Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060241.seq
         (575 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D23660-1|BAA04887.1|  427|Homo sapiens ribosomal protein protein.     133   4e-31
BC095427-1|AAH95427.1|  427|Homo sapiens ribosomal protein L4 pr...   133   4e-31
BC066925-1|AAH66925.1|  427|Homo sapiens ribosomal protein L4 pr...   133   4e-31
BC014653-1|AAH14653.1|  427|Homo sapiens ribosomal protein L4 pr...   133   4e-31
BC010151-1|AAH10151.1|  427|Homo sapiens ribosomal protein L4 pr...   133   4e-31
BC009888-1|AAH09888.1|  427|Homo sapiens ribosomal protein L4 pr...   133   4e-31
BC007996-1|AAH07996.1|  427|Homo sapiens ribosomal protein L4 pr...   133   4e-31
BC007748-1|AAH07748.1|  427|Homo sapiens ribosomal protein L4 pr...   133   4e-31
BC005817-1|AAH05817.1|  427|Homo sapiens ribosomal protein L4 pr...   133   4e-31
BC001365-1|AAH01365.1|  427|Homo sapiens ribosomal protein L4 pr...   133   4e-31
AB208977-1|BAD92214.1|  441|Homo sapiens ribosomal protein L4 va...   133   4e-31
AB061820-1|BAB79458.1|  427|Homo sapiens ribosomal protein L4 pr...   133   4e-31
AK223057-1|BAD96777.1|  427|Homo sapiens ribosomal protein L4 va...   132   6e-31
L20868-1|AAA60281.2|  426|Homo sapiens ribosomal protein L4 prot...   130   3e-30
M13149-1|AAA52694.1|  525|Homo sapiens HRG protein.                    31   2.2  
BC069574-1|AAH69574.1|  525|Homo sapiens histidine-rich glycopro...    31   2.2  
AB005803-1|BAA21613.1|  525|Homo sapiens histidine-rich glycopro...    31   2.2  
AF504925-1|AAM28881.1|  381|Homo sapiens basic helix-loop-helix ...    30   6.7  

>D23660-1|BAA04887.1|  427|Homo sapiens ribosomal protein protein.
          Length = 427

 Score =  133 bits (322), Expect = 4e-31
 Identities = 63/91 (69%), Positives = 71/91 (78%)
 Frame = +1

Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFXPTKPXRRWHRRCQPX 435
           GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF PTK  RRWHRR    
Sbjct: 59  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118

Query: 436 DSGERPWPAAVAATGVPALVXAXRNIIEKIP 528
                   +A+AA+ +PALV +  + IE++P
Sbjct: 119 QK-RYAICSALAASALPALVMSKGHRIEEVP 148



 Score = 74.1 bits (174), Expect = 3e-13
 Identities = 35/57 (61%), Positives = 44/57 (77%)
 Frame = +2

Query: 80  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>BC095427-1|AAH95427.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  133 bits (322), Expect = 4e-31
 Identities = 63/91 (69%), Positives = 71/91 (78%)
 Frame = +1

Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFXPTKPXRRWHRRCQPX 435
           GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF PTK  RRWHRR    
Sbjct: 59  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118

Query: 436 DSGERPWPAAVAATGVPALVXAXRNIIEKIP 528
                   +A+AA+ +PALV +  + IE++P
Sbjct: 119 QK-RYAICSALAASALPALVMSKGHRIEEVP 148



 Score = 74.1 bits (174), Expect = 3e-13
 Identities = 35/57 (61%), Positives = 44/57 (77%)
 Frame = +2

Query: 80  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>BC066925-1|AAH66925.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  133 bits (322), Expect = 4e-31
 Identities = 63/91 (69%), Positives = 71/91 (78%)
 Frame = +1

Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFXPTKPXRRWHRRCQPX 435
           GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF PTK  RRWHRR    
Sbjct: 59  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118

Query: 436 DSGERPWPAAVAATGVPALVXAXRNIIEKIP 528
                   +A+AA+ +PALV +  + IE++P
Sbjct: 119 QK-RYAICSALAASALPALVMSKGHRIEEVP 148



 Score = 74.1 bits (174), Expect = 3e-13
 Identities = 35/57 (61%), Positives = 44/57 (77%)
 Frame = +2

Query: 80  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>BC014653-1|AAH14653.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  133 bits (322), Expect = 4e-31
 Identities = 63/91 (69%), Positives = 71/91 (78%)
 Frame = +1

Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFXPTKPXRRWHRRCQPX 435
           GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF PTK  RRWHRR    
Sbjct: 59  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118

Query: 436 DSGERPWPAAVAATGVPALVXAXRNIIEKIP 528
                   +A+AA+ +PALV +  + IE++P
Sbjct: 119 QK-RYAICSALAASALPALVMSKGHRIEEVP 148



 Score = 74.1 bits (174), Expect = 3e-13
 Identities = 35/57 (61%), Positives = 44/57 (77%)
 Frame = +2

Query: 80  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>BC010151-1|AAH10151.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  133 bits (322), Expect = 4e-31
 Identities = 63/91 (69%), Positives = 71/91 (78%)
 Frame = +1

Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFXPTKPXRRWHRRCQPX 435
           GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF PTK  RRWHRR    
Sbjct: 59  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118

Query: 436 DSGERPWPAAVAATGVPALVXAXRNIIEKIP 528
                   +A+AA+ +PALV +  + IE++P
Sbjct: 119 QK-RYAICSALAASALPALVMSKGHRIEEVP 148



 Score = 74.1 bits (174), Expect = 3e-13
 Identities = 35/57 (61%), Positives = 44/57 (77%)
 Frame = +2

Query: 80  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>BC009888-1|AAH09888.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  133 bits (322), Expect = 4e-31
 Identities = 63/91 (69%), Positives = 71/91 (78%)
 Frame = +1

Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFXPTKPXRRWHRRCQPX 435
           GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF PTK  RRWHRR    
Sbjct: 59  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118

Query: 436 DSGERPWPAAVAATGVPALVXAXRNIIEKIP 528
                   +A+AA+ +PALV +  + IE++P
Sbjct: 119 QK-RYAICSALAASALPALVMSKGHRIEEVP 148



 Score = 74.1 bits (174), Expect = 3e-13
 Identities = 35/57 (61%), Positives = 44/57 (77%)
 Frame = +2

Query: 80  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>BC007996-1|AAH07996.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  133 bits (322), Expect = 4e-31
 Identities = 63/91 (69%), Positives = 71/91 (78%)
 Frame = +1

Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFXPTKPXRRWHRRCQPX 435
           GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF PTK  RRWHRR    
Sbjct: 59  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118

Query: 436 DSGERPWPAAVAATGVPALVXAXRNIIEKIP 528
                   +A+AA+ +PALV +  + IE++P
Sbjct: 119 QK-RYAICSALAASALPALVMSKGHRIEEVP 148



 Score = 74.1 bits (174), Expect = 3e-13
 Identities = 35/57 (61%), Positives = 44/57 (77%)
 Frame = +2

Query: 80  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>BC007748-1|AAH07748.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  133 bits (322), Expect = 4e-31
 Identities = 63/91 (69%), Positives = 71/91 (78%)
 Frame = +1

Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFXPTKPXRRWHRRCQPX 435
           GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF PTK  RRWHRR    
Sbjct: 59  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118

Query: 436 DSGERPWPAAVAATGVPALVXAXRNIIEKIP 528
                   +A+AA+ +PALV +  + IE++P
Sbjct: 119 QK-RYAICSALAASALPALVMSKGHRIEEVP 148



 Score = 74.1 bits (174), Expect = 3e-13
 Identities = 35/57 (61%), Positives = 44/57 (77%)
 Frame = +2

Query: 80  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>BC005817-1|AAH05817.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  133 bits (322), Expect = 4e-31
 Identities = 63/91 (69%), Positives = 71/91 (78%)
 Frame = +1

Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFXPTKPXRRWHRRCQPX 435
           GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF PTK  RRWHRR    
Sbjct: 59  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118

Query: 436 DSGERPWPAAVAATGVPALVXAXRNIIEKIP 528
                   +A+AA+ +PALV +  + IE++P
Sbjct: 119 QK-RYAICSALAASALPALVMSKGHRIEEVP 148



 Score = 74.1 bits (174), Expect = 3e-13
 Identities = 35/57 (61%), Positives = 44/57 (77%)
 Frame = +2

Query: 80  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>BC001365-1|AAH01365.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  133 bits (322), Expect = 4e-31
 Identities = 63/91 (69%), Positives = 71/91 (78%)
 Frame = +1

Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFXPTKPXRRWHRRCQPX 435
           GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF PTK  RRWHRR    
Sbjct: 59  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118

Query: 436 DSGERPWPAAVAATGVPALVXAXRNIIEKIP 528
                   +A+AA+ +PALV +  + IE++P
Sbjct: 119 QK-RYAICSALAASALPALVMSKGHRIEEVP 148



 Score = 74.1 bits (174), Expect = 3e-13
 Identities = 35/57 (61%), Positives = 44/57 (77%)
 Frame = +2

Query: 80  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>AB208977-1|BAD92214.1|  441|Homo sapiens ribosomal protein L4
           variant protein.
          Length = 441

 Score =  133 bits (322), Expect = 4e-31
 Identities = 63/91 (69%), Positives = 71/91 (78%)
 Frame = +1

Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFXPTKPXRRWHRRCQPX 435
           GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF PTK  RRWHRR    
Sbjct: 73  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 132

Query: 436 DSGERPWPAAVAATGVPALVXAXRNIIEKIP 528
                   +A+AA+ +PALV +  + IE++P
Sbjct: 133 QK-RYAICSALAASALPALVMSKGHRIEEVP 162



 Score = 74.5 bits (175), Expect = 2e-13
 Identities = 35/58 (60%), Positives = 45/58 (77%)
 Frame = +2

Query: 77  SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
           +++ ARPL+SVYSEK E+  G    LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 14  AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 70


>AB061820-1|BAB79458.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  133 bits (322), Expect = 4e-31
 Identities = 63/91 (69%), Positives = 71/91 (78%)
 Frame = +1

Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFXPTKPXRRWHRRCQPX 435
           GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF PTK  RRWHRR    
Sbjct: 59  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118

Query: 436 DSGERPWPAAVAATGVPALVXAXRNIIEKIP 528
                   +A+AA+ +PALV +  + IE++P
Sbjct: 119 QK-RYAICSALAASALPALVMSKGHRIEEVP 148



 Score = 74.1 bits (174), Expect = 3e-13
 Identities = 35/57 (61%), Positives = 44/57 (77%)
 Frame = +2

Query: 80  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>AK223057-1|BAD96777.1|  427|Homo sapiens ribosomal protein L4
           variant protein.
          Length = 427

 Score =  132 bits (320), Expect = 6e-31
 Identities = 63/91 (69%), Positives = 70/91 (76%)
 Frame = +1

Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFXPTKPXRRWHRRCQPX 435
           GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF PTK  RRWHRR    
Sbjct: 59  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118

Query: 436 DSGERPWPAAVAATGVPALVXAXRNIIEKIP 528
                   +A+AA+ +PALV    + IE++P
Sbjct: 119 QK-RYAICSALAASALPALVMPKGHRIEEVP 148



 Score = 74.1 bits (174), Expect = 3e-13
 Identities = 35/57 (61%), Positives = 44/57 (77%)
 Frame = +2

Query: 80  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSE 56


>L20868-1|AAA60281.2|  426|Homo sapiens ribosomal protein L4
           protein.
          Length = 426

 Score =  130 bits (314), Expect = 3e-30
 Identities = 62/91 (68%), Positives = 69/91 (75%)
 Frame = +1

Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFXPTKPXRRWHRRCQPX 435
           GHQT AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF PTK  RRWHRR    
Sbjct: 59  GHQTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118

Query: 436 DSGERPWPAAVAATGVPALVXAXRNIIEKIP 528
                   +A+AA+ +PALV +  + IE+ P
Sbjct: 119 QK-RYAICSALAASALPALVMSKGHRIEEFP 148



 Score = 76.2 bits (179), Expect = 8e-14
 Identities = 36/57 (63%), Positives = 45/57 (78%)
 Frame = +2

Query: 80  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
           ++VARPL+SVYSEK E+  G    LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSE 56


>M13149-1|AAA52694.1|  525|Homo sapiens HRG protein.
          Length = 525

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
 Frame = -2

Query: 376 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDHLLAH 242
           HH   +  H   T+  H HGH   G   H  +P   H  G H   H
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHCH 409


>BC069574-1|AAH69574.1|  525|Homo sapiens histidine-rich
           glycoprotein protein.
          Length = 525

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
 Frame = -2

Query: 376 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDHLLAH 242
           HH   +  H   T+  H HGH   G   H  +P   H  G H   H
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHCH 409


>AB005803-1|BAA21613.1|  525|Homo sapiens histidine-rich
           glycoprotein protein.
          Length = 525

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
 Frame = -2

Query: 376 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDHLLAH 242
           HH   +  H   T+  H HGH   G   H  +P   H  G H   H
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHCH 409


>AF504925-1|AAM28881.1|  381|Homo sapiens basic helix-loop-helix
           protein 5 protein.
          Length = 381

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 26/91 (28%), Positives = 33/91 (36%)
 Frame = +1

Query: 112 FREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGGHQTSAESWGTG 291
           FR    G   S APP R + A  S     C      E    LL   GGG   SA S G G
Sbjct: 35  FRSTPPGMDLSLAPPPRERPASSSSSPLGCFEPADPEGAGLLLPPPGGGGGGSAGSGGGG 94

Query: 292 RAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 384
                +P +  G     G  +  ++  G  +
Sbjct: 95  GGGVGVPGLLVGSAGVGGDPSLSSLPAGAAL 125


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,427,983
Number of Sequences: 237096
Number of extensions: 1789539
Number of successful extensions: 4482
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4418
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)