Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060239.seq
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    24   1.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.7  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   3.9  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   6.7  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   6.7  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   8.9  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/58 (18%), Positives = 24/58 (41%)
 Frame = +1

Query: 169 ARFKQACLQTGVAVQRQILLARWHKVCFSVYNRSIRTHSTTVKRTDSSHRLKSQVVDK 342
           ARF   C++     +  I    +  +CF    +S+R         D  H++  ++ ++
Sbjct: 434 ARFFTDCIKNREGFEMVIAEPEYTNICFWYVPKSLRGRKDEADYKDKLHKVAPRIKER 491


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -3

Query: 423 IPVGVWYGRRCQNISVQTRR 364
           +P+GV Y  +C+ + +Q +R
Sbjct: 55  VPIGVLYCMKCECVPLQKKR 74


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -1

Query: 293 TVVLCVRIDLLYTEKQTLCHRANSICRCTATPVC 192
           T  LC+   LLY E+   C    ++  C   P+C
Sbjct: 124 TEQLCIG-GLLYNERTHSCDWPENVDGCQKHPLC 156


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 41  KMVFDVYYNGYYVEKKFSKEFLIH 112
           K + D YY G   E      +LIH
Sbjct: 349 KKIRDFYYGGPNSENNLDNFYLIH 372


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 41  KMVFDVYYNGYYVEKKFSKEFLIH 112
           K + D YY G   E      +LIH
Sbjct: 351 KKIRDFYYGGPNSENNLDNFYLIH 374


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 521 K*SSKRLECIRKTIKHVLK 577
           K + K  E +RK I+H++K
Sbjct: 73  KCNEKHKEGVRKVIRHLIK 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,233
Number of Sequences: 336
Number of extensions: 2513
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)