Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060237.seq
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   1.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.3  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   5.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   5.3  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.2  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   9.2  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 207 FQRYQHRIVLILQTNGCRTKFHSFHCILHLM 115
           ++ + HR  L    N C+  ++ FH  L LM
Sbjct: 126 YEDFWHRYTLSFIENYCQFLYNCFHSTLLLM 156


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = -1

Query: 383 DETSNWHWSIMRISVIETLCA 321
           D+ S+++W+++ I+V   +CA
Sbjct: 915 DQWSSFYWNLLPIAVFILVCA 935



 Score = 21.0 bits (42), Expect = 9.2
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 439 WVWACWLL 462
           W+W  WLL
Sbjct: 452 WIWLVWLL 459


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = -1

Query: 383 DETSNWHWSIMRISVIETLCA 321
           D+ S+++W+++ I+V   +CA
Sbjct: 915 DQWSSFYWNLLPIAVFILVCA 935



 Score = 21.0 bits (42), Expect = 9.2
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 439 WVWACWLL 462
           W+W  WLL
Sbjct: 452 WIWLVWLL 459


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 482 SYLPDLSVSNYFDCRAMA 535
           S LP+++ S Y+D RA+A
Sbjct: 210 SVLPNVNSSVYYDPRALA 227


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 479 TSYLPDLSVSNYFDCRAMAIGARSQSARTYL 571
           + +LP  S +N+FD     I +   +A T+L
Sbjct: 314 SQHLPKFSAANFFDIERSTILSVLGTACTFL 344


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 13/42 (30%), Positives = 16/42 (38%)
 Frame = +3

Query: 204 ETRCERIVRISEENYSYDEHIGISISGLTADARMLSRYMRTE 329
           E  CER+   S E Y     I   I G       ++ YM  E
Sbjct: 238 EPLCERLFEASREEYVTRHLIDGRIIGCDQRISFIAGYMTEE 279


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 102 RTPYCDVAIVLVPEHF 55
           R P CD A+ ++P+ F
Sbjct: 159 RAPPCDPAVCVLPDCF 174


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 439 WVWACWLL 462
           W+W  WLL
Sbjct: 219 WIWLVWLL 226


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 439 WVWACWLL 462
           W+W  WLL
Sbjct: 465 WIWLLWLL 472


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 439 WVWACWLL 462
           W+W  WLL
Sbjct: 465 WIWLLWLL 472


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 439 WVWACWLL 462
           W+W  WLL
Sbjct: 465 WIWLLWLL 472


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 439 WVWACWLL 462
           W+W  WLL
Sbjct: 465 WIWLLWLL 472


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 260 TYWNFYIRSYCR 295
           T W  Y+R YC+
Sbjct: 57  TCWIIYVRIYCK 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,008
Number of Sequences: 336
Number of extensions: 3473
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)