Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060239.seq
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   2.1  
Y17703-1|CAA76823.1|  111|Anopheles gambiae D7r1 protein protein.      23   8.5  
AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450 pr...    23   8.5  
AY045760-1|AAK84942.1|  165|Anopheles gambiae D7-related 1 prote...    23   8.5  
AJ133852-1|CAB39727.1|  165|Anopheles gambiae D7-related 1 prote...    23   8.5  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 130 KQRRLERQHAQTAARFKQACLQTGVAVQ 213
           K+ RLE+Q A   A  KQ C +  V  Q
Sbjct: 207 KEARLEKQEADRYASLKQECSEKQVHFQ 234


>Y17703-1|CAA76823.1|  111|Anopheles gambiae D7r1 protein protein.
          Length = 111

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +1

Query: 238 HKVCFSVYNRSIRTHSTTVKRTDSSH--RLKSQVVDKRPRRSLDSPRLDGYV 387
           H V        +   + TVK+ +      LKSQ+ + R  + LD+P +D ++
Sbjct: 6   HLVSLLACGLFVIAQANTVKKCEKKMPASLKSQLCEIRKYKLLDTPDMDKHM 57


>AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450
           protein.
          Length = 276

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +3

Query: 300 DRQLASIKKPGSRQTAAPFFRFSSFGRICFG 392
           DR  AS K  G+ +   PF  F    R C G
Sbjct: 203 DRFAASSKLSGASKNRPPFMPFGLGPRHCIG 233


>AY045760-1|AAK84942.1|  165|Anopheles gambiae D7-related 1 protein
           protein.
          Length = 165

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +1

Query: 238 HKVCFSVYNRSIRTHSTTVKRTDSSH--RLKSQVVDKRPRRSLDSPRLDGYV 387
           H V        +   + TVK+ +      LKSQ+ + R  + LD+P +D ++
Sbjct: 6   HLVSLLACGLFVIAQANTVKKCEKKMPASLKSQLCEIRKYKLLDTPDMDKHM 57


>AJ133852-1|CAB39727.1|  165|Anopheles gambiae D7-related 1 protein
           protein.
          Length = 165

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +1

Query: 238 HKVCFSVYNRSIRTHSTTVKRTDSSH--RLKSQVVDKRPRRSLDSPRLDGYV 387
           H V        +   + TVK+ +      LKSQ+ + R  + LD+P +D ++
Sbjct: 6   HLVSLLACGLFVIAQANTVKKCEKKMPASLKSQLCEIRKYKLLDTPDMDKHM 57


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,404
Number of Sequences: 2352
Number of extensions: 11612
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)