+
Sbjct: 84 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLS 143
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ Y + I + +AGR++T + +L
Sbjct: 144 LYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKIL 195
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
Query: 200 ATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HGIV +W
Sbjct: 63 KRGILTLKYPIEHGIVSNW 81
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 95.5 bits (227), Expect = 3e-20
Identities = 48/120 (40%), Positives = 71/120 (59%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 84 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 143
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ Y + I + +AGR++T + +L
Sbjct: 144 LYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKIL 195
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
Query: 200 ATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HGIV +W
Sbjct: 63 KRGILTLKYPIEHGIVNNW 81
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 95.5 bits (227), Expect = 3e-20
Identities = 48/120 (40%), Positives = 71/120 (59%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 84 MEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLS 143
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ Y + I + +AGR++T + +L
Sbjct: 144 LYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKIL 195
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
Query: 200 ATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HGIV +W
Sbjct: 63 KRGILTLKYPIEHGIVNNW 81
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 95.5 bits (227), Expect = 3e-20
Identities = 48/120 (40%), Positives = 71/120 (59%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 84 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 143
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ Y + I + +AGR++T + +L
Sbjct: 144 LYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKIL 195
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
Query: 200 ATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HGIV +W
Sbjct: 63 KRGILTLKYPIEHGIVNNW 81
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 95.5 bits (227), Expect = 3e-20
Identities = 48/120 (40%), Positives = 71/120 (59%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 84 MEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLS 143
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ Y + I + +AGR++T + +L
Sbjct: 144 LYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKIL 195
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
Query: 200 ATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HGIV +W
Sbjct: 63 KRGILTLKYPIEHGIVNNW 81
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 93.5 bits (222), Expect = 1e-19
Identities = 47/120 (39%), Positives = 72/120 (60%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 84 MEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLS 143
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ + + I + +AGR++T ++ +L
Sbjct: 144 LYASGRT--------TGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKIL 195
Score = 51.6 bits (118), Expect = 5e-07
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSV--------VGRPRHHGVMVGMNQKDAYVGDEAQS 62
Query: 200 ATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HG+V +W
Sbjct: 63 KRGILTLKYPIEHGVVSNW 81
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 93.5 bits (222), Expect = 1e-19
Identities = 47/120 (39%), Positives = 72/120 (60%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 84 MEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLS 143
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ + + I + +AGR++T ++ +L
Sbjct: 144 LYASGRT--------TGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKIL 195
Score = 51.6 bits (118), Expect = 5e-07
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSV--------VGRPRHHGVMVGMNQKDAYVGDEAQS 62
Query: 200 ATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HG+V +W
Sbjct: 63 KRGILTLKYPIEHGVVSNW 81
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 93.5 bits (222), Expect = 1e-19
Identities = 47/120 (39%), Positives = 72/120 (60%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+
Sbjct: 84 MEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLS 143
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TGIV +GV+H VP+ + + I + +AGR++T ++ +L
Sbjct: 144 LYASGRT--------TGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKIL 195
Score = 51.6 bits (118), Expect = 5e-07
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSV--------VGRPRHHGVMVGMNQKDAYVGDEAQS 62
Query: 200 ATG-YSVKYPVRHGIVEDW 253
G ++KYP+ HG+V +W
Sbjct: 63 KRGILTLKYPIEHGVVSNW 81
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 93.1 bits (221), Expect = 2e-19
Identities = 47/120 (39%), Positives = 71/120 (59%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR EPE+H L+TE PLN NRE + +IMFESF P +YI +QAVL+
Sbjct: 85 MEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQAVLS 144
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L +S ++ TGIV +GV+H VP+ Y + I + +AGR++T ++ ++
Sbjct: 145 LYSSGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIM 196
Score = 58.4 bits (135), Expect = 4e-09
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 14 ACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEA 193
A V D GTG K GFAG+ P+ + PS VG R + +++ D F+GDEA
Sbjct: 10 AIVCDNGTGMVKAGFAGDDAPRAVFPSV--------VGRPRHRGVMVGMDEKDTFVGDEA 61
Query: 194 FEATG-YSVKYPVRHGIVEDW 253
G S+KYP+ HG+V +W
Sbjct: 62 QARRGILSLKYPIEHGVVSNW 82
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 87.8 bits (208), Expect = 6e-18
Identities = 46/120 (38%), Positives = 67/120 (55%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME + + L+ P D L+T+PPLN +NRE + E MFE +N G++I +QAVL
Sbjct: 83 MEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFEKYNFAGVFIQIQAVLT 142
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L A+ TG+V +GVTH+VPV Y K + +AGR+IT+++ LL
Sbjct: 143 L--------YAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLL 194
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D GTGY K GFAG P + P + + + + + K D +G+ E
Sbjct: 8 VCDNGTGYVKCGFAGENFPTSVFPCVVG-RPLLRYEESLMEQQVK-----DIVVGETCSE 61
Query: 200 AT-GYSVKYPVRHGIVEDW 253
+ YPV +GIV++W
Sbjct: 62 LRHQLDINYPVHNGIVQNW 80
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 82.6 bits (195), Expect = 2e-16
Identities = 43/120 (35%), Positives = 70/120 (58%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR PE+H L+TE PLN +RE + +IMFE+F VP +YI +QA L+
Sbjct: 39 MEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALS 98
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L AS ++ TG V +GV++IVP+ + I + +AGR++T+++ ++
Sbjct: 99 LHASGRT--------TGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIM 150
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 170 DFFIGDEAFEATGY-SVKYPVRHGIVEDW 253
D F+GD+A +G ++ YP+ HG+V +W
Sbjct: 8 DLFVGDDAEARSGILTLDYPMEHGVVSNW 36
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 81.8 bits (193), Expect = 4e-16
Identities = 42/120 (35%), Positives = 69/120 (57%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLA 438
ME+ + LR +PE+H L+TE P N NRE + +IMFESF+VP +Y+++Q+VL
Sbjct: 73 MEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLY 132
Query: 439 LAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
L +S ++ TG+V V+H VPV Y + I + + GR++T ++ ++
Sbjct: 133 LYSSGRT--------TGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIM 184
Score = 31.5 bits (68), Expect = 0.52
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 199
V D G G + GFAG++ P+ + P + R + + ++G+E
Sbjct: 5 VCDKGHGMVQAGFAGDEAPKVVFPCVVG-------------RPRDGLNPNESYVGEEGHA 51
Query: 200 ATGY-SVKYPVRHGIVEDW 253
++K P+ HGIV +W
Sbjct: 52 NRDILTLKDPMEHGIVNNW 70
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 64.1 bits (149), Expect = 8e-11
Identities = 38/114 (33%), Positives = 56/114 (49%)
Frame = +1
Query: 256 LMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVL 435
L++ E L +P +H L+ EPPLNT + RE AE+MFE + VP L++A VL
Sbjct: 105 LVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVL 164
Query: 436 ALAASWKSRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNIT 597
A+ ++ T +V G T I PV YV+ + P+ G +T
Sbjct: 165 TSFATGRA--------TSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLT 210
Score = 35.5 bits (78), Expect = 0.032
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 15/97 (15%)
Frame = +2
Query: 8 VPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAI----------KETAKVGDQSTRRMTKA 157
V A V+D+G+ K G+AG P+ + PS I ++ K S T++
Sbjct: 7 VSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKTES 66
Query: 158 VEDLD---FFIGDEA--FEATGYSVKYPVRHGIVEDW 253
++ ++G +A + V P++ GIV DW
Sbjct: 67 EKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDW 103
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Frame = +1
Query: 295 LRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIA-VQAVLAL-AASWKSRTS 468
L P L+TE PL+ P + E++FE F LYIA Q+++ L AS + +
Sbjct: 88 LHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLYIAHPQSLVHLYEASRQPDSI 147
Query: 469 AERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFIQSLL 618
+T +V TH VPV + + IK I + G+ T++++ L+
Sbjct: 148 LSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELV 197
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 44.0 bits (99), Expect = 9e-05
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 259 MERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPEN-REYLAEIMFESFNVPGLYIAVQAVL 435
ME + V+ L E + ++ PL TP+ RE L ++MFE+FNV G Y + QAVL
Sbjct: 69 MEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFNVSGFYASEQAVL 128
Query: 436 ALAA 447
+L A
Sbjct: 129 SLYA 132
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 41.5 bits (93), Expect = 5e-04
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Frame = +1
Query: 256 LMERYIEQCVFKYLRAEPE--DHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQA 429
+ME YI F L A DH L+TE N ++R +AE++FE++ VP + V A
Sbjct: 96 IME-YILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYGVPAVAFGVDA 154
Query: 430 VLALAASWK-SRTSAERTFTGIVSRQRNGVTHIVPVAXXYVIGSCIKHIPIAGRNITSFI 606
A S+K ++ GIV TH +P I I G ++T ++
Sbjct: 155 ----AFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYL 210
Query: 607 QSLL 618
+ LL
Sbjct: 211 KQLL 214
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 20 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQST 139
VID G Y ++G+AG EP+ + + + G+ T
Sbjct: 23 VIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKATGETVT 62
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 36.3 bits (80), Expect = 0.018
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
Frame = +2
Query: 8 VPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLD----- 172
V A V+D+G+ K G+AG P+ + PS + + + T+ ++ D
Sbjct: 7 VSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEKGK 66
Query: 173 --FFIGDEA--FEATGYSVKYPVRHGIVEDW 253
+ G +A F + P + GIV DW
Sbjct: 67 RKLYTGSQALNFRRDQMEILSPTKDGIVTDW 97
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 295 LRAEPEDHHFLMTEPPLNTPENRE 366
L +P +H L+ EPPLN+ + RE
Sbjct: 112 LMIDPTEHPMLLAEPPLNSQQQRE 135
>At3g55120.1 68416.m06121 chalcone-flavanone isomerase / chalcone
isomerase (CHI) identical to SP|P41088
Length = 246
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 385 FESFNVPGLYIAVQAVLALAASWKSRTSAERT 480
F F V G+Y+ AV +L+ WK +T+ E T
Sbjct: 55 FVIFTVIGVYLEGNAVPSLSVKWKGKTTEELT 86
>At4g12870.1 68417.m02015 gamma interferon responsive lysosomal
thiol reductase family protein / GILT family protein
similar to SP|P13284 Gamma-interferon inducible
lysosomal thiol reductase precursor {Homo sapiens};
contains Pfam profile PF03227: Gamma interferon
inducible lysosomal thiol reductase (GILT)
Length = 229
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 241 DTVAHRILYRVSC-GFKSFITDEKIQIFDS 155
D V + Y C G +SFI DE +++FDS
Sbjct: 31 DKVELNLYYESLCPGCQSFIVDELVKVFDS 60
>At2g02640.1 68415.m00203 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 627
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +3
Query: 429 RSCFGCVMEVTYVC*THLHWHRK*TAEWRYSHCSSCRXICYWIMY 563
+ C C +E++Y T H + +++R+ HC CR +++Y
Sbjct: 143 KECVECPLEISYPTHTK-HSLQLFYSKYRFDHCIYCRKRATYMIY 186
>At2g02610.1 68415.m00200 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 627
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +3
Query: 429 RSCFGCVMEVTYVC*THLHWHRK*TAEWRYSHCSSCRXICYWIMY 563
+ C C +E++Y T H + +++R+ HC CR +++Y
Sbjct: 143 KECVECPLEISYPTHTK-HSLQLFYSKYRFDHCIYCRKRATYMIY 186
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,078,634
Number of Sequences: 28952
Number of extensions: 311855
Number of successful extensions: 804
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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