Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060240.seq
(671 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 78 5e-15
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 66 3e-11
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 58 4e-09
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 47 1e-05
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 43 2e-04
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 43 2e-04
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 43 2e-04
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 43 2e-04
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 41 7e-04
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 40 0.002
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 38 0.009
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 36 0.020
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 36 0.020
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 36 0.035
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 36 0.035
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 35 0.046
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 35 0.046
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 35 0.046
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 35 0.061
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 33 0.14
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 33 0.14
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 33 0.14
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 33 0.14
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 33 0.14
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 33 0.18
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 33 0.18
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 33 0.18
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 33 0.24
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 33 0.24
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 32 0.32
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 32 0.32
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 32 0.43
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 31 0.56
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 31 0.75
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 31 0.75
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 31 0.75
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 31 0.99
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 30 1.7
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 30 1.7
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 30 1.7
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 30 1.7
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 30 1.7
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 30 1.7
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 1.7
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 30 1.7
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 30 1.7
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 30 1.7
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 2.3
U21317-6|AAA62527.1| 313|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 29 3.0
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 29 3.0
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 6.9
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 78.2 bits (184), Expect = 5e-15
Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Frame = +3
Query: 255 WDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYV 434
W + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P +
Sbjct: 82 WSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQI 141
Query: 435 QQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQL--CT*ITNRLFG 608
+ + +++PT IQ+ WPIAMS R ++ K K L T +R G
Sbjct: 142 HE-LLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRG 200
Query: 609 EVMVPIALVLAPTRELAQQIQ 671
E P LVL PTRELAQQ+Q
Sbjct: 201 E--GPAVLVLLPTRELAQQVQ 219
Score = 54.0 bits (124), Expect = 9e-08
Identities = 21/38 (55%), Positives = 32/38 (84%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 622
G++++ +A+TGSGKTLA++LPA+VHI Q +RG+GP
Sbjct: 166 GRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGP 203
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 69.7 bits (163), Expect = 2e-12
Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 9/118 (7%)
Frame = +3
Query: 345 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*L 524
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + R +
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 525 A*PKR---------VPAKRWPTSCQQLCT*ITNRLFGEVMVPIALVLAPTRELAQQIQ 671
+ +P W TS ++ R + P A+++APTRELAQQI+
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKM-----ERQEHRDLGPYAIIMAPTRELAQQIE 395
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCFGLGAY 646
++++GVA+TGSGKT A++LP +V I + P + R + D LG Y
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRD---LGPY 380
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 65.7 bits (153), Expect = 3e-11
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Frame = +3
Query: 264 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQG 443
+ Q FNKNFY+ H + + +V +N + V G++ P+ F +F + +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 444 VKTMGYKEPTPIQAQGWPIAMSERI*LA*PK----RVPAKRWPTSCQQLCT*ITNRLFGE 611
++ Y++PTPIQA P A+S R L K + A WP + + GE
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQ--PDLKAGE 337
Query: 612 VMVPIALVLAPTRELAQQI 668
P+A+++ PTRELA Q+
Sbjct: 338 --GPVAVIVVPTRELAIQV 354
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 58.4 bits (135), Expect = 4e-09
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Frame = +3
Query: 264 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 440
V + F KNFY + + + EV+ YR + + +TV G++ PI+ + + +
Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317
Query: 441 GVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT*ITNRLFGEVMV 620
+K Y +PT IQAQ P MS R + K K + E
Sbjct: 318 VLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDG 377
Query: 621 PIALVLAPTRELAQQ 665
PIA++LAPTRELA Q
Sbjct: 378 PIAVILAPTRELAMQ 392
Score = 54.8 bits (126), Expect = 5e-08
Identities = 21/38 (55%), Positives = 31/38 (81%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 622
G++++G+A+TGSGKTLA++LP HI +QP + GDGP
Sbjct: 341 GRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGP 378
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/50 (42%), Positives = 33/50 (66%)
Frame = +2
Query: 446 KDNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQ 595
+ NG ++ S G++ +GV+QTGSGKTLA++LPA++HI+ Q
Sbjct: 100 RKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQ 149
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Frame = +3
Query: 372 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPA 548
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +S + + +
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSG 133
Query: 549 KRWPTSCQQLCT*ITNRLF-------GEVMVPIALVLAPTRELAQQIQ 671
K L I +L + P LVL+PTRELAQQI+
Sbjct: 134 KTLAFLLPALLH-IDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIE 180
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +3
Query: 339 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 177
Score = 35.9 bits (79), Expect = 0.026
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHI 586
++L+ AQTGSGKT A++LP I HI
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHI 201
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +3
Query: 339 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 161
Score = 35.9 bits (79), Expect = 0.026
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHI 586
++L+ AQTGSGKT A++LP I HI
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHI 185
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +3
Query: 339 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 158
Score = 35.9 bits (79), Expect = 0.026
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHI 586
++L+ AQTGSGKT A++LP I HI
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHI 182
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 42.7 bits (96), Expect = 2e-04
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Frame = +3
Query: 300 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 476
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 477 IQAQGWPIAMSER--I*LA*PKRVPAKRWPTSCQQLCT*ITNRL-FGEVMVPIALVLAPT 647
IQ QG P+A+S R I +A + C +L F P L++ P+
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPS 275
Query: 648 RELAQQI 668
RELA+QI
Sbjct: 276 RELARQI 282
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +2
Query: 446 KDNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGD 616
K G+ A + + G++++G+A TGSGKT+ ++LP ++ Q P R +
Sbjct: 206 KQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSE 265
Query: 617 GPDCFGL 637
GP FGL
Sbjct: 266 GP--FGL 270
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 363 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
V +G +V PI F + + +++++ +KT GY PTP+Q P R
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGR 204
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQPP 601
G++L+ AQTGSGKT A+++P + I P
Sbjct: 203 GRDLMSCAQTGSGKTAAFLVPLVNAILQDGP 233
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 446 KDNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAI 577
KDN + +A S G ++VG A+TGSGKTLA ++P +
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVL 135
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +2
Query: 443 CKDNGLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQP 598
C+ G + + L + GK+++G+A+TGSGKT A+ +P + + + P
Sbjct: 59 CQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP 110
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 36.3 bits (80), Expect = 0.020
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAI 577
GK+++ A+TGSGKTLA++LPAI
Sbjct: 105 GKDVLASAKTGSGKTLAFLLPAI 127
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 36.3 bits (80), Expect = 0.020
Identities = 28/94 (29%), Positives = 45/94 (47%)
Frame = +3
Query: 390 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSC 569
N I F++ + + +G+ G+++P+ IQ + P + R +A + K S
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 570 QQLCT*ITNRLFGEVMVPIALVLAPTRELAQQIQ 671
L L +V AL+L+PTRELA QIQ
Sbjct: 83 SVL-----QSLDTQVRETQALILSPTRELAVQIQ 111
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 35.5 bits (78), Expect = 0.035
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCF 631
GK+++ AQTGSGKT A++LP + + + + G C+
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCY 375
Score = 33.9 bits (74), Expect = 0.11
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PK----RVPAKRWP 560
P + F +++ P +++ V+ GY TPIQ P+ + LA + + A P
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 561 TSCQQLCT*ITNRLFGEVMVPIALVLAPTRELAQQI 668
+ + N P ++L PTRELA QI
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 35.5 bits (78), Expect = 0.035
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCF 631
GK+++ AQTGSGKT A++LP + + + + G C+
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCY 375
Score = 33.9 bits (74), Expect = 0.11
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PK----RVPAKRWP 560
P + F +++ P +++ V+ GY TPIQ P+ + LA + + A P
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 561 TSCQQLCT*ITNRLFGEVMVPIALVLAPTRELAQQI 668
+ + N P ++L PTRELA QI
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 35.1 bits (77), Expect = 0.046
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PK----RVPAKRWP 560
P + F EAN + +Q+ V GY + TPIQ P+ +A + + A P
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 561 TSCQQLCT*ITNRLFGEVMVPIALVLAPTRELAQQI 668
+ + N P ++L PTRELA QI
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +2
Query: 455 GLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCF 631
G +T L + G +++ AQTGSGKT A++LP + + + + C+
Sbjct: 360 GYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCY 418
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 35.1 bits (77), Expect = 0.046
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PK----RVPAKRWP 560
P + F EAN + +Q+ V GY + TPIQ P+ +A + + A P
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 561 TSCQQLCT*ITNRLFGEVMVPIALVLAPTRELAQQI 668
+ + N P ++L PTRELA QI
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +2
Query: 455 GLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCF 631
G +T L + G +++ AQTGSGKT A++LP + + + + C+
Sbjct: 360 GYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCY 418
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 35.1 bits (77), Expect = 0.046
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PK----RVPAKRWP 560
P + F EAN + +Q+ V GY + TPIQ P+ +A + + A P
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 561 TSCQQLCT*ITNRLFGEVMVPIALVLAPTRELAQQI 668
+ + N P ++L PTRELA QI
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +2
Query: 455 GLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCF 631
G +T L + G +++ AQTGSGKT A++LP + + + + C+
Sbjct: 360 GYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCY 418
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 34.7 bits (76), Expect = 0.061
Identities = 27/92 (29%), Positives = 44/92 (47%)
Frame = +3
Query: 396 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQ 575
I F++ + + +G+ G+++P+ IQ + P + R +A + K S
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 576 LCT*ITNRLFGEVMVPIALVLAPTRELAQQIQ 671
L L +V AL+L+PTRELA QIQ
Sbjct: 85 L-----QSLDTQVRETQALILSPTRELAVQIQ 111
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCF 631
G +++ AQTGSGKT A++LP + + ++ + C+
Sbjct: 589 GHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCY 629
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PK----RVPAKRWPTSCQ 572
F EAN + +++ V GY + TPIQ P+ +A + + A P +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 573 QLCT*ITNRLFGEVMVPIALVLAPTRELAQQI 668
+ N P ++L PTREL QI
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCF 631
G +++ AQTGSGKT A++LP + + ++ + C+
Sbjct: 589 GHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCY 629
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PK----RVPAKRWPTSCQ 572
F EAN + +++ V GY + TPIQ P+ +A + + A P +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 573 QLCT*ITNRLFGEVMVPIALVLAPTRELAQQI 668
+ N P ++L PTREL QI
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHI 586
G ++V A TGSGKTLA+++P ++ +
Sbjct: 773 GNDVVACAHTGSGKTLAFLIPFVIKL 798
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHI 586
G ++V A TGSGKTLA+++P ++ +
Sbjct: 773 GNDVVACAHTGSGKTLAFLIPFVIKL 798
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCF 631
G +++ AQTGSGKT A++LP + + ++ + C+
Sbjct: 589 GHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCY 629
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PK----RVPAKRWPTSCQ 572
F EAN + +++ V GY + TPIQ P+ +A + + A P +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 573 QLCT*ITNRLFGEVMVPIALVLAPTRELAQQI 668
+ N P ++L PTREL QI
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = +2
Query: 455 GLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAI 577
G ++ + S ++ + KN++G A+TGSGKT A+++P +
Sbjct: 108 GWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLV 148
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 33.1 bits (72), Expect = 0.18
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQP 598
G +++G A+TG+GKTLA+ +P + ++ P
Sbjct: 126 GSDILGCARTGTGKTLAFAIPILQKLSVDP 155
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 33.1 bits (72), Expect = 0.18
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQP 598
G +++G A+TG+GKTLA+ +P + ++ P
Sbjct: 126 GSDILGCARTGTGKTLAFAIPILQKLSVDP 155
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 32.7 bits (71), Expect = 0.24
Identities = 26/92 (28%), Positives = 45/92 (48%)
Frame = +3
Query: 396 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQ 575
++ F++ + + +G+ G+++P+ IQ + + + +A + K S
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVS- 86
Query: 576 LCT*ITNRLFGEVMVPIALVLAPTRELAQQIQ 671
I R+ E ALV+APTRELAQQIQ
Sbjct: 87 ----ILQRIDHEDPHVQALVMAPTRELAQQIQ 114
Score = 30.7 bits (66), Expect = 0.99
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +2
Query: 455 GLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQPP 601
G ++ A + GK+++ AQ+G+GKT + + + I+++ P
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDP 96
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 32.7 bits (71), Expect = 0.24
Identities = 26/92 (28%), Positives = 45/92 (48%)
Frame = +3
Query: 396 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQ 575
++ F++ + + +G+ G+++P+ IQ + + + +A + K S
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVS- 86
Query: 576 LCT*ITNRLFGEVMVPIALVLAPTRELAQQIQ 671
I R+ E ALV+APTRELAQQIQ
Sbjct: 87 ----ILQRIDHEDPHVQALVMAPTRELAQQIQ 114
Score = 30.7 bits (66), Expect = 0.99
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +2
Query: 455 GLQRTDAHSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQPP 601
G ++ A + GK+++ AQ+G+GKT + + + I+++ P
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDP 96
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 32.3 bits (70), Expect = 0.32
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAI 577
GK++V +++TGSGKT A+++P +
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPML 83
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 32.3 bits (70), Expect = 0.32
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAI 577
GK++V +++TGSGKT A+++P +
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPML 83
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 31.9 bits (69), Expect = 0.43
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +3
Query: 396 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQ 575
I F E V + + TM ++ PT IQ P+ + E P + A+ + +
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEP-----PSNLIAQAQSGTGKT 262
Query: 576 LCT*ITN--RLFGEVMVPIALVLAPTRELAQQI 668
+T R+ +M P + LAPT ELA+QI
Sbjct: 263 AAFVLTMLCRIDVNLMCPQCICLAPTLELAKQI 295
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 515 NLVGVAQTGSGKTLAYILPAIVHIN 589
NL+ AQ+G+GKT A++L + I+
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRID 274
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 31.9 bits (69), Expect = 0.43
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +3
Query: 396 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQ 575
I F E V + + TM ++ PT IQ P+ + E P + A+ + +
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEP-----PSNLIAQAQSGTGKT 287
Query: 576 LCT*ITN--RLFGEVMVPIALVLAPTRELAQQI 668
+T R+ +M P + LAPT ELA+QI
Sbjct: 288 AAFVLTMLCRIDVNLMCPQCICLAPTLELAKQI 320
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 515 NLVGVAQTGSGKTLAYILPAIVHIN 589
NL+ AQ+G+GKT A++L + I+
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRID 299
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 31.9 bits (69), Expect = 0.43
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +3
Query: 396 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQ 575
I F E V + + TM ++ PT IQ P+ + E P + A+ + +
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEP-----PSNLIAQAQSGTGKT 671
Query: 576 LCT*ITN--RLFGEVMVPIALVLAPTRELAQQI 668
+T R+ +M P + LAPT ELA+QI
Sbjct: 672 AAFVLTMLCRIDVNLMCPQCICLAPTLELAKQI 704
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 515 NLVGVAQTGSGKTLAYILPAIVHIN 589
NL+ AQ+G+GKT A++L + I+
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRID 683
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 31.9 bits (69), Expect = 0.43
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 530 AQTGSGKTLAYILPAIVHINNQP 598
A TGSGKT+ Y+LP + + ++P
Sbjct: 163 APTGSGKTICYVLPVLAAVGSKP 185
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 31.5 bits (68), Expect = 0.56
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQ 595
GKN V VA TGSGKT I A+ HI +
Sbjct: 385 GKNCVIVAPTGSGKTEVAIYAALKHIEER 413
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 31.5 bits (68), Expect = 0.56
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHI 586
+N++ A TGSGKTLA+ LP I I
Sbjct: 164 RNVLASAPTGSGKTLAFALPVIDEI 188
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 31.1 bits (67), Expect = 0.75
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHI 586
++++G A+TGSGKTLA+ +P + +
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARL 51
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 31.1 bits (67), Expect = 0.75
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHI 586
++++G A+TGSGKTLA+ +P + +
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARL 218
Score = 29.9 bits (64), Expect = 1.7
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Frame = +3
Query: 423 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRW-----PTSCQQLCT* 587
P+ V + ++ MG+ EPT IQ+ P A+ +R + + + P + L +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 588 ITNRLFG--EVMVPIALVLAPTRELAQQI 668
++ EV P AL++APTREL QI
Sbjct: 223 DDSQETESTEVRGPRALIVAPTRELVIQI 251
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 31.1 bits (67), Expect = 0.75
Identities = 26/88 (29%), Positives = 38/88 (43%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT 584
FE+ N + + GY +PTPIQ P+A++ + A K +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKT-AAFVLPILE 208
Query: 585 *ITNRLFGEVMVPIALVLAPTRELAQQI 668
+ R G + LVL PTRELA Q+
Sbjct: 209 RMIYRPKGASCTRV-LVLVPTRELAIQV 235
Score = 30.7 bits (66), Expect = 0.99
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQP 598
GK++ A TG+GKT A++LP + + +P
Sbjct: 185 GKDICACAATGTGKTAAFVLPILERMIYRP 214
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 30.7 bits (66), Expect = 0.99
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 621 PIALVLAPTRELAQQI 668
P+AL+LAPTRELA QI
Sbjct: 460 PLALILAPTRELAAQI 475
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -3
Query: 279 KVGVKQNPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 100
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 99 IPVTRHDYFSDLVEDVYLNYGFFLTQ 22
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -3
Query: 279 KVGVKQNPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 100
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 99 IPVTRHDYFSDLVEDVYLNYGFFLTQ 22
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAI 577
G+ LV A TG GKT A+++PAI
Sbjct: 30 GRGLVVEAPTGIGKTYAFLIPAI 52
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAI 577
G+ LV A TG GKT A+++PAI
Sbjct: 130 GRGLVVEAPTGIGKTYAFLIPAI 152
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -3
Query: 279 KVGVKQNPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 100
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 99 IPVTRHDYFSDLVEDVYLNYGFFLTQ 22
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -3
Query: 279 KVGVKQNPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 100
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 99 IPVTRHDYFSDLVEDVYLNYGFFLTQ 22
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 21 PASERIHSLNKHLQLNPKNNHVW 89
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/123 (22%), Positives = 58/123 (47%)
Frame = -1
Query: 653 LSGRRQDQSNRDHHLSE*AVGYLCAQLLARCRPTFCRNPFGLRQLNSFRHSYRPALSLNG 474
+ G Q+ +N H ++ ++ +L + L FC F +R+ FR S+RP +
Sbjct: 185 MKGHYQEYTNIPHTINNFSLVFLTSFLYM----FFC---FKVRR--QFRKSFRPKRTARQ 235
Query: 473 RRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILFDFIW*SFENCRMWII 294
R+ F+ L L+H+ I + V+ + + + F++I+ ++W + C + I
Sbjct: 236 RQIFLQAFLLCLIHLSASILY--VVMQFIEVPK------FLTIISQYLWQLAQGCPVIIY 287
Query: 293 KVF 285
+F
Sbjct: 288 LIF 290
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = -1
Query: 512 FRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILFD 336
+R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F+
Sbjct: 28 YRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = -1
Query: 512 FRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILFD 336
+R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F+
Sbjct: 28 YRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 107 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 223
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>U21317-6|AAA62527.1| 313|Caenorhabditis elegans Hypothetical
protein B0495.8a protein.
Length = 313
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 443 CKDNGLQRTDAHSSSRLADSYVGKNLVGVAQT 538
C+D G Q SR+AD Y GK +G+ +T
Sbjct: 191 CEDCGAQLNITDHESRIADHYNGKMHIGMVET 222
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 536 TGSGKTLAYILPAIVH 583
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 515 NLVGVAQTGSGKTLAYILPAIVHINN 592
++V + TGSGKTLA++LP + I N
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQN 73
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +3
Query: 441 GVKTMGYKEPTPIQAQGWPIAMSERI*LA*PKRVPAKRWPTSCQQLCT*ITNRLFGEVMV 620
G+ G+++P+PIQ +A++ + LA AK C + ++ +
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILA-----RAKNGTGKTGAYCIPVIEKIQPALKA 111
Query: 621 PIALVLAPTRELAQQ 665
A+V+ PTRELA Q
Sbjct: 112 IQAMVIVPTRELALQ 126
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 162 RRIIAEFVASSKFGTTVSTAIIPV 91
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 162 RRIIAEFVASSKFGTTVSTAIIPV 91
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 300 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 458
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 300 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 458
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,844,924
Number of Sequences: 27780
Number of extensions: 324564
Number of successful extensions: 1105
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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