Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060239.seq
(656 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41432 Cluster: Uncharacterized 20.4 kDa protein in IAP... 149 4e-35
UniRef50_A1YR81 Cluster: Late expression factor-6; n=1; Maruca v... 91 2e-17
UniRef50_O10295 Cluster: Uncharacterized 16.5 kDa protein; n=4; ... 64 4e-09
UniRef50_Q91GL8 Cluster: LEF-6; n=1; Epiphyas postvittana NPV|Re... 63 5e-09
UniRef50_Q9J813 Cluster: ORF127 lef6; n=4; Nucleopolyhedrovirus|... 57 3e-07
UniRef50_Q2NP41 Cluster: LEF6; n=1; Hyphantria cunea nucleopolyh... 56 6e-07
UniRef50_Q8V5W4 Cluster: ORF23; n=3; Nucleopolyhedrovirus|Rep: O... 56 7e-07
UniRef50_Q80LR7 Cluster: Late expression factor 6; n=1; Adoxophy... 54 3e-06
UniRef50_Q287D2 Cluster: LEF-6; n=1; Agrotis segetum nucleopolyh... 54 4e-06
UniRef50_Q1HGY6 Cluster: Lef-6; n=1; Antheraea pernyi nucleopoly... 53 7e-06
UniRef50_Q9YMT6 Cluster: Late expression factor 6; n=1; Lymantri... 51 3e-05
UniRef50_Q462E5 Cluster: Late expression factor 6; n=3; Nucleopo... 51 3e-05
UniRef50_Q0N481 Cluster: LEF-6; n=1; Clanis bilineata nucleopoly... 44 0.002
UniRef50_A0EYR9 Cluster: Late expression factor 6; n=1; Ecotropi... 39 0.12
UniRef50_Q8JRY7 Cluster: Late expression factor 6; n=1; Phthorim... 37 0.37
UniRef50_Q1DP85 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_A6W0H7 Cluster: Methyl-accepting chemotaxis sensory tra... 33 8.0
>UniRef50_P41432 Cluster: Uncharacterized 20.4 kDa protein in
IAP1-SOD intergenic region; n=4;
Nucleopolyhedrovirus|Rep: Uncharacterized 20.4 kDa
protein in IAP1-SOD intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 173
Score = 149 bits (362), Expect = 4e-35
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +2
Query: 44 MVFDVYYNGYYVEKKFSKEFLIHIAPDLKNSVDWNGSTRKLLRVLNKRAYRQVLQCNGRY 223
MVF+VYYNGYYVEKKFSKEFLIHIAPDLKNSVDWNGSTRK LRVL+KRAYRQVL CNGRY
Sbjct: 1 MVFNVYYNGYYVEKKFSKEFLIHIAPDLKNSVDWNGSTRKQLRVLDKRAYRQVLHCNGRY 60
Query: 224 YWPDGTKFVS 253
YWPDGTKFVS
Sbjct: 61 YWPDGTKFVS 70
Score = 139 bits (337), Expect = 5e-32
Identities = 63/67 (94%), Positives = 65/67 (97%)
Frame = +1
Query: 259 YNRSIRTHSTTVKRTDSSHRLKSQVVDKRPRRSLDSPRLDGYVLASSPIPHTDWNEELKL 438
YN+SIRTHS TVKRTDSSHRLKS VVDKRPRRSLDSPRLDGYVLASSPIPH+DWNEELKL
Sbjct: 73 YNKSIRTHSATVKRTDSSHRLKSHVVDKRPRRSLDSPRLDGYVLASSPIPHSDWNEELKL 132
Query: 439 YAQSHGY 459
YAQSHGY
Sbjct: 133 YAQSHGY 139
Score = 36.7 bits (81), Expect = 0.49
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 510 LKSLNNHLNDLNVLEKQ 560
LKSLNNHL+DLNVLEKQ
Sbjct: 157 LKSLNNHLDDLNVLEKQ 173
>UniRef50_A1YR81 Cluster: Late expression factor-6; n=1; Maruca
vitrata MNPV|Rep: Late expression factor-6 - Maruca
vitrata MNPV
Length = 172
Score = 91.1 bits (216), Expect = 2e-17
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 13/82 (15%)
Frame = +2
Query: 44 MVFDVYYNGYYVEKKFSKEFLIHI-------------APDLKNSVDWNGSTRKLLRVLNK 184
MV+ V+YNG+ VEKKFSKE+L HI PDLKN+VDW S+RK L VLN+
Sbjct: 1 MVYLVFYNGFNVEKKFSKEYLNHIYYDQIAHSIQRKIIPDLKNNVDWERSSRKQLHVLNR 60
Query: 185 RAYRQVLQCNGRYYWPDGTKFV 250
Y+++L+C+GRYYWP+G +F+
Sbjct: 61 DVYKRLLKCDGRYYWPNGYRFL 82
>UniRef50_O10295 Cluster: Uncharacterized 16.5 kDa protein; n=4;
Nucleopolyhedrovirus|Rep: Uncharacterized 16.5 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 138
Score = 63.7 bits (148), Expect = 4e-09
Identities = 24/67 (35%), Positives = 43/67 (64%)
Frame = +2
Query: 47 VFDVYYNGYYVEKKFSKEFLIHIAPDLKNSVDWNGSTRKLLRVLNKRAYRQVLQCNGRYY 226
+ ++ YNG K+FS+E + + + +DW S+R+ LRV + R + ++ +C+ RY+
Sbjct: 1 MMELQYNGQGYSKRFSRELVALMCAGAVSGIDWRRSSRRRLRVRDARVFSRLQRCSERYF 60
Query: 227 WPDGTKF 247
WPDGT+F
Sbjct: 61 WPDGTRF 67
>UniRef50_Q91GL8 Cluster: LEF-6; n=1; Epiphyas postvittana NPV|Rep:
LEF-6 - Epiphyas postvittana nucleopolyhedrovirus
(EppoMNPV)
Length = 134
Score = 63.3 bits (147), Expect = 5e-09
Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Frame = +2
Query: 53 DVYYNGYYVEKKFSKEFLIHIAPDL------KNSVDWNGSTRKLLRVLNKRAYRQVLQCN 214
D+YYNG+ K++++ F+ + D+ +DW S+R+ LRV ++R Y ++L C+
Sbjct: 2 DLYYNGHTYNKRYTRHFVALMCADVFPHCDTVMGIDWRRSSRRRLRVHSRRVYDRLLHCS 61
Query: 215 GRYYWPDGTKFV 250
RY+WP+G +FV
Sbjct: 62 DRYFWPNGERFV 73
>UniRef50_Q9J813 Cluster: ORF127 lef6; n=4;
Nucleopolyhedrovirus|Rep: ORF127 lef6 - Spodoptera
exigua MNPV
Length = 163
Score = 57.2 bits (132), Expect = 3e-07
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +2
Query: 59 YYNGYYVEKKFSKEFLIHIAPD-LKNSVDWNGSTRKLLRVLNKRAYRQVLQCNGRYYWPD 235
Y NG +VEK+F +EF+ I +K+ ++ TRK + V + A +++L NGR +WPD
Sbjct: 5 YINGSHVEKRFGREFINFICGGKIKHDIEPEQCTRKRVVVKSSYAAKKLLAANGRAFWPD 64
Query: 236 GTKF 247
GTKF
Sbjct: 65 GTKF 68
>UniRef50_Q2NP41 Cluster: LEF6; n=1; Hyphantria cunea
nucleopolyhedrovirus|Rep: LEF6 - Hyphantria cunea
nuclear polyhedrosis virus (HcNPV)
Length = 134
Score = 56.4 bits (130), Expect = 6e-07
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Frame = +2
Query: 47 VFDVYYNGYYVEKKFSKEFLIHIAPDLKN------SVDWNGSTRKLLRVLNKRAYRQVLQ 208
+ ++ YNG +K+F +EF+ + + K ++W S+R LRV N R + ++
Sbjct: 1 MMELQYNGQAYKKRFVREFIALMCANAKTPCCAAAGINWRRSSRTCLRVHNARVFERLRH 60
Query: 209 CNGRYYWPDGTKF 247
C+ RY+WPDG +F
Sbjct: 61 CSERYFWPDGNRF 73
>UniRef50_Q8V5W4 Cluster: ORF23; n=3; Nucleopolyhedrovirus|Rep:
ORF23 - Helicoverpa zea SNPV
Length = 187
Score = 56.0 bits (129), Expect = 7e-07
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +2
Query: 44 MVFDVYYNGYYVEKKFSKEFLIHIA-PDLKNSVDWNGSTRKLLRVLNKRAYRQVLQCNGR 220
M + VY NG +EK+FS+EF++ + P +++ V W+ +RK L V ++ A + + N R
Sbjct: 1 MSYVVYINGAQIEKRFSREFILFVCGPAIRDCVIWSECSRKRLVVTSRWAADRFAELNQR 60
Query: 221 YYWPDGTKF 247
+WP G +F
Sbjct: 61 VFWPSGERF 69
>UniRef50_Q80LR7 Cluster: Late expression factor 6; n=1; Adoxophyes
honmai NPV|Rep: Late expression factor 6 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 152
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/83 (31%), Positives = 43/83 (51%)
Frame = +2
Query: 62 YNGYYVEKKFSKEFLIHIAPDLKNSVDWNGSTRKLLRVLNKRAYRQVLQCNGRYYWPDGT 241
YNG KKF++EFL H+ + +DW+ TRK L + + ++L N R YWP+G
Sbjct: 9 YNGVNFAKKFTREFLNHVCGGHVD-IDWDKCTRKRLVINSANTAHRLLNINQRVYWPNGE 67
Query: 242 KFVSLCTTDLFARTAQQSNGPTA 310
+F+ + + + + TA
Sbjct: 68 RFICYPISTPYVKKYNKKKSRTA 90
>UniRef50_Q287D2 Cluster: LEF-6; n=1; Agrotis segetum
nucleopolyhedrovirus|Rep: LEF-6 - Agrotis segetum
nuclear polyhedrosis virus (AsNPV)
Length = 168
Score = 53.6 bits (123), Expect = 4e-06
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 59 YYNGYYVEKKFSKEFLIHIAPD-LKNSVDWNGSTRKLLRVLNKRAYRQVLQCNGRYYWPD 235
Y NG VEK+F +EF+ ++ +K + + TRK + V ++ A +++L+ N R YWPD
Sbjct: 5 YINGGRVEKRFGREFVNYVCGGKIKQDIKADECTRKRVVVRSRYAAKKLLEANNRVYWPD 64
Query: 236 GTKF 247
GT F
Sbjct: 65 GTLF 68
>UniRef50_Q1HGY6 Cluster: Lef-6; n=1; Antheraea pernyi
nucleopolyhedrovirus|Rep: Lef-6 - Antheraea pernyi
nuclear polyhedrosis virus (ApNPV)
Length = 106
Score = 52.8 bits (121), Expect = 7e-06
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = +2
Query: 116 APDLKNSVDWNGSTRKLLRVLNKRAYRQVLQCNGRYYWPDGTKF 247
+P +VDW S+R+ LRV ++ A R + +C+GRY+WPDG +F
Sbjct: 6 SPPCNAAVDWRRSSRRRLRVRDRCAARHLQRCSGRYFWPDGARF 49
>UniRef50_Q9YMT6 Cluster: Late expression factor 6; n=1; Lymantria
dispar MNPV|Rep: Late expression factor 6 - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 159
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 56 VYYNGYYVEKKFSKEFLIHIAPD-LKNSVDWNGSTRKLLRVLNKRAYRQVLQCNGRYYWP 232
V NG EK+F+KEFL + + V W+ TRKLL V A ++L+ + R +WP
Sbjct: 6 VRINGGRYEKRFTKEFLTFVCGKRIDGQVRWDRCTRKLLSVATDGAVERLLRLDRRAFWP 65
Query: 233 DGTKF 247
DG F
Sbjct: 66 DGAAF 70
>UniRef50_Q462E5 Cluster: Late expression factor 6; n=3;
Nucleopolyhedrovirus|Rep: Late expression factor 6 -
Trichoplusia ni SNPV
Length = 161
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +2
Query: 26 YLWCNKMVFDVYYNGYYVEKKFSKEFLIHIAPD-LKNSVDWNGSTRKLLRVLNKRAYRQV 202
Y + ++ F Y NG V+KKF K+F+ H+ ++ + + TRK + + ++ A ++
Sbjct: 3 YDYTDRDCFVFYVNGENVDKKFIKDFINHVCGGRIRTDIRHDKCTRKRIVLTSRYAANKL 62
Query: 203 LQCNGRYYWPDGTKF 247
+ N R YWPDG+ F
Sbjct: 63 MAVNRRVYWPDGSLF 77
>UniRef50_Q0N481 Cluster: LEF-6; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: LEF-6 - Clanis bilineata
nucleopolyhedrosis virus
Length = 193
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +2
Query: 65 NGYYVEKKFSKEFLIHIAPD-LKNSVDWNGSTRKLLRVLNKRAYRQVLQCNGRYYWPDGT 241
NG V+K+F+ +F+ +I + +K+ + + TRK + V K A Q+++ N Y+WP+G
Sbjct: 7 NGGDVQKRFAHKFIDYICKNTIKDYIISDQCTRKQIVVSTKYAASQLMRANKNYFWPNGR 66
Query: 242 KF 247
+F
Sbjct: 67 RF 68
>UniRef50_A0EYR9 Cluster: Late expression factor 6; n=1; Ecotropis
obliqua NPV|Rep: Late expression factor 6 - Ecotropis
obliqua NPV
Length = 241
Score = 38.7 bits (86), Expect = 0.12
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 44 MVFDVYYNGYYVEKKFSKEFLIHIAP--DLKNSVDWNGSTRKLLRVLNKRAYRQVLQCNG 217
M + Y NG K F F+ + ++ + WN TRKLL V K ++L N
Sbjct: 1 MTYYFYINGEDYPKSFIFSFVYTVCGGGNINRFIQWNRCTRKLLVVNAKHVADKLLSVNK 60
Query: 218 RYYWPDGTKF 247
+ YW +G F
Sbjct: 61 KVYWYNGELF 70
>UniRef50_Q8JRY7 Cluster: Late expression factor 6; n=1; Phthorimaea
operculella granulovirus|Rep: Late expression factor 6 -
Phthorimaea operculella granulovirus
Length = 94
Score = 37.1 bits (82), Expect = 0.37
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 119 PDLKNSVDWNGSTRKLLRVLNKRAYRQVLQCNGRYYWPDGTKF 247
P+L +VDWN ST L + K A ++ N +Y+PDGT F
Sbjct: 29 PELVKNVDWNRSTHIKLYIKRKSALNKIR--NMSFYYPDGTVF 69
>UniRef50_Q1DP85 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 755
Score = 34.3 bits (75), Expect = 2.6
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 286 TTVKRTDSSHRLKSQVVDKRPRRSLDSPRLDGYVLASSPIPHTDWNEELKLYAQSH 453
TT+ +D+ R V RP ++ + + D Y+ ASSP P WN+E + SH
Sbjct: 439 TTLAVSDNGRRPPYPVFLSRPAQAHITSKDDSYLSASSPRPFKSWNQE-SITGDSH 493
>UniRef50_A6W0H7 Cluster: Methyl-accepting chemotaxis sensory
transducer; n=1; Marinomonas sp. MWYL1|Rep:
Methyl-accepting chemotaxis sensory transducer -
Marinomonas sp. MWYL1
Length = 626
Score = 32.7 bits (71), Expect = 8.0
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 207 SATADTIGPMAQSLFLCVQQIYSHAQHNSQTDRQLASIKKPGSRQTAA 350
+A ++++ A L + V Q + H SQ +Q+A +KKP + Q +A
Sbjct: 547 AAASESLLGQADQLTMNVNQFILNDDHQSQNIKQIAHVKKPAASQASA 594
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,132,718
Number of Sequences: 1657284
Number of extensions: 9726019
Number of successful extensions: 28922
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 28040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28902
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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