Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060240.seq
(671 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 112 2e-25
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 101 5e-22
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 82 5e-16
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 74 9e-14
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 73 3e-13
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 71 1e-12
08_01_0397 - 3509186-3510291,3510322-3512335 67 1e-11
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 64 1e-10
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 53 2e-07
02_01_0381 - 2764331-2764342,2768966-2769907 50 2e-06
03_05_0865 - 28365430-28367640 48 5e-06
06_03_1255 + 28780181-28781172,28782065-28782932 48 7e-06
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 45 5e-05
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 44 1e-04
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 44 1e-04
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 43 3e-04
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 43 3e-04
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 41 0.001
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 40 0.002
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 40 0.002
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 39 0.004
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 38 0.010
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 37 0.013
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 37 0.017
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 36 0.022
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 36 0.022
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 36 0.029
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 36 0.039
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 36 0.039
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 35 0.051
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 35 0.051
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 35 0.068
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 35 0.068
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 34 0.12
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 34 0.12
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 33 0.16
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 33 0.16
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 33 0.21
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 33 0.21
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 33 0.21
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 32 0.36
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 32 0.36
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 32 0.48
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 31 0.63
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 31 0.63
03_02_0189 - 6253659-6255380 31 1.1
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 31 1.1
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 31 1.1
02_01_0091 + 646299-649082 30 1.9
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 30 1.9
11_06_0739 + 26814463-26814809,26814891-26815217,26815458-26817636 29 2.6
08_01_0117 + 941334-941339,941720-941906,942444-942565,942648-94... 29 2.6
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 29 2.6
11_08_0102 - 28354880-28355056,28355159-28355376,28355634-283557... 29 3.4
03_01_0399 + 3097878-3098141,3098254-3098547,3098659-3098886,309... 29 4.5
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093 28 5.9
09_03_0167 + 12965030-12965356,12966100-12966387,12966704-129668... 28 7.8
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 112 bits (270), Expect = 2e-25
Identities = 60/141 (42%), Positives = 79/141 (56%)
Frame = +3
Query: 249 PRWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPD 428
P+ D SL PF KNFY P V S +V +YR + ++TV G +V P++YF+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 429 YVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT*ITNRLFG 608
Y Q + G+ EPTPIQ+QGWP+A+ R + + K L
Sbjct: 166 YCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLE 225
Query: 609 EVMVPIALVLAPTRELAQQIQ 671
+ PI L+LAPTRELA QIQ
Sbjct: 226 QGDGPIVLILAPTRELAVQIQ 246
Score = 60.9 bits (141), Expect = 9e-10
Identities = 22/38 (57%), Positives = 33/38 (86%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 622
G++++G+AQTGSGKTL+Y+LP +VH+ QP + +GDGP
Sbjct: 193 GRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGP 230
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 101 bits (242), Expect = 5e-22
Identities = 57/146 (39%), Positives = 76/146 (52%)
Frame = +3
Query: 234 AEHATPRWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEE 413
A+ A D L F KNFY P+V + EVE YR + E+TV G +V P++ F +
Sbjct: 36 ADSAAAAADLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRD 95
Query: 414 ANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT*IT 593
FP+YV Q + G+ EPTPIQ+QGWP+A+ R + + K +
Sbjct: 96 VGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNA 155
Query: 594 NRLFGEVMVPIALVLAPTRELAQQIQ 671
+ PI LVLAPTRELA QIQ
Sbjct: 156 QPILAPGDGPIVLVLAPTRELAVQIQ 181
Score = 64.5 bits (150), Expect = 7e-11
Identities = 26/38 (68%), Positives = 34/38 (89%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 622
G++L+G+A+TGSGKTLAY+LPAIVH+N QP + GDGP
Sbjct: 128 GRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGP 165
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 81.8 bits (193), Expect = 5e-16
Identities = 46/136 (33%), Positives = 67/136 (49%)
Frame = +3
Query: 261 SVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQ 440
++ +PFNK+FY+ P+V S EV +Y + VSG +V PI+ F + FP +
Sbjct: 173 TIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMN 232
Query: 441 GVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT*ITNRLFGEVMV 620
+ GY++PT IQ Q PI +S R + K K + + +
Sbjct: 233 AIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEG 292
Query: 621 PIALVLAPTRELAQQI 668
PI +V APTRELA QI
Sbjct: 293 PIGVVCAPTRELAHQI 308
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 74.1 bits (174), Expect = 9e-14
Identities = 51/138 (36%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Frame = +3
Query: 267 SLQPFNKNFYDPH-PTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQG 443
S++P ++ F P+ P++ + YR HEVT G V P FE FP + Q
Sbjct: 564 SMRPPSRMFAPPNFPSIAS-----ADAYRQHHEVTAVGENVPPPFMTFEATGFPPEILQE 618
Query: 444 VKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT*ITNRLF--GEVM 617
+ G+ PTPIQAQ WP+A+ R +A K K T + I R + ++
Sbjct: 619 IHAAGFLNPTPIQAQTWPVALQNRDIVAIAKTGSGK---TLGYLIPAFIHLRRYQNNPML 675
Query: 618 VPIALVLAPTRELAQQIQ 671
P LVLAPTRELA QIQ
Sbjct: 676 GPTVLVLAPTRELASQIQ 693
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 72.5 bits (170), Expect = 3e-13
Identities = 45/112 (40%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +3
Query: 339 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI 518
E YR KHE+T+ G E P F+ FP + + V+ G+ PTPIQAQ WPIA+ R
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRD 219
Query: 519 *LA*PKRVPAKRWPTSCQQLCT*ITNRL-FGEVMVPIALVLAPTRELAQQIQ 671
+A K K + RL P LVL+PTRELA QIQ
Sbjct: 220 IVAVAKTGSGKTLGYLIPGFI--LLKRLQHNSRDGPTVLVLSPTRELATQIQ 269
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCFGLGAYQRVST 661
+++V VA+TGSGKTL Y++P + + R DGP L + ++T
Sbjct: 218 RDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLSPTRELAT 266
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 70.5 bits (165), Expect = 1e-12
Identities = 44/110 (40%), Positives = 55/110 (50%)
Frame = +3
Query: 339 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI 518
E YR++HE+TV G V PI FE FP + + ++ G+ PTPIQAQ WPIA+ +
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQD 189
Query: 519 *LA*PKRVPAKRWPTSCQQLCT*ITNRLFGEVMVPIALVLAPTRELAQQI 668
+A K K I P LVLAPTRELA QI
Sbjct: 190 VVAIAKTGSGKTLGYLLPGFMH-IKRLQNNPRSGPTVLVLAPTRELATQI 238
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCFGLGAYQRVST 661
+++V +A+TGSGKTL Y+LP +HI R GP L + ++T
Sbjct: 188 QDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPR-SGPTVLVLAPTRELAT 236
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 67.3 bits (157), Expect = 1e-11
Identities = 44/135 (32%), Positives = 63/135 (46%)
Frame = +3
Query: 264 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQG 443
+ QPF KNFY + K + EV YR + E+ V G +V PI+ + ++ +
Sbjct: 379 IDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDT 438
Query: 444 VKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT*ITNRLFGEVMVP 623
+K +G+++P IQAQ PI MS R + K K L P
Sbjct: 439 IKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPAVVPGDGP 498
Query: 624 IALVLAPTRELAQQI 668
I L++APTREL QI
Sbjct: 499 IGLIMAPTRELVVQI 513
Score = 54.4 bits (125), Expect = 8e-08
Identities = 20/38 (52%), Positives = 31/38 (81%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 622
G++ +G+A+TGSGKTLA++LP + H+ +QP + GDGP
Sbjct: 461 GRDCIGIAKTGSGKTLAFVLPMLRHVKDQPAVVPGDGP 498
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 64.1 bits (149), Expect = 1e-10
Identities = 43/135 (31%), Positives = 61/135 (45%)
Frame = +3
Query: 264 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQG 443
+ QPF KN Y + + EV YR E+ V G +V PI+ + ++ +
Sbjct: 240 IEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDT 299
Query: 444 VKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT*ITNRLFGEVMVP 623
+K +G+++P PIQAQ PI MS R + K K L P
Sbjct: 300 IKKLGFEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPPVVPGDGP 359
Query: 624 IALVLAPTRELAQQI 668
I L++APTREL QI
Sbjct: 360 IGLIMAPTRELVVQI 374
Score = 57.6 bits (133), Expect = 8e-09
Identities = 21/38 (55%), Positives = 32/38 (84%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 622
G++ +G+A+TGSGKTLA++LP + H+ +QPP+ GDGP
Sbjct: 322 GRDCIGIAKTGSGKTLAFVLPMLRHVKDQPPVVPGDGP 359
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Frame = +3
Query: 333 EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSE 512
++ R+K ++ V G +V +PI F + P+ + ++ GY PTP+Q Q P ++
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICN 219
Query: 513 RI*LA*PKRVPAK--RWPTSCQQLCT*ITNRLFGEVMVPIALVLAPTRELAQQIQ 671
R L K + C+ + + + P+A+VLAPTREL Q++
Sbjct: 220 RSLLVSADTGSGKTASFLVPIIAHCSHVRSERCTDKQGPLAIVLAPTRELCLQVE 274
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Frame = +3
Query: 306 PTVLKRSPY-EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 482
P L+R P + +E R K + V G +V P + F + P+ + + ++ G +PTPIQ
Sbjct: 150 PLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQ 209
Query: 483 AQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT*ITNRLFGEVMV---PIALVLAPTRE 653
QG P+ +S R + K + + + ++ P +++ P+RE
Sbjct: 210 VQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRE 269
Query: 654 LAQQ 665
LA+Q
Sbjct: 270 LAKQ 273
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/46 (45%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAI-VHINNQ--PPIRRGDGPDCFGL 637
G++++G+A TGSGKTL ++LP I V + + PI G+GP FG+
Sbjct: 219 GRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGP--FGM 262
>03_05_0865 - 28365430-28367640
Length = 736
Score = 48.4 bits (110), Expect = 5e-06
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Frame = +3
Query: 345 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*L 524
+R ++ G +V P++ + E+ + + V+ GYKEP+PIQ P+ + +R +
Sbjct: 297 FREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVI 356
Query: 525 A*PKRVPAKRWPTSCQQLCT*ITN----RLFGEVMVPIALVLAPTRELAQQIQ 671
+ K + + IT E P A+V+APTRELAQQI+
Sbjct: 357 GIAETGSGKT-AAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIE 408
Score = 41.9 bits (94), Expect = 4e-04
Identities = 15/31 (48%), Positives = 25/31 (80%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHINNQPPI 604
++++G+A+TGSGKT A++LP + +I PPI
Sbjct: 353 RDVIGIAETGSGKTAAFVLPMLSYITRLPPI 383
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 48.0 bits (109), Expect = 7e-06
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Frame = +3
Query: 306 PTVLKRSPYE-VEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 482
P L+R P + R + V G +V P + F + P+ + + ++ G ++PTPIQ
Sbjct: 141 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 200
Query: 483 AQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT*ITNRLFGEVMV---PIALVLAPTRE 653
QG P+A+S R + K + + + ++ P L++ P+RE
Sbjct: 201 VQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGEGPFGLIVCPSRE 260
Query: 654 LAQQ 665
LA+Q
Sbjct: 261 LARQ 264
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +2
Query: 446 KDNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGD 616
+ G+++ L + G++++G+A TGSGKTL ++LP I+ + PI G+
Sbjct: 189 RGKGIEKPTPIQVQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGE 248
Query: 617 GPDCFGL 637
GP FGL
Sbjct: 249 GP--FGL 253
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 45.2 bits (102), Expect = 5e-05
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Frame = +3
Query: 363 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PK-- 536
V SG +V P+ F E + D + + ++ Y +PTP+Q PI+++ R +A +
Sbjct: 225 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 284
Query: 537 --RVPAKRWPTSCQQLCT*ITNRLFG-EVMVPIALVLAPTRELAQQI 668
+ A +P + + R G P+AL+L+PTREL+ QI
Sbjct: 285 SGKTAAFCFPIISGIMSSRPPQRPRGSRTAYPLALILSPTRELSVQI 331
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 500 SYVGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 619
S G++L+ AQTGSGKT A+ P I I + P +R G
Sbjct: 271 SIAGRDLMACAQTGSGKTAAFCFPIISGIMSSRPPQRPRG 310
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/34 (50%), Positives = 28/34 (82%)
Frame = +2
Query: 503 YVGKNLVGVAQTGSGKTLAYILPAIVHINNQPPI 604
Y+GK+++ A+TG+GKT+A++LPAI ++ PPI
Sbjct: 490 YIGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPI 523
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 43.6 bits (98), Expect = 1e-04
Identities = 38/113 (33%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Frame = +3
Query: 363 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRV 542
V VSG +V P FE A + V + V GY+ PTP+Q PIA++ R +A +
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMACAQTG 131
Query: 543 PAKRWPTSCQQLCT*IT-----------NRLFGEVMV-PIALVLAPTRELAQQ 665
K C + + + F P ALVLAPTRELA Q
Sbjct: 132 SGKT-AAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTRELAAQ 183
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAI 577
G++L+ AQTGSGKT A+ LP +
Sbjct: 121 GRDLMACAQTGSGKTAAFCLPVV 143
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +3
Query: 348 RNKHEVTVSGVEVHNPIQYFEEA----NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
R K ++ +SG V P++ FEE Y+ + +G++EPTPIQ Q PI +S R
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGR 184
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHI 586
G+ A TGSGKTLA++ P ++ I
Sbjct: 183 GRECFACAPTGSGKTLAFLFPILMKI 208
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 42.7 bits (96), Expect = 3e-04
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Frame = +3
Query: 363 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRV 542
V SG +V P F E + D + + ++ Y +PTP+Q PI+++ R +A +
Sbjct: 311 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 370
Query: 543 PAKRWPTSCQQLCT*ITN-----RLFG-EVMVPIALVLAPTRELAQQI 668
K C + + I R G P+AL+L+PTREL+ QI
Sbjct: 371 SGKT-AAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRELSVQI 417
Score = 35.9 bits (79), Expect = 0.029
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 500 SYVGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRRG 613
S G++L+ AQTGSGKT A+ P I I + PP RG
Sbjct: 357 SIAGRDLMACAQTGSGKTAAFCFPIISGIMRSRPPPRSRG 396
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +2
Query: 446 KDNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 610
KD G +R + L GK+++ A+TG+GKT+A++LPAI ++ P RR
Sbjct: 22 KDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRR 76
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Frame = +3
Query: 363 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRV 542
V SG EV P+ F E + + ++ Y PTP+Q PI+++ R +A +
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTG 202
Query: 543 PAKRWPTSCQQLCT*I--------TNRLFGEVMVPIALVLAPTRELAQQI 668
K C + + I R P+AL+L+PTREL+ QI
Sbjct: 203 SGKT-AAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPTRELSMQI 251
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2
Query: 500 SYVGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 610
S G++L+ AQTGSGKT A+ P I I PP +R
Sbjct: 189 SLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQR 225
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/96 (34%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQ 572
P+ F P V K G++ P+PIQA WP + R + K
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVP 149
Query: 573 QLCT*ITNRLFGEVM----VPIALVLAPTRELAQQI 668
L R GE VP LVL+PTRELAQQI
Sbjct: 150 ALMH--VRRKMGEKSAKKGVPRVLVLSPTRELAQQI 183
Score = 39.1 bits (87), Expect = 0.003
Identities = 13/29 (44%), Positives = 24/29 (82%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQ 595
G++ +G+A TGSGKT+A+ +PA++H+ +
Sbjct: 129 GRDFIGIAATGSGKTIAFGVPALMHVRRK 157
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/23 (65%), Positives = 22/23 (95%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAI 577
GK+++G A+TGSGKTLA+++PAI
Sbjct: 133 GKDVMGAAKTGSGKTLAFLIPAI 155
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 428 LCATRCKDNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPP 601
LCA G Q + + + G++++ A TG+GKTLAY+ P IVH+ +P
Sbjct: 34 LCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAP-IVHLLQMREPR 92
Query: 602 IRRGDG 619
+ R DG
Sbjct: 93 VERTDG 98
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 443 CKDNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQP 598
C G++ A + + G++++G+A+TGSGKT A+ LP + + P
Sbjct: 92 CDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILHRLGEDP 143
Score = 27.9 bits (59), Expect = 7.8
Identities = 27/88 (30%), Positives = 40/88 (45%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT 584
F E ++ ++G + PT +Q + P A+ R L + K T+ L
Sbjct: 79 FAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGK---TAAFALP- 134
Query: 585 *ITNRLFGEVMVPIALVLAPTRELAQQI 668
I +RL + AL LAPTRELA Q+
Sbjct: 135 -ILHRLGEDPYGVAALALAPTRELAAQL 161
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 36.7 bits (81), Expect = 0.017
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 494 ADSYVGKNLVGVAQTGSGKTLAYILPAI 577
A ++ GK+++G A+TGSGKTLA+ LP +
Sbjct: 175 AAAHQGKDVIGAAETGSGKTLAFGLPIL 202
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 444 VKTMGYKEPTPIQAQGWPIA 503
V+ +G+KEPTPIQ +P A
Sbjct: 157 VRRLGFKEPTPIQKACFPAA 176
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 36.3 bits (80), Expect = 0.022
Identities = 13/30 (43%), Positives = 24/30 (80%)
Frame = +2
Query: 491 LADSYVGKNLVGVAQTGSGKTLAYILPAIV 580
L + G++++G A+TGSGKTLA+++P ++
Sbjct: 111 LPHALCGRDVLGAAKTGSGKTLAFVIPVLM 140
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +2
Query: 446 KDNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQP 598
KD G ++ + L G++++ A+TG+GKT+A++LPAI ++ P
Sbjct: 90 KDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAIELLSTLP 140
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 35.9 bits (79), Expect = 0.029
Identities = 29/97 (29%), Positives = 51/97 (52%)
Frame = +3
Query: 381 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWP 560
EVH + F++ + + +G+ G+++P+ IQ +G + + + + + +
Sbjct: 38 EVH---ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGI-VPFCKGLDVIQQAQSGTGKTA 93
Query: 561 TSCQQLCT*ITNRLFGEVMVPIALVLAPTRELAQQIQ 671
T C+ I +L V+ ALVLAPTRELAQQI+
Sbjct: 94 T----FCSGILQQLDYAVVECQALVLAPTRELAQQIE 126
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 35.5 bits (78), Expect = 0.039
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT 584
F E N + + + +GY++PTPIQA P+A++ R K T+ L
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGK---TAAFSLPV 252
Query: 585 *ITNRLFGEVMVPI--ALVLAPTRELAQQI 668
+ LF VP L+L PTRELA Q+
Sbjct: 253 -LERLLFRPKRVPAIRVLILTPTRELAAQV 281
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 443 CKDNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQP 598
C+ G Q+ ++ + + G+++ G A TGSGKT A+ LP + + +P
Sbjct: 209 CEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRP 260
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 35.5 bits (78), Expect = 0.039
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAI 577
G++++GV QTGSGKT A+ LP I
Sbjct: 20 GRDVIGVGQTGSGKTAAFALPII 42
Score = 27.9 bits (59), Expect = 7.8
Identities = 29/74 (39%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +3
Query: 453 MGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT*ITNRLFGEVMVP--I 626
MG+K PT IQA+ P A+ R + + K T+ L I L P
Sbjct: 1 MGWKAPTRIQAEVIPFALQGRDVIGVGQTGSGK---TAAFALP--IIQALLEHEHRPCFF 55
Query: 627 ALVLAPTRELAQQI 668
A VLAPTRELA QI
Sbjct: 56 ACVLAPTRELAIQI 69
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 35.1 bits (77), Expect = 0.051
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINN 592
G +LVG A+TG GKTLA++LP + + N
Sbjct: 141 GHDLVGRARTGQGKTLAFVLPILESLVN 168
>01_06_0020 +
25630728-25631023,25631308-25631548,25631629-25631709,
25632109-25632216,25632329-25632448,25632806-25632943,
25633064-25633150,25633802-25633915
Length = 394
Score = 35.1 bits (77), Expect = 0.051
Identities = 36/121 (29%), Positives = 58/121 (47%)
Frame = +3
Query: 309 TVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 488
T +R P +++ E T GVEV I F++ D + +G+ G+++P+ IQ +
Sbjct: 5 TTSRRGPGAMDDENLTFE-TSPGVEV---ISSFDQMGIRDDLLRGIYAYGFEKPSAIQQR 60
Query: 489 GWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT*ITNRLFGEVMVPIALVLAPTRELAQQI 668
+S R +A + K S +C I + EV AL+L+PTRELA Q
Sbjct: 61 AVLPIISGRDVIAQAQSGTGKTSMISLS-VCQ-IVDTAVREVQ---ALILSPTRELAAQT 115
Query: 669 Q 671
+
Sbjct: 116 E 116
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 34.7 bits (76), Expect = 0.068
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAI 577
GK++V A+TGSGKT AY+LP +
Sbjct: 120 GKDVVAKAKTGSGKTFAYLLPML 142
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT 584
F+E + +++ ++ G + TPIQ + P+ + + +A K K + L
Sbjct: 85 FDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVVAKAKTGSGKTFAYLLPMLHE 144
Query: 585 *ITNRLFGEVM--VPIALVLAPTRELAQQI 668
+ G + P +L PTREL QQ+
Sbjct: 145 LLKLSAEGRIRKSAPNVFILVPTRELCQQV 174
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 34.7 bits (76), Expect = 0.068
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 443 CKDNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAI 577
C G + + + + G++L+G+ QTGSGKT A+ LP I
Sbjct: 56 CDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPII 100
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 33.9 bits (74), Expect = 0.12
Identities = 25/87 (28%), Positives = 42/87 (48%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT 584
FE + V +GV+ GY+ PTPIQ + P+ ++ +A R + + +
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHD-IAAMARTGSGKTAAFLVPMIQ 86
Query: 585 *ITNRLFGEVMVPIALVLAPTRELAQQ 665
+ G + AL+L+PTR+LA Q
Sbjct: 87 RLRRHDAGAGI--RALILSPTRDLATQ 111
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAI 577
G ++ +A+TGSGKT A+++P I
Sbjct: 63 GHDIAAMARTGSGKTAAFLVPMI 85
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +2
Query: 506 VGKNLVGVAQTGSGKTLAYILPAI 577
+G +++ A+TGSGKTLA+++PAI
Sbjct: 122 LGSDVMASAKTGSGKTLAFLIPAI 145
>03_05_0052 -
20293197-20293310,20293938-20294024,20294133-20294270,
20295009-20295128,20295236-20295343,20296053-20296133,
20296216-20296456,20297010-20297305
Length = 394
Score = 33.5 bits (73), Expect = 0.16
Identities = 35/121 (28%), Positives = 58/121 (47%)
Frame = +3
Query: 309 TVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 488
T +R P +++ E T GVEV I F++ + + +G+ G+++P+ IQ +
Sbjct: 5 TTSRRGPGAMDDENLTFE-TSPGVEV---ISSFDQMGIREDLLRGIYAYGFEKPSAIQQR 60
Query: 489 GWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT*ITNRLFGEVMVPIALVLAPTRELAQQI 668
+S R +A + K S +C I + EV AL+L+PTRELA Q
Sbjct: 61 AVLPIISGRDVIAQAQSGTGKTSMISLS-VCQ-IVDTAVREVQ---ALILSPTRELAAQT 115
Query: 669 Q 671
+
Sbjct: 116 E 116
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 449 DNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINN 592
D G +T + L GK+++ A+TG+GK+ A++LPAI + N
Sbjct: 359 DAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAIESVLN 406
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/32 (53%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAY---ILPAIVHINNQ 595
GK++VG A+TG+GKTLA+ IL AI+ N +
Sbjct: 135 GKDMVGRAKTGTGKTLAFGIPILDAIIRHNEK 166
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/17 (70%), Positives = 17/17 (100%)
Frame = +3
Query: 621 PIALVLAPTRELAQQIQ 671
P+A+VLAPTRELA+Q++
Sbjct: 173 PLAIVLAPTRELAKQVE 189
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/87 (28%), Positives = 38/87 (43%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT 584
FE+ + G+ G++ P+PIQ + PIA++ LA AK C
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILA-----RAKNGTGKTAAFCI 203
Query: 585 *ITNRLFGEVMVPIALVLAPTRELAQQ 665
++ E ++L PTRELA Q
Sbjct: 204 PALEKIDPEKNAIQVVILVPTRELALQ 230
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +2
Query: 449 DNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHIN 589
+ G +R + + G +++ A+ G+GKT A+ +PA+ I+
Sbjct: 164 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKID 210
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/87 (28%), Positives = 38/87 (43%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT 584
FE+ + G+ G++ P+PIQ + PIA++ LA AK C
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILA-----RAKNGTGKTAAFCI 190
Query: 585 *ITNRLFGEVMVPIALVLAPTRELAQQ 665
++ E ++L PTRELA Q
Sbjct: 191 PALEKIDQEKNAIQVVILVPTRELALQ 217
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +2
Query: 449 DNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQ 595
+ G +R + + G +++ A+ G+GKT A+ +PA+ I+ +
Sbjct: 151 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQE 199
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHI 586
GK+++G A+TG+GKTLA+ +P + I
Sbjct: 130 GKDMIGRARTGTGKTLAFGIPIMDRI 155
Score = 31.1 bits (67), Expect = 0.84
Identities = 11/17 (64%), Positives = 17/17 (100%)
Frame = +3
Query: 621 PIALVLAPTRELAQQIQ 671
P+A++LAPTRELA+Q++
Sbjct: 168 PLAIILAPTRELARQVE 184
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 32.3 bits (70), Expect = 0.36
Identities = 24/89 (26%), Positives = 47/89 (52%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT 584
F++ + + +G+ G+++P+ IQ +G + + + + + + T C+
Sbjct: 43 FDDMGLQENLLRGIYAYGFEKPSAIQQRGI-VPFCKGLDVIQQAQSGTGKTAT----FCS 97
Query: 585 *ITNRLFGEVMVPIALVLAPTRELAQQIQ 671
I +L ++ +LVLAPTRELAQQI+
Sbjct: 98 GILQQLDYGLVECQSLVLAPTRELAQQIE 126
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 31.9 bits (69), Expect = 0.48
Identities = 24/87 (27%), Positives = 38/87 (43%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT 584
FE+ + G+ G++ P+PIQ + PIA++ LA AK C
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILA-----RAKNGTGKTAAFCI 180
Query: 585 *ITNRLFGEVMVPIALVLAPTRELAQQ 665
++ + ++L PTRELA Q
Sbjct: 181 PALEKIDQDKNAIQVVILVPTRELALQ 207
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +2
Query: 449 DNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHIN 589
+ G +R + + G +++ A+ G+GKT A+ +PA+ I+
Sbjct: 141 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKID 187
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGP 622
G++L+ A+TG+GKTLA+ +P I + + +RRG P
Sbjct: 167 GRDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIP 207
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 618 VPIALVLAPTRELAQQIQ 671
+P LVLAPTRELA+Q++
Sbjct: 206 IPRVLVLAPTRELAKQVE 223
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAI-VHINN 592
G ++V + TGSGKTLAY+LP + + I N
Sbjct: 147 GTSVVLGSHTGSGKTLAYLLPLVQIEIEN 175
>03_02_0189 - 6253659-6255380
Length = 573
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 536 TGSGKTLAYILPAIVHINNQPPIRRGDGPD 625
TGSGKTLAY+LP + I DG D
Sbjct: 177 TGSGKTLAYLLPILSEIGPLKRPTEQDGSD 206
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQ 595
GK+ + Q+GSGKTLAY+ P + ++ +
Sbjct: 277 GKSCIIGDQSGSGKTLAYLCPVVQNLRKE 305
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 446 KDNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQP 598
K G +R ++ + K++ A TGSGKTLA+++P + + +P
Sbjct: 39 KGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRRRP 89
>02_01_0091 + 646299-649082
Length = 927
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 455 GLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHIN 589
G+ + AH + + + G+++V T SGK+L Y +P + I+
Sbjct: 184 GVTKLYAHQAQAVQSAVSGEHVVVSTSTSSGKSLCYNIPVLESIS 228
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYIL 568
G++ + AQTGSGKTLAY+L
Sbjct: 78 GQDCILHAQTGSGKTLAYLL 97
>11_06_0739 + 26814463-26814809,26814891-26815217,26815458-26817636
Length = 950
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +2
Query: 428 LCATRCKDNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQP 598
LCA C+D G T H ++ + K L+G + SG L+ +L + NN P
Sbjct: 333 LCAKLCRDLGSHLTGNHGHDNFSE--LRKVLLGNYDSFSGSALSCLLYLGIFPNNHP 387
>08_01_0117 +
941334-941339,941720-941906,942444-942565,942648-942656,
942965-943067,943204-943247,943487-943516,943615-943737,
943816-943841,943934-944015,944137-944178,944259-944292,
944424-944451,944779-945022,945023-945124,945318-945443,
945533-945715,945803-945961
Length = 549
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query: 491 LADSYVGKN--LVGVAQTGSGKTLAYILPAIVHINNQ 595
+AD+ G N ++ QTG+GKT + P+I+H N Q
Sbjct: 141 VADAISGINGTIITYGQTGAGKTYSMEGPSILHCNKQ 177
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2
Query: 536 TGSGKTLAYILPAIVHINNQPPIRR 610
TGSGKTLAY+LP + I P++R
Sbjct: 639 TGSGKTLAYLLPILSEIG---PLKR 660
>11_08_0102 -
28354880-28355056,28355159-28355376,28355634-28355712,
28356451-28356519,28356602-28356681,28356818-28356925,
28357103-28357169,28357894-28357959,28358042-28358119,
28358198-28358250,28359542-28359575,28359851-28359865,
28360082-28360109,28360628-28360716,28361688-28361810,
28362192-28362296,28362381-28362485,28362924-28363139,
28364656-28364845,28365193-28365418,28366096-28366162
Length = 730
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVH 583
G++++ + G GK+L Y LPA++H
Sbjct: 120 GRDVLVIMAAGGGKSLCYQLPAVLH 144
>03_01_0399 +
3097878-3098141,3098254-3098547,3098659-3098886,
3099148-3099224,3099501-3099540,3099737-3099802,
3100305-3100706,3100777-3100888,3101445-3101530,
3101607-3101672
Length = 544
Score = 28.7 bits (61), Expect = 4.5
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +3
Query: 360 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKT-MGYKEPTPIQAQGWPIAMSERI*LA*PK 536
+ SG V+ FE+ + +G+ MG+ P+ IQA P+ ++ K
Sbjct: 87 QAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMILTPPY-----K 141
Query: 537 RVPAKRWPTSCQQLCT*I--TNRLFGEVMVPIALVLAPTRELAQQ 665
+ A+ S + C + +R+ V A+ + PTRELAQQ
Sbjct: 142 DLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQ 186
>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
Length = 1040
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 324 SPYEVEEYRNKHEVTVSGVEVHN 392
SP +EE N E+ V GV++HN
Sbjct: 431 SPQMIEEMNNVRELNVKGVKLHN 453
>09_03_0167 +
12965030-12965356,12966100-12966387,12966704-12966826,
12967229-12967611,12967863-12968190,12968324-12968353,
12968837-12968989,12969510-12969815
Length = 645
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 455 GLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAI 577
GL R ++ + +++ A+TGSGKT Y++P I
Sbjct: 101 GLARPSLVQAACIPHVLTTNDVIVAAETGSGKTHGYLVPLI 141
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,330,615
Number of Sequences: 37544
Number of extensions: 373070
Number of successful extensions: 1065
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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