Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060237.seq
(671 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g42790.1 68418.m05212 20S proteasome alpha subunit F1 (PAF1) ... 121 4e-28
At1g47250.1 68414.m05231 20S proteasome alpha subunit F2 (PAF2) ... 121 4e-28
At3g14290.1 68416.m01808 20S proteasome alpha subunit E2 (PAE2) ... 74 1e-13
At1g53850.1 68414.m06129 20S proteasome alpha subunit E1 (PAE1) ... 74 1e-13
At1g16470.1 68414.m01970 20S proteasome alpha subunit B (PAB1) (... 70 2e-12
At1g79210.1 68414.m09235 20S proteasome alpha subunit B, putativ... 68 5e-12
At5g66140.1 68418.m08332 20S proteasome alpha subunit D2 (PAD2) ... 65 4e-11
At3g51260.1 68416.m05611 20S proteasome alpha subunit D (PAD1) 64 8e-11
At3g22110.1 68416.m02791 20S proteasome alpha subunit C (PAC1) (... 62 2e-10
At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1) ... 61 6e-10
At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1) (... 61 6e-10
At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2) ... 58 4e-09
At3g09930.1 68416.m01188 GDSL-motif lipase/hydrolase family prot... 33 0.17
At3g26340.1 68416.m03286 20S proteasome beta subunit E, putative... 33 0.23
At1g13060.1 68414.m01514 20S proteasome beta subunit E1 (PBE1) (... 33 0.23
At3g22630.1 68416.m02857 20S proteasome beta subunit D (PBD1) (P... 32 0.40
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 29 2.8
At4g14800.1 68417.m02275 20S proteasome beta subunit D2 (PBD2) (... 29 3.7
At3g07490.1 68416.m00893 calcium-binding protein, putative simil... 28 6.5
At5g03610.1 68418.m00320 GDSL-motif lipase/hydrolase family prot... 27 8.6
At3g60620.1 68416.m06783 phosphatidate cytidylyltransferase fami... 27 8.6
At2g32990.1 68415.m04043 glycosyl hydrolase family 9 protein sim... 27 8.6
>At5g42790.1 68418.m05212 20S proteasome alpha subunit F1 (PAF1)
(gb|AAC32062.1)
Length = 278
Score = 121 bits (292), Expect = 4e-28
Identities = 49/87 (56%), Positives = 69/87 (79%)
Frame = +3
Query: 246 YSYDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRY 425
+ D+HIG++I+GLTAD R+LSRYMR+E +NH +++++P+PVGRL+ + +K Q+CTQR
Sbjct: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRS 123
Query: 426 DKRPLGVGLLVAGYDDQGPHIYQTCPS 506
KRP GVGLLV G D+ G H+Y CPS
Sbjct: 124 WKRPYGVGLLVGGLDESGAHLYYNCPS 150
Score = 92.7 bits (220), Expect = 2e-19
Identities = 42/63 (66%), Positives = 52/63 (82%)
Frame = +1
Query: 58 MFRNQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSELSAYQ 237
MFRNQYD+DVT WSP GRL QVEYAMEAVK GSA IGL+++ + VL + +A SELS++Q
Sbjct: 1 MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60
Query: 238 KKI 246
+KI
Sbjct: 61 RKI 63
Score = 54.0 bits (124), Expect = 9e-08
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = +2
Query: 509 NYFDCRAMAIGARSQSARTYLEKHLNTFMDCDLQELVAHGLRALRDTLPNE 661
NYF+ +A AIG+RSQ+A+TYLE+ +F D ++L+ + A+R+TL E
Sbjct: 152 NYFEYQAFAIGSRSQAAKTYLERRFESFGDSSREDLIKDAILAVRETLQGE 202
>At1g47250.1 68414.m05231 20S proteasome alpha subunit F2 (PAF2)
(PRC2B) (PRS1) identical to GB:AAC32063 from
[Arabidopsis thaliana] (Genetics 149 (2), 677-692
(1998)); identical to cDNA proteasome subunit prc2b
GI:2511585
Length = 277
Score = 121 bits (292), Expect = 4e-28
Identities = 49/87 (56%), Positives = 69/87 (79%)
Frame = +3
Query: 246 YSYDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRY 425
+ D+HIG++I+GLTAD R+LSRYMR+E +NH +++++P+PVGRL+ + +K Q+CTQR
Sbjct: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRS 123
Query: 426 DKRPLGVGLLVAGYDDQGPHIYQTCPS 506
KRP GVGLLV G D+ G H+Y CPS
Sbjct: 124 WKRPYGVGLLVGGLDESGAHLYYNCPS 150
Score = 92.7 bits (220), Expect = 2e-19
Identities = 42/63 (66%), Positives = 52/63 (82%)
Frame = +1
Query: 58 MFRNQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSELSAYQ 237
MFRNQYD+DVT WSP GRL QVEYAMEAVK GSA IGL+++ + VL + +A SELS++Q
Sbjct: 1 MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60
Query: 238 KKI 246
+KI
Sbjct: 61 RKI 63
Score = 54.0 bits (124), Expect = 9e-08
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +2
Query: 509 NYFDCRAMAIGARSQSARTYLEKHLNTFMDCDLQELVAHGLRALRDTLPNE 661
NYF+ +A AIG+RSQ+A+TYLE+ +F + ++L+ + A+R+TL E
Sbjct: 152 NYFEYQAFAIGSRSQAAKTYLERKFESFQESSKEDLIKDAIMAIRETLQGE 202
>At3g14290.1 68416.m01808 20S proteasome alpha subunit E2 (PAE2)
identical to 20S proteasome subunit PAE2 GB:AAC32061
from [Arabidopsis thaliana]
Length = 237
Score = 73.7 bits (173), Expect = 1e-13
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Frame = +3
Query: 237 EENYSYDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPV---GRLISSVGNKMQ 407
E+ D+HIG ++SGL ADAR L + R E NHR+S+ PM V + + + +
Sbjct: 65 EKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFG 124
Query: 408 ICTQRYDKRPLGVGLLVAGYDDQGPHIYQTCPSAT 512
+ RP GV LL+AG+D+ GP +Y T PS T
Sbjct: 125 EGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGT 159
Score = 63.3 bits (147), Expect = 1e-10
Identities = 30/54 (55%), Positives = 37/54 (68%)
Frame = +1
Query: 64 RNQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSEL 225
R +YD V +SP+GRL QVEYA+EA+KLGS IG+K K+ VL KR S L
Sbjct: 5 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPL 58
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +2
Query: 485 YLPDLSVSNYFDCRAMAIGARSQSARTYLEKHLNTFMDCDLQELVAHGLRALRDTL---- 652
Y D S ++ C A AIG+ S+ A + L++ N D LQE + L+ +
Sbjct: 152 YYTDPS-GTFWQCNAKAIGSGSEGADSSLQEQFN--KDITLQEAETIAVSILKQVMEEKV 208
Query: 653 -PNEVDL 670
PN VD+
Sbjct: 209 TPNNVDI 215
>At1g53850.1 68414.m06129 20S proteasome alpha subunit E1 (PAE1)
identical to 20S proteasome subunit PAE1 GI:3421087 from
[Arabidopsis thaliana]
Length = 237
Score = 73.7 bits (173), Expect = 1e-13
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Frame = +3
Query: 237 EENYSYDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPV---GRLISSVGNKMQ 407
E+ D+HIG ++SGL ADAR L + R E NHR+S+ PM V + + + +
Sbjct: 65 EKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFG 124
Query: 408 ICTQRYDKRPLGVGLLVAGYDDQGPHIYQTCPSAT 512
+ RP GV LL+AG+D+ GP +Y T PS T
Sbjct: 125 EGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGT 159
Score = 63.3 bits (147), Expect = 1e-10
Identities = 30/54 (55%), Positives = 37/54 (68%)
Frame = +1
Query: 64 RNQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSEL 225
R +YD V +SP+GRL QVEYA+EA+KLGS IG+K K+ VL KR S L
Sbjct: 5 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPL 58
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +2
Query: 485 YLPDLSVSNYFDCRAMAIGARSQSARTYLEKHLNTFMDCDLQELVAHGLRALRDTL---- 652
Y D S ++ C A AIG+ S+ A + L++ N D LQE + L+ +
Sbjct: 152 YYTDPS-GTFWQCNAKAIGSGSEGADSSLQEQFN--KDLSLQEAETIAVSILKQVMEEKV 208
Query: 653 -PNEVDL 670
PN VD+
Sbjct: 209 TPNNVDI 215
>At1g16470.1 68414.m01970 20S proteasome alpha subunit B (PAB1)
(PRC3) identical to proteasome subunit alpha type 2
SP:O23708, GI:6093778; identical to cDNA proteasome
subunit prc3 GI:2511573
Length = 235
Score = 69.7 bits (163), Expect = 2e-12
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = +3
Query: 261 HIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRYDKRPL 440
+IG+ SG+ D R+L R R + + + P+PV +L+ MQ TQ RP
Sbjct: 71 NIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPF 130
Query: 441 GVGLLVAGYDDQGPHIYQTCPSAT 512
GV LLVAGYDD+GP +YQ PS +
Sbjct: 131 GVSLLVAGYDDKGPQLYQVDPSGS 154
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +1
Query: 67 NQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSEL 225
+QY +T +SP G+L Q+E+A+ AV G ++G+K + V+ K+ S L
Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSIL 56
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 509 NYFDCRAMAIGARSQSARTYLEKHLNTFMDCDLQELVAHGLRALRDTLPNEV 664
+YF +A A+G +A+T+LEK D +L + + + L++ E+
Sbjct: 154 SYFSWKASAMGKNVSNAKTFLEKRYTE--DMELDDAIHTAILTLKEGFEGEI 203
>At1g79210.1 68414.m09235 20S proteasome alpha subunit B, putative
nearly identical to SP|O23708 Proteasome subunit alpha
type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B)
{Arabidopsis thaliana} and to At1g16470
Length = 235
Score = 68.1 bits (159), Expect = 5e-12
Identities = 35/84 (41%), Positives = 47/84 (55%)
Frame = +3
Query: 261 HIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRYDKRPL 440
+IG SG+ D R+L R R + + + P+PV +L+ MQ TQ RP
Sbjct: 71 NIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPF 130
Query: 441 GVGLLVAGYDDQGPHIYQTCPSAT 512
GV LLVAGYDD+GP +YQ PS +
Sbjct: 131 GVSLLVAGYDDKGPQLYQVDPSGS 154
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +1
Query: 67 NQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSEL 225
+QY +T +SP G+L Q+E+A+ AV G ++G+K + V+ K+ S L
Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSIL 56
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 509 NYFDCRAMAIGARSQSARTYLEKHLNTFMDCDLQELVAHGLRALRDTLPNEV 664
+YF +A A+G +A+T+LEK D +L + + + L++ E+
Sbjct: 154 SYFSWKASAMGKNVSNAKTFLEKRYTE--DMELDDAIHTAILTLKEGFEGEI 203
>At5g66140.1 68418.m08332 20S proteasome alpha subunit D2 (PAD2)
(PRS1) (PRC6) identical to SP|O24616 Proteasome subunit
alpha type 7-2 (EC 3.4.25.1) (20S proteasome alpha
subunit D2) {Arabidopsis thaliana}
Length = 250
Score = 65.3 bits (152), Expect = 4e-11
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Frame = +3
Query: 228 RISEENYSYDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQ 407
R + + S D HI ++ +GL ADAR+L R EC +HR + + P+ V + + Q
Sbjct: 58 RSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQ 117
Query: 408 ICTQRYDKRPLGVGLLVAGYDDQG--PHIYQTCPSAT 512
TQ RP G+ L+ G+D P +YQT PS T
Sbjct: 118 KYTQSGGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGT 154
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = +1
Query: 70 QYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSEL--SAYQKK 243
+YD +TV+SP G L QVEYA+EAV+ G+A +G++ D VL K++ +L S +K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARK 62
Query: 244 IIPMMN 261
I+ + N
Sbjct: 63 IVSLDN 68
>At3g51260.1 68416.m05611 20S proteasome alpha subunit D (PAD1)
Length = 250
Score = 64.1 bits (149), Expect = 8e-11
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = +3
Query: 228 RISEENYSYDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQ 407
R + + S D HI ++ +GL ADAR+L R EC +HR + + P+ V + + Q
Sbjct: 58 RSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQ 117
Query: 408 ICTQRYDKRPLGVGLLVAGYD--DQGPHIYQTCPSAT 512
TQ RP G+ L+ G+D + P +YQT PS T
Sbjct: 118 KYTQSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGT 154
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = +1
Query: 70 QYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSEL--SAYQKK 243
+YD +TV+SP G L QVEYA+EAV+ G+A +G++ D VL K++ +L S +K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARK 62
Query: 244 IIPMMN 261
I+ + N
Sbjct: 63 IVSLDN 68
>At3g22110.1 68416.m02791 20S proteasome alpha subunit C (PAC1)
(PRC9) identical to GB:AAC32057 from [Arabidopsis
thaliana] (Genetics (1998) 149 (2), 677-692); identical
to cDNA proteasome subunit prc9 GI:2511583
Length = 250
Score = 62.5 bits (145), Expect = 2e-10
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Frame = +3
Query: 183 LCGVDSVETRCERIVRISEENYSYDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAP 362
L G V ++ + +E+ Y D+H+ +++G+ +DA +L R + + + + P
Sbjct: 45 LIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEP 104
Query: 363 MPVGRLISSVGNKMQICTQRYDKRPLGVGLLVAGYD-DQGPHIYQTCPS 506
MPV +L+ S+ + Q TQ RP GV L AG+D G +Y + PS
Sbjct: 105 MPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPS 153
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = +1
Query: 70 QYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSEL 225
+YDS T++SP+GRL+QVEYAMEA+ + IG+ +KD VLI K+ S+L
Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKL 55
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +2
Query: 485 YLPDLSVSNYFDCRAMAIGARSQSARTYLEKHLNTFMDCDLQELVAHGLRALRDTL 652
Y+ D S NY +A A+GA +Q+A++ L++ D +E V L+ L T+
Sbjct: 148 YMSDPS-GNYGGWKAAAVGANNQAAQSILKQDYKD--DATREEAVELALKVLTKTM 200
>At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1)
(PRC1) identical to proteasome subunit alpha type 6-1
SP:O81146 GI:12643647 from [Arabidopsis thaliana];
identical to cDNA proteasome subunit prc1 GI:2511587
Length = 246
Score = 61.3 bits (142), Expect = 6e-10
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +3
Query: 258 EHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRYDKRP 437
++IG+ +G+TADAR L + R + R+++ MPV L + +K Q+ TQ RP
Sbjct: 74 KYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRP 133
Query: 438 LGVGLLVAGYDDQ-GPHIYQTCPS 506
LGV +V G D++ GP +Y+ P+
Sbjct: 134 LGVVAMVMGVDEENGPLLYKCDPA 157
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +1
Query: 73 YDSDVTVWSPQGRLHQVEYAMEAVK-LGSATIGLKNKDYAVLIALKRAVSEL 225
YD +T++SP+GRL QVEYA +AVK G +IG++ KD ++ K+ +L
Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKL 60
>At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1)
(PRC8) identical to proteasome subunit alpha type 3
SP:O23715, GI:12644056 from [Arabidopsis thaliana];
identical to cDNA proteasome subunit prc8 GI:2511591
Length = 249
Score = 61.3 bits (142), Expect = 6e-10
Identities = 27/87 (31%), Positives = 47/87 (54%)
Frame = +3
Query: 246 YSYDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRY 425
+S H G++++GL AD R + ++E ++ + +PV L V + + +CT +
Sbjct: 68 HSVHRHAGMAVAGLAADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYW 127
Query: 426 DKRPLGVGLLVAGYDDQGPHIYQTCPS 506
RP G G+++ GYD GP +Y PS
Sbjct: 128 WLRPFGCGVILGGYDRDGPQLYMIEPS 154
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +1
Query: 73 YDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSEL 225
YD VT +SP GR+ Q+EYA +AV +G+K KD V+ K S++
Sbjct: 8 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVVGIKCKDGIVMGVEKLIASKM 58
>At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2)
identical to GB:AF043519
Length = 246
Score = 58.4 bits (135), Expect = 4e-09
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +3
Query: 258 EHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRYDKRP 437
+++G+ +G+TAD+R L + R E R+ + MP L + +K Q+ TQ RP
Sbjct: 74 KYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQHAYMRP 133
Query: 438 LGVGLLVAGYDDQ-GPHIYQTCPS 506
LGV +V G D++ GP +Y+ P+
Sbjct: 134 LGVVAMVLGIDEERGPLLYKCDPA 157
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +1
Query: 73 YDSDVTVWSPQGRLHQVEYAMEAVK-LGSATIGLKNKDYAVLIALKRAVSEL 225
YD +T++SP+GRL QVEYA +AVK G +IG++ KD ++ K+ +L
Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
>At3g09930.1 68416.m01188 GDSL-motif lipase/hydrolase family protein
similar to SP|P40602 Anther-specific proline-rich
protein APG precursor {Arabidopsis thaliana}; contains
Pfam profile: PF00657 lipase acylhydrolase with
GDSL-like motif
Length = 354
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 157 ATIGLKNKDYAVLIALKRAVSELSAYQKKIIPMMNI 264
A + + DYA +ALKR ++EL A+ K+++ + +
Sbjct: 161 ALVSVAGNDYATFLALKRPLTELPAFMKQVVDQIAV 196
>At3g26340.1 68416.m03286 20S proteasome beta subunit E, putative
very strong similarity to SP|O23717 Proteasome subunit
beta type 5 precursor (EC 3.4.25.1) (20S proteasome
subunit E) (Proteasome epsilon chain) {Arabidopsis
thaliana}
Length = 273
Score = 32.7 bits (71), Expect = 0.23
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 273 SISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRYDKRPLG--V 446
+++G AD + R + +C H ++ R IS G + Y R +G V
Sbjct: 101 TMAGGAADCQFWHRNLGIKCRLHELANK------RRISVSGASKLLANMLYSYRGMGLSV 154
Query: 447 GLLVAGYDDQGPHIY 491
G ++AG+D+ GP +Y
Sbjct: 155 GTMIAGWDETGPGLY 169
>At1g13060.1 68414.m01514 20S proteasome beta subunit E1 (PBE1)
(PRCE) identical to GB:O23717; identical to cDNA
proteasome subunit prce GI:2511595
Length = 274
Score = 32.7 bits (71), Expect = 0.23
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 273 SISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRYDKRPLG--V 446
+++G AD + R + +C H ++ R IS G + Y R +G V
Sbjct: 101 TMAGGAADCQFWHRNLGIKCRLHELANK------RRISVSGASKLLANMLYSYRGMGLSV 154
Query: 447 GLLVAGYDDQGPHIY 491
G ++AG+D+ GP +Y
Sbjct: 155 GTMIAGWDETGPGLY 169
>At3g22630.1 68416.m02857 20S proteasome beta subunit D (PBD1)
(PRGB) identical to GB:CAA74026 from [Arabidopsis
thaliana] ( FEBS Lett. (1997) 416 (3), 281-285);
identical to cDNA proteasome subunit prgb GI:2511589
Length = 204
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 255 DEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRYDKR 434
D H ++ SG D + Y++ +++ + P+ + ++ + K
Sbjct: 39 DSHKLVAASGEPGDRVQFTEYVQKNVSLYKFRNGIPLTTAAAANFTRGELATALR---KN 95
Query: 435 PLGVGLLVAGYDDQ-GPHIY 491
P V +L+AGYDD+ G +Y
Sbjct: 96 PYSVNILMAGYDDESGASLY 115
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 485 YLPDLSVSNYFDCRAMAIGARSQSARTYLEKHLNTFMDCDLQELVAHGLRALRDTLPNEV 664
Y+ D S NY +A A+GA +Q+A++ L++ D +E+V ++ L T+ +
Sbjct: 370 YMSDPS-GNYGGWQAAAVGANNQAAQSILKQDYKD--DATREEVVQLAIKVLSKTMTARL 426
Query: 665 D 667
D
Sbjct: 427 D 427
>At4g14800.1 68417.m02275 20S proteasome beta subunit D2 (PBD2)
(PRCGA) identical to SP|O24633 Proteasome subunit beta
type 2-2 (EC 3.4.25.1) (20S proteasome alpha subunit D2)
{Arabidopsis thaliana}, cDNA proteasome subunit prcga
GI:2511571
Length = 199
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +3
Query: 255 DEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRYDKR 434
D H ++ SG D + Y++ +++ + P+ + ++ + K
Sbjct: 39 DSHKLVAASGEPGDRVQFTEYVQKNVSLYQFRNGIPLSTAAAANFTRGELATALR---KN 95
Query: 435 PLGVGLLVAGYD-DQGPHIY 491
P V +L+AGYD + G +Y
Sbjct: 96 PYSVNILMAGYDKEAGASLY 115
>At3g07490.1 68416.m00893 calcium-binding protein, putative similar
to calcium-binding protein GI:6580549 from [Lotus
japonicus]
Length = 153
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 604 VTIHECIEMLLKIGTR*LRTCSDCHRTTIKVVADG 500
+T+ E +L +G + RT DC R KV DG
Sbjct: 94 ITVEELRSVLASLGLKQGRTLEDCKRMISKVDVDG 128
>At5g03610.1 68418.m00320 GDSL-motif lipase/hydrolase family protein
low similarity to SP|P40602 Anther-specific proline-rich
protein APG precursor {Arabidopsis thaliana}; contains
Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase
Length = 359
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 157 ATIGLKNKDYAVLIALKRAVSELSAYQKKIIPMMNI 264
A + + DY+ IAL R SE A+ K+++ +
Sbjct: 164 ALVSVAGNDYSNFIALNRPASEFPAFIKQVVDQTEV 199
>At3g60620.1 68416.m06783 phosphatidate cytidylyltransferase family
protein contains Pfam profile: PF01148 phosphatidate
cytidylyltransferase
Length = 399
Score = 27.5 bits (58), Expect = 8.6
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Frame = +3
Query: 264 IGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLI--SSVGNKMQICTQRYDKRP 437
I ++ +TA AR S + + N + H+ + + SS+ ++ Q ++ KR
Sbjct: 55 ISVNRRVITAVARAESNQIGDDA-NSKEEHNIDQELQNVEEDSSLDDQKQKSRSQFKKRV 113
Query: 438 ---LGVGLLVAGYDDQGPHIYQTCPSATTLIVVRWQSEHVRSQRV 563
LG+GL V G G ++ +A L+ R E VRS+ +
Sbjct: 114 TFGLGIGLSVGGIVLAGGWVFTVAVAAAVLLSAREYFELVRSKGI 158
>At2g32990.1 68415.m04043 glycosyl hydrolase family 9 protein
similar to endo-beta-1,4-glucanase GI:4972236 from
[Fragaria x ananassa]
Length = 525
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 453 LVAGYDDQGPHIYQTCPSATTLIVVRW 533
LV GY D G H+ P A T+ ++ W
Sbjct: 83 LVGGYHDAGDHVKFGLPMAFTVTMLSW 109
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,256,784
Number of Sequences: 28952
Number of extensions: 294228
Number of successful extensions: 847
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -