Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060236.seq
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   5.1  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   6.7  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   6.7  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   6.7  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.9  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   8.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.9  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   8.9  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 141 QYGRHRTSQHPTAVPEC 191
           QY RH+ + + T  P+C
Sbjct: 342 QYVRHKNTPYHTPEPDC 358


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 357 MRALLENFCVYHVNA 401
           + ALLE F +YH  A
Sbjct: 147 LSALLEGFTLYHTTA 161


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 357 MRALLENFCVYHVNA 401
           + ALLE F +YH  A
Sbjct: 147 LSALLEGFTLYHTTA 161


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 357 MRALLENFCVYHVNA 401
           + ALLE F +YH  A
Sbjct: 147 LSALLEGFTLYHTTA 161


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +3

Query: 372 ENFCVYHVNAPGQEEGAPSLPEDYMYPSM 458
           ENF  Y  N    EE + S P    YP M
Sbjct: 144 ENFQQYDNNNFSAEENSVSEPPANFYPWM 172


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +3

Query: 372 ENFCVYHVNAPGQEEGAPSLPEDYMYPSM 458
           ENF  Y  N    EE + S P    YP M
Sbjct: 144 ENFQQYDNNNFSAEENSVSEPPANFYPWM 172


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 405 GQEEGAPSLPEDYMYPSMDELANQ 476
           G   GA S PE+  +PS+  +  Q
Sbjct: 88  GSIPGASSTPENKTFPSIQVMGYQ 111


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +3

Query: 372 ENFCVYHVNAPGQEEGAPSLPEDYMYPSM 458
           ENF  Y  N    EE + S P    YP M
Sbjct: 144 ENFQQYDNNNFSAEENSVSEPPANFYPWM 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,184
Number of Sequences: 336
Number of extensions: 3309
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)