Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060240.seq
(671 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 5e-16
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 60 1e-09
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 58 5e-09
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 58 6e-09
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 56 3e-08
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 48 9e-06
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 40 0.002
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 36 0.039
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 34 0.091
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 33 0.16
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 33 0.21
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 33 0.21
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 33 0.28
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 32 0.37
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 32 0.48
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 32 0.48
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 31 0.84
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 30 1.5
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 30 1.5
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07) 29 2.6
SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 29 3.4
SB_22560| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 28 7.9
SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08) 28 7.9
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 81.8 bits (193), Expect = 5e-16
Identities = 47/140 (33%), Positives = 66/140 (47%)
Frame = +3
Query: 249 PRWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPD 428
P + +PFNKNFY+ HP + K+S E+++ R K + VSG P F F +
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526
Query: 429 YVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT*ITNRLFG 608
+ ++ + Y +PT IQ Q PIA+S R + K K L +
Sbjct: 527 QMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQ 586
Query: 609 EVMVPIALVLAPTRELAQQI 668
PI L+ APTREL QQI
Sbjct: 587 VGDGPIVLICAPTRELCQQI 606
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +3
Query: 321 RSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 488
R +EV+ YR ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
Score = 36.3 bits (80), Expect = 0.022
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 560 YILPAIVHINNQPPIRRGDGP 622
+ILP IVHIN+QP ++ GDGP
Sbjct: 113 FILPGIVHINHQPLLQPGDGP 133
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 621 PIALVLAPTRELAQQIQ 671
PI LVL PTRELAQQ+Q
Sbjct: 133 PIVLVLCPTRELAQQVQ 149
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 58.4 bits (135), Expect = 5e-09
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Frame = +3
Query: 345 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*L 524
+R ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + R +
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
Query: 525 A*PKRVPAKRWPTSCQQLCT*I----TNRLFGEVMVPIALVLAPTRELAQQIQ 671
+ K + L + R P AL+LAPTRELAQQI+
Sbjct: 143 GVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIE 195
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPD 625
++++GVA+TGSGKT A+ +P +V I P I R + D
Sbjct: 139 RDIIGVAETGSGKTAAFAIPLLVWIMGLPKIERDNDAD 176
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 58.0 bits (134), Expect = 6e-09
Identities = 38/130 (29%), Positives = 58/130 (44%)
Frame = +3
Query: 279 FNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 458
F ++YD + V + S V+E R K+ + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 459 YKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT*ITNRLFGEVMVPIALVL 638
++ PTPIQ Q MS R + + K S T P+AL+L
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALIL 151
Query: 639 APTRELAQQI 668
PTREL QQ+
Sbjct: 152 TPTRELMQQV 161
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 58.0 bits (134), Expect = 6e-09
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Frame = +3
Query: 339 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI 518
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI ++ R
Sbjct: 692 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRD 750
Query: 519 *LA*PK----RVPAKRWPTSCQQLCT*ITNRLFGEVMVPIALVLAPTRELAQQI 668
+A + + A P + +T+ F E P A+ +APTRELA QI
Sbjct: 751 VMACAQTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQI 804
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 57.2 bits (132), Expect = 1e-08
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Frame = +3
Query: 261 SVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQ 437
+V QPF K+FY P + K +P E +E+R E + V G P++ + + +
Sbjct: 58 TVVYQPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKIL 117
Query: 438 QGVKTMGYKEPTPIQAQGWPIAMSERI*LA---*PKRVPAKRWPTSCQQLC 581
+K Y++PTPIQAQ P+ MS R +A P R A + C++ C
Sbjct: 118 DVLKKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFC 168
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +3
Query: 294 YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 473
Y HPT+ + +V++ R+K E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 474 PIQAQGWPIAMSER 515
PIQ Q P+ +S R
Sbjct: 221 PIQMQVLPVLLSGR 234
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 51.6 bits (118), Expect = 6e-07
Identities = 34/100 (34%), Positives = 46/100 (46%)
Frame = +3
Query: 369 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPA 548
VSG I F E F + + + GY+ PTP+Q PI M+ R +A +
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528
Query: 549 KRWPTSCQQLCT*ITNRLFGEVMVPIALVLAPTRELAQQI 668
K L + I L P+AL +APTRELA+QI
Sbjct: 529 KTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQI 568
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 455 GLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQ 595
G +R + L G++L+ AQTGSGKT AY+LP + + Q
Sbjct: 498 GYRRPTPVQKAALPIVMAGRDLMACAQTGSGKTAAYMLPVLTSLIKQ 544
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 47.6 bits (108), Expect = 9e-06
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = +3
Query: 333 EVEEYRNKHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
++ +R++ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +3
Query: 339 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI ++ R
Sbjct: 115 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGR 172
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 446 KDNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAI 577
KD G +A G++L+G A+TGSGKTLA+++P +
Sbjct: 588 KDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVV 631
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 36.3 bits (80), Expect = 0.022
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHI 586
++++G A+TGSGKTLA+ +P I HI
Sbjct: 169 RDIIGAAETGSGKTLAFGIPIIQHI 193
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 35.5 bits (78), Expect = 0.039
Identities = 13/23 (56%), Positives = 21/23 (91%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAI 577
G++++G A+TGSGKTLA+++P I
Sbjct: 87 GRDVLGAAKTGSGKTLAFLIPII 109
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 34.3 bits (75), Expect = 0.091
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 446 KDNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHI-NNQPPIRRGDGP 622
+D G+ +S Y G++++G A+TG+GKTL++ LP + + + + +RG P
Sbjct: 89 EDRGITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAP 148
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQP 598
G++ +G A+TGSGKT A+ LP + + + P
Sbjct: 44 GRDCIGCAKTGSGKTAAFALPILQKLCDDP 73
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 33.1 bits (72), Expect = 0.21
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Frame = +3
Query: 354 KHEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*L 524
KHEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ +++
Sbjct: 85 KHEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADP--- 141
Query: 525 A*PKRVPAKRWPTSCQQLCT*IT--NRLFGEVMVPIALVLAPTRELAQQ 665
P + A+ + + +T +R+ P + L+PT ELA+Q
Sbjct: 142 --PVNMIAQSQSGTGKTAAFVLTMLSRVDATKPYPQVICLSPTYELARQ 188
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVH 583
G+++ GVA GSGK LAY+LP I+H
Sbjct: 224 GRDVAGVAIEGSGKRLAYLLP-IIH 247
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHINNQP 598
K+++G+A+TGSGKT A+ LP + + + P
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNP 30
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 32.7 bits (71), Expect = 0.28
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILP 571
GK++V +A+TGSGKT A+++P
Sbjct: 318 GKDVVAMARTGSGKTAAFLIP 338
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 515 NLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG 613
+++ AQTGSGKTLAY+ P +VH + R G
Sbjct: 417 HVICAAQTGSGKTLAYLAP-LVHRLREDEERHG 448
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 396 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
I FE+ + + + V GYK+PTP+Q PI +R
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKR 913
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHINNQPP 601
++L+ AQTGSGKT A+++P + I + P
Sbjct: 913 RDLMACAQTGSGKTAAFLIPILSRIYMEGP 942
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 31.9 bits (69), Expect = 0.48
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 627 ALVLAPTRELAQQIQ 671
ALVLAPTRELAQQIQ
Sbjct: 162 ALVLAPTRELAQQIQ 176
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 31.9 bits (69), Expect = 0.48
Identities = 27/87 (31%), Positives = 38/87 (43%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT 584
FE+ + G+ G+ +P+PIQ + P+A++ R LA AK
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILA-----RAKNGTGKTAAYLV 103
Query: 585 *ITNRLFGEVMVPIALVLAPTRELAQQ 665
+ R ALVL PTRELA Q
Sbjct: 104 PLLERTDTTKNCIQALVLVPTRELALQ 130
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = +2
Query: 449 DNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAI 577
+ G + + + G++++ A+ G+GKT AY++P +
Sbjct: 64 EKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLL 106
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 31.9 bits (69), Expect = 0.48
Identities = 27/87 (31%), Positives = 38/87 (43%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT 584
FE+ + G+ G+ +P+PIQ + P+A++ R LA AK
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILA-----RAKNGTGKTAAYLV 103
Query: 585 *ITNRLFGEVMVPIALVLAPTRELAQQ 665
+ R ALVL PTRELA Q
Sbjct: 104 PLLERTDTTKNCIQALVLVPTRELALQ 130
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = +2
Query: 449 DNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAI 577
+ G + + + G++++ A+ G+GKT AY++P +
Sbjct: 64 EKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLL 106
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2
Query: 482 SSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQP 598
+S + + +GK++ A TG+GKT A++LP + + +P
Sbjct: 38 ASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRP 76
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 381 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 494
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 621 PIALVLAPTRELAQQIQ 671
P ALVL+PTRELA QIQ
Sbjct: 4 PQALVLSPTRELANQIQ 20
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 327 PYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 458
P+E + + KH++ V+ VE + +Q +E F + ++Q VK G
Sbjct: 252 PFEPPKPKTKHKLDVATVEDYKKLQEYEREKFTEMIKQ-VKDTG 294
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 621 PIALVLAPTRELAQQIQ 671
P ALVL+PTRELA QIQ
Sbjct: 66 PQALVLSPTRELANQIQ 82
>SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07)
Length = 401
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = -2
Query: 277 GWSETESHLGVACS--ALQRILFSHQSLQILQIYCHRCQTETNYRRICCLLQIWN-HRFH 107
GW T + S AL+RI + ++ C +YRR CC L +W H +
Sbjct: 181 GWRVTLRVIAATTSQQALERIATPVTTSKLRCSTTQECCVRVDYRRKCC-LHVWRVHTTN 239
Query: 106 GYYSS 92
Y+SS
Sbjct: 240 TYWSS 244
>SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 211 HQSLQILQIYCHRCQTETNYRRICCLLQIWNHRFHGY 101
H L YC RC T CCLLQ++++ ++G+
Sbjct: 484 HLQQPSLAAYC-RCITILTTAIACCLLQVYHNTYNGH 519
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 339 EEYRNK-HEVTVSGVEVHNPIQYFEEANFPDY 431
EE NK H++ + + +HNP YFE+ + DY
Sbjct: 234 EEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_22560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +2
Query: 500 SYVGKNLVGVAQTGSGKTLAY-ILPAI 577
SY G++ +GV TG GK++ + ILPA+
Sbjct: 192 SYTGRDGIGVLPTGYGKSVIFHILPAM 218
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +2
Query: 440 RCKDNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAI 577
+ K G+ + L + K+L+ ++TG+GK+L ++LP++
Sbjct: 174 KLKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSV 219
>SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08)
Length = 816
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +3
Query: 300 PHPTVLKRSPYEVEEYRNK-HEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTP 476
P P V + S Y +Y H S ++ + ++ P Y+QQ ++ +G
Sbjct: 341 PPPLVNQISQYNGSQYNQSLHYSLPSTFQISPVTPSLQPSSVPFYLQQDLEALGRISQPR 400
Query: 477 IQAQGWPIAMSERI 518
+ Q P+A +++
Sbjct: 401 VSPQSRPLASGQQV 414
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,981,698
Number of Sequences: 59808
Number of extensions: 428327
Number of successful extensions: 1233
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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