Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060235.seq
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    27   0.10 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.9  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   6.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   6.7  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   6.7  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   6.7  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 16/57 (28%), Positives = 22/57 (38%)
 Frame = +2

Query: 140  SVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTVWCFCVAKSHPKLTWIIK 310
            ++GEG P K       A + A +    D          T+ C  V    P +TW IK
Sbjct: 1287 TIGEGQPSKKVTVSPSASVPAKIASFDDTFTTTYKEDVTLPCLAVGLPPPVITWKIK 1343


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 390  HHTACLVIKAFGRIIITNMFDRFAHNFLII 301
            HH    +IK+F  I    +   F  NFLII
Sbjct: 1308 HHHLSKLIKSFNEIYGVPLLLFFGLNFLII 1337



 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +2

Query: 245 ITKTVWCFCVAKSHPKLTWI 304
           IT+T++  CV     ++ W+
Sbjct: 611 ITQTIFIICVIVQSEQIAWL 630


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 550 IRKIAELKRNGEFWWARPDSKNTGY 624
           I ++ +   NG FW    D+   GY
Sbjct: 373 IFRLPDENNNGGFWVGYEDTDTAGY 397


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -1

Query: 127 QKY*SIFHIITVSVGFRVSIHF*SLRHSEFRV 32
           QK+ ++   + +S+G  VSI+  S   +E  +
Sbjct: 32  QKFYAVAFFLALSIGVVVSIYSKSFHRNEIHI 63


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 649 TTSKYIFASNLCFLNLVLPTKILHFA 572
           T  KY +  N+C LNL + T   +FA
Sbjct: 51  TNRKYYWL-NVCCLNLSIVTIFFNFA 75


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 253 FSYGFTCNFCVRILIQ 206
           + Y  TC FC+ +L +
Sbjct: 497 YLYRMTCLFCINVLAE 512


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,502
Number of Sequences: 336
Number of extensions: 4134
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)