Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060241.seq
         (575 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein ...    30   0.062
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    24   3.1  
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         24   4.1  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    24   4.1  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    24   4.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   5.4  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   7.1  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   7.1  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   9.4  

>AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein
           protein.
          Length = 168

 Score = 29.9 bits (64), Expect = 0.062
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = +1

Query: 247 QGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 378
           QGGG Q    S+G+G+    +P + G G  +SG  +FGN  +GG
Sbjct: 121 QGGG-QGGIPSFGSGQQNGGVPFL-GNGQGQSGFPSFGNGQQGG 162


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 14/48 (29%), Positives = 19/48 (39%)
 Frame = +1

Query: 133 AGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGGHQTSAE 276
           +G +  PP+   G  P+GP      FY      A L   G  +   AE
Sbjct: 317 SGITGVPPIPADGPSPAGPYTNVPGFYSFGEVCAKLPNPGNANLKGAE 364


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
 Frame = -2

Query: 430 VDSDGANAXRASWGRTYVHHDTCYRRH-PDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDH 254
           VDSDGA       GR +   D    +  PD+T  Y  +G  E   +HV+  + +    D 
Sbjct: 23  VDSDGAQIFV---GRAHHAGDLLPAKVIPDKTAAYVAYGGQETLVEHVEVLVHKQLIWDT 79

Query: 253 LLAHAVGLPRVLGHRNVNIIDQVRTDGRLEHE 158
             A  V L  V+G    +   ++   GR  HE
Sbjct: 80  ASAGQVPLGAVVGGHTSD--GEILYVGRAYHE 109


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -3

Query: 555 CGXXTKGSSGNLFNNVPXSLNERWDA--GSSNG 463
           CG  TKG+SGN   +      + W+A  G++NG
Sbjct: 89  CG--TKGTSGNNGTDTSNGYKDVWNANSGATNG 119


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -3

Query: 555 CGXXTKGSSGNLFNNVPXSLNERWDA--GSSNG 463
           CG  TKG+SGN   +      + W+A  G++NG
Sbjct: 89  CG--TKGTSGNNGTDTSNGYKDVWNANSGATNG 119


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 358 RRHPDRTYEYHHHGH 314
           ++HP  +  +HHH H
Sbjct: 175 QQHPGHSQHHHHHHH 189


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
 Frame = -2

Query: 361 YRRHPDRTYEYHHH--GHAEFGRQHVQYPMIQ 272
           +  HP   + +HHH    A+    H Q+ +IQ
Sbjct: 498 HHAHPHHHHHHHHHHPTAADLAGYHHQHNVIQ 529


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 127 DGAGCSQAPPVRVQGAHPSGPG 192
           DG     +PP+ V G+  S PG
Sbjct: 153 DGLHSIPSPPITVSGSDMSSPG 174


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 151 PPVRVQGAHPSGPGQ 195
           PP+ +QG  P GP Q
Sbjct: 300 PPMPMQGGAPGGPPQ 314


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,550
Number of Sequences: 2352
Number of extensions: 11930
Number of successful extensions: 39
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)