Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060236.seq
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132847-2|CAB63372.1|  343|Caenorhabditis elegans Hypothetical ...    91   5e-19
Z68135-1|CAA92227.1|  325|Caenorhabditis elegans Hypothetical pr...    51   8e-07
Z84574-8|CAE54891.1|  921|Caenorhabditis elegans Hypothetical pr...    31   0.94 
Z84574-7|CAB06544.3|  928|Caenorhabditis elegans Hypothetical pr...    31   0.94 
Z84574-1|CAE54890.1|  577|Caenorhabditis elegans Hypothetical pr...    31   0.94 
AL022593-4|CAE54889.1|  921|Caenorhabditis elegans Hypothetical ...    31   0.94 
AL022593-3|CAA18635.3|  928|Caenorhabditis elegans Hypothetical ...    31   0.94 
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p...    29   3.8  
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p...    29   3.8  
Z50109-9|CAA90440.2|  367|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U46668-4|AAA93348.3|  951|Caenorhabditis elegans Nematode astaci...    29   3.8  
Z92833-2|CAB07379.1|  891|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z82288-7|CAB05326.1|  390|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AF003135-8|AAK18984.1|  235|Caenorhabditis elegans Hypothetical ...    28   6.7  

>AL132847-2|CAB63372.1|  343|Caenorhabditis elegans Hypothetical
           protein Y48G10A.3 protein.
          Length = 343

 Score = 91.5 bits (217), Expect = 5e-19
 Identities = 42/91 (46%), Positives = 61/91 (67%), Gaps = 4/91 (4%)
 Frame = +3

Query: 258 VAVQGDRNKPA---IITYHDLGLNY-SSFQPFFGYVDMRALLENFCVYHVNAPGQEEGAP 425
           V++ GDRN P    ++T+HDLGL+  S+FQ FF +V +    + FC+Y+VNAPGQE  A 
Sbjct: 38  VSIYGDRNDPKKVPMVTFHDLGLDSESNFQNFFQFVSIAEFADKFCIYNVNAPGQEMDAQ 97

Query: 426 SLPEDYMYPSMDELANQLNYVMGHFRASDFI 518
            LPE++ YP+MD +A  +  V  HF+ + FI
Sbjct: 98  PLPENFTYPTMDGIAKTIESVADHFKLNQFI 128



 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 22/44 (50%), Positives = 28/44 (63%)
 Frame = +1

Query: 520 GFRVGAGANVLAXIALXXPKKVDALTMINCTSXQAGLIEWGYPK 651
           GF VG GANVL   A     +V AL ++NC S ++G +EWGY K
Sbjct: 129 GFGVGVGANVLLRYAAQNQNRVIALVLVNCCSGKSGWVEWGYEK 172


>Z68135-1|CAA92227.1|  325|Caenorhabditis elegans Hypothetical
           protein ZK1073.1 protein.
          Length = 325

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 27/91 (29%), Positives = 42/91 (46%)
 Frame = +3

Query: 282 KPAIITYHDLGLNYSSFQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLPEDYMYPSMD 461
           K  I+T HD+G N+ SF  F  +  M  + E     HV  PGQE+ +     D  +P++D
Sbjct: 33  KTIILTVHDIGTNHKSFVRFVNHPSMATVKEKAIFLHVCVPGQEDNSADFFGD--FPTLD 90

Query: 462 ELANQLNYVMGHFRASDFIRIPRGRWSERAC 554
            + + L+ V+  F     I    G  +   C
Sbjct: 91  GIGDDLSAVLDKFEVKSAIAFGEGVGANIIC 121



 Score = 39.5 bits (88), Expect = 0.002
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = +1

Query: 523 FRVGAGANVLAXIALXXPKKVDALTMINCTSXQAGLIEW 639
           F  G GAN++   A+  P ++  + +++CTS  AG+IE+
Sbjct: 111 FGEGVGANIICRFAMGHPNRIMGIVLVHCTSTTAGIIEY 149


>Z84574-8|CAE54891.1|  921|Caenorhabditis elegans Hypothetical
           protein F33E2.2b protein.
          Length = 921

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
 Frame = +3

Query: 249 RHLVAVQGDRNKPAIITYHDLGLN------YSSFQPFFGYVDMRALLE 374
           +++VA  G+ +KP++ +++  GL       +S FQP FGY   +  +E
Sbjct: 72  KNMVAATGNASKPSLNSFYADGLGQLRNGLFSCFQPVFGYFGTKTTVE 119


>Z84574-7|CAB06544.3|  928|Caenorhabditis elegans Hypothetical
           protein F33E2.2a protein.
          Length = 928

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
 Frame = +3

Query: 249 RHLVAVQGDRNKPAIITYHDLGLN------YSSFQPFFGYVDMRALLE 374
           +++VA  G+ +KP++ +++  GL       +S FQP FGY   +  +E
Sbjct: 72  KNMVAATGNASKPSLNSFYADGLGQLRNGLFSCFQPVFGYFGTKTTVE 119


>Z84574-1|CAE54890.1|  577|Caenorhabditis elegans Hypothetical
           protein F33E2.2c protein.
          Length = 577

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
 Frame = +3

Query: 249 RHLVAVQGDRNKPAIITYHDLGLN------YSSFQPFFGYVDMRALLE 374
           +++VA  G+ +KP++ +++  GL       +S FQP FGY   +  +E
Sbjct: 72  KNMVAATGNASKPSLNSFYADGLGQLRNGLFSCFQPVFGYFGTKTTVE 119


>AL022593-4|CAE54889.1|  921|Caenorhabditis elegans Hypothetical
           protein F33E2.2b protein.
          Length = 921

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
 Frame = +3

Query: 249 RHLVAVQGDRNKPAIITYHDLGLN------YSSFQPFFGYVDMRALLE 374
           +++VA  G+ +KP++ +++  GL       +S FQP FGY   +  +E
Sbjct: 72  KNMVAATGNASKPSLNSFYADGLGQLRNGLFSCFQPVFGYFGTKTTVE 119


>AL022593-3|CAA18635.3|  928|Caenorhabditis elegans Hypothetical
           protein F33E2.2a protein.
          Length = 928

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
 Frame = +3

Query: 249 RHLVAVQGDRNKPAIITYHDLGLN------YSSFQPFFGYVDMRALLE 374
           +++VA  G+ +KP++ +++  GL       +S FQP FGY   +  +E
Sbjct: 72  KNMVAATGNASKPSLNSFYADGLGQLRNGLFSCFQPVFGYFGTKTTVE 119


>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
           protein F30A10.10 protein.
          Length = 1262

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 288 RACYGLLAQRRDVAAVSAHPHL 223
           +ACYGLL +RRD      HP L
Sbjct: 420 KACYGLLYRRRDAFKPLPHPKL 441


>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
           protein F30A10.10 protein.
          Length = 1262

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 288 RACYGLLAQRRDVAAVSAHPHL 223
           +ACYGLL +RRD      HP L
Sbjct: 420 KACYGLLYRRRDAFKPLPHPKL 441


>Z50109-9|CAA90440.2|  367|Caenorhabditis elegans Hypothetical
           protein C09H10.9 protein.
          Length = 367

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
 Frame = +2

Query: 26  LHAYEIKML*IVKLNINYFQEQHLEY--FKWYTLRWKLFQAVWTTSNFATSNCSSR-VLA 196
           ++A+EI ++ I +   N  Q    +Y   K+ T+R  +FQA+    +      S   VL 
Sbjct: 267 VNAFEISLIRITEAGTNKAQGV-CKYPDNKFTTIRTPVFQAMNLQEDKENLKLSDHPVLL 325

Query: 197 GLVEKPLVLRCG 232
           G++ KP +++CG
Sbjct: 326 GILSKPPIVKCG 337


>U46668-4|AAA93348.3|  951|Caenorhabditis elegans Nematode astacin
           protease protein39 protein.
          Length = 951

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
 Frame = +3

Query: 345 GYV---DMRALLENFCVYHVNAPGQEEGAPSLPEDY 443
           GY+   D     E  C + VNAP  +  +P+ P DY
Sbjct: 677 GYILAEDKHNCKEGSCFFEVNAPAGDINSPNYPNDY 712


>Z92833-2|CAB07379.1|  891|Caenorhabditis elegans Hypothetical
           protein F38A6.2 protein.
          Length = 891

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 22/66 (33%), Positives = 28/66 (42%)
 Frame = +1

Query: 238 TDRGDISSLCKETVTSPPS*PIMTSASTTRHFNRSSDTSI*GLCSKTFACTMSTLQAKRK 417
           TDR    S   E  TS    PI+ S       +R S  S+  LCS   + + ST    RK
Sbjct: 175 TDRFRRLSTSSEASTSATMNPIVNSVRRLSTTHRQSSPSLLSLCS-VISRSPSTSSILRK 233

Query: 418 APRACR 435
             R C+
Sbjct: 234 NNRTCQ 239


>Z82288-7|CAB05326.1|  390|Caenorhabditis elegans Hypothetical
           protein ZK896.9 protein.
          Length = 390

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +1

Query: 112 VYFEMETVSGSMDDIELRNIQLQFPS 189
           +YFE + + GS   I +RNIQL FPS
Sbjct: 230 IYFE-KILKGSNVSIWIRNIQLAFPS 254


>AF003135-8|AAK18984.1|  235|Caenorhabditis elegans Hypothetical
           protein W03F11.1 protein.
          Length = 235

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/83 (21%), Positives = 29/83 (34%)
 Frame = +3

Query: 372 ENFCVYHVNAPGQEEGAPSLPEDYMYPSMDELANQLNYVMGHFRASDFIRIPRGRWSERA 551
           EN CV            P+      Y +  E A    Y    +   +F +   G W++R+
Sbjct: 128 ENMCVAIQTTYRPTRTWPTTTTTPYYGACKESAGHDGYKPDVYNCKNFYQCASGLWTQRS 187

Query: 552 C*XRSYXXQEGRCADHDQLHIXP 620
           C   +   Q     DH++    P
Sbjct: 188 CGEGTIWDQHKLTCDHNRGQCRP 210


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,441,528
Number of Sequences: 27780
Number of extensions: 332677
Number of successful extensions: 929
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)