Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060236.seq
(653 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 27 0.12
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 2.6
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 4.5
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 4.5
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 4.5
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 4.5
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 4.5
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 4.5
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 4.5
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 6.0
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 6.0
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 6.0
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 6.0
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 6.0
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 22 6.0
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 6.0
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 6.0
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 7.9
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 7.9
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 7.9
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 7.9
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 7.9
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 7.9
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 7.9
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 7.9
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 7.9
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 7.9
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 7.9
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 7.9
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 7.9
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 7.9
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 7.9
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 7.9
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 27.5 bits (58), Expect = 0.12
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 312 GLNYSSFQPFFGYVDMRALLENFCVYHV 395
G N S+ FGY DMR NF VY V
Sbjct: 273 GSNSSTVGTIFGYQDMRNRGNNFPVYQV 300
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +3
Query: 384 VYHVNAPGQEEGAPSLPEDYMYPSMD 461
+Y P ++ + P +YMYP++D
Sbjct: 507 LYDTREPVDQQLSGISPRNYMYPNID 532
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R+T
Sbjct: 47 QKSYKNENSYRKYRKT 62
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R+T
Sbjct: 47 QKSYKNENSYRKYRKT 62
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R+T
Sbjct: 47 QKSYKNENSYRKYRKT 62
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R+T
Sbjct: 47 QKSYKNENSYRKYRKT 62
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R+T
Sbjct: 47 QKSYKNENSYRKYRKT 62
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R+T
Sbjct: 47 QKSYKNENSYRKYRKT 62
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 22.2 bits (45), Expect = 4.5
Identities = 15/51 (29%), Positives = 19/51 (37%)
Frame = +2
Query: 11 PFSSDLHAYEIKML*IVKLNINYFQEQHLEYFKWYTLRWKLFQAVWTTSNF 163
P SS A + M + KL +E W TL W W S+F
Sbjct: 61 PISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDF 111
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 47 KKSYKNENSYRKYRET 62
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 47 KKSYKNENSYRKYRET 62
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 47 KKSYKNENSYRKYRET 62
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 47 KKSYKNENSYRKYRET 62
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRTVEMTSS*GRGHDR 298
+KS++ E YR R T S RG R
Sbjct: 295 QKSYKNEREYREYRETSRERSRDRRGRGR 323
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 21.8 bits (44), Expect = 6.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 382 ACTMSTLQAKRKAPRACRKTICIHRWTSWR 471
AC + L KA C K +CI R TS++
Sbjct: 59 ACAANCLSLG-KAGGHCEKGVCICRKTSFK 87
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 280 KKSYKNENSYRKYRET 295
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 372 RAEPSYRRIRRTVEMTSS*GRGHDR 298
R P Y+R R T E ++ R +DR
Sbjct: 154 RHHPRYKRPRTTFEPRATDSRHYDR 178
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 47 QKSYKNENSYRKYRET 62
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 47 QKSYKNENSYRKYRET 62
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 47 QKSYKNENSYRKYRET 62
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 47 QKSYKNENSYRKYRET 62
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 47 QKSYKNENSYRKYRET 62
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 47 QKSYKNENSYRKYRET 62
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 455 RWIHIVFRQARGAFLL 408
RW+ +VF Q FLL
Sbjct: 335 RWVRVVFIQVLPRFLL 350
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 280 QKSYKNENSYRKYRET 295
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 269 QKSYKNENSYRKYRET 284
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 280 QKSYKNENSYRKYRET 295
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 280 QKSYKNENSYRKYRET 295
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 269 QKSYKNENSYRKYRET 284
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 280 QKSYKNENSYRKYRET 295
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 285 QKSYKNENSYRKYRET 300
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 280 QKSYKNENSYRKYRET 295
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 384 RKSFRAEPSYRRIRRT 337
+KS++ E SYR+ R T
Sbjct: 280 QKSYKNENSYRKYRET 295
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,121
Number of Sequences: 438
Number of extensions: 3829
Number of successful extensions: 35
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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