Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060235.seq
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 169 2e-42
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 169 2e-42
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 166 1e-41
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 163 7e-41
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 161 4e-40
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 153 1e-37
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 118 3e-27
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 115 3e-26
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 91 6e-19
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical pr... 44 7e-05
AF099920-2|AAL32226.2| 437|Caenorhabditis elegans Hypothetical ... 30 1.6
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 28 5.0
Z81491-5|CAB04021.1| 225|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF000198-4|AAB53058.2| 175|Caenorhabditis elegans Hypothetical ... 27 8.8
AC024785-6|AAF60605.2| 467|Caenorhabditis elegans C-type lectin... 27 8.8
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 169 bits (410), Expect = 2e-42
Identities = 78/119 (65%), Positives = 95/119 (79%)
Frame = +1
Query: 256 GMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVH 435
GM++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 51 GMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVH 110
Query: 436 ENRNDEEVGAGDQGLMFGYATDETENACR*L*CLHTNSIRKIAELKRNGEFWWARPDSK 612
+++ ++VGAGDQG+MFGYATDETE A L RK+ EL+R+GE W RPDSK
Sbjct: 111 VDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSK 169
Score = 91.1 bits (216), Expect = 6e-19
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = +2
Query: 122 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKT 256
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKT
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKT 50
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 169 bits (410), Expect = 2e-42
Identities = 78/119 (65%), Positives = 95/119 (79%)
Frame = +1
Query: 256 GMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVH 435
GM++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 51 GMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVH 110
Query: 436 ENRNDEEVGAGDQGLMFGYATDETENACR*L*CLHTNSIRKIAELKRNGEFWWARPDSK 612
+++ ++VGAGDQG+MFGYATDETE A L RK+ EL+R+GE W RPDSK
Sbjct: 111 VDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSK 169
Score = 91.1 bits (216), Expect = 6e-19
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = +2
Query: 122 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKT 256
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKT
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKT 50
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 166 bits (404), Expect = 1e-41
Identities = 77/118 (65%), Positives = 94/118 (79%)
Frame = +1
Query: 259 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 438
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 439 NRNDEEVGAGDQGLMFGYATDETENACR*L*CLHTNSIRKIAELKRNGEFWWARPDSK 612
+++ ++VGAGDQG+MFGYATDETE A L RK+ EL+R+GE W RPDSK
Sbjct: 61 DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSK 118
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 163 bits (397), Expect = 7e-41
Identities = 77/119 (64%), Positives = 93/119 (78%)
Frame = +1
Query: 256 GMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVH 435
GM++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 51 GMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVH 110
Query: 436 ENRNDEEVGAGDQGLMFGYATDETENACR*L*CLHTNSIRKIAELKRNGEFWWARPDSK 612
+++ +VGAGDQG+MFGYATDETE A L K+ EL+R+GE W RPDSK
Sbjct: 111 VDKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSK 169
Score = 91.1 bits (216), Expect = 6e-19
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = +2
Query: 122 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKT 256
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKT
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKT 50
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 161 bits (391), Expect = 4e-40
Identities = 76/118 (64%), Positives = 92/118 (77%)
Frame = +1
Query: 259 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 438
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 439 NRNDEEVGAGDQGLMFGYATDETENACR*L*CLHTNSIRKIAELKRNGEFWWARPDSK 612
+++ +VGAGDQG+MFGYATDETE A L K+ EL+R+GE W RPDSK
Sbjct: 61 DKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSK 118
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 153 bits (371), Expect = 1e-37
Identities = 72/120 (60%), Positives = 91/120 (75%)
Frame = +1
Query: 256 GMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVH 435
GMV+LCGEITSKA VDYQ +VR ++ IG+ DSS GFD+KTC+V++AL+QQSP IAAGVH
Sbjct: 50 GMVMLCGEITSKAVVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVH 109
Query: 436 ENRNDEEVGAGDQGLMFGYATDETENACR*L*CLHTNSIRKIAELKRNGEFWWARPDSKN 615
N++ E+VGAGDQG+MFGYATDETE L ++ +L+RNG W RPDSK+
Sbjct: 110 VNKDGEDVGAGDQGIMFGYATDETEETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKS 169
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = +2
Query: 116 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKT 256
S FLFTSESV EGHPDKMCDQISDA+LDAHL QDP+AKVACET+TKT
Sbjct: 3 SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKT 49
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 118 bits (285), Expect = 3e-27
Identities = 55/91 (60%), Positives = 68/91 (74%)
Frame = +1
Query: 340 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETENAC 519
GY D GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDETE A
Sbjct: 20 GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAM 79
Query: 520 R*L*CLHTNSIRKIAELKRNGEFWWARPDSK 612
L RK+ EL+R+GE W RPDSK
Sbjct: 80 PLTLLLSHKLNRKLHELRRSGELEWVRPDSK 110
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 115 bits (276), Expect = 3e-26
Identities = 55/96 (57%), Positives = 70/96 (72%), Gaps = 3/96 (3%)
Frame = +1
Query: 334 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE 504
H+ D +K GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDE
Sbjct: 33 HLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDE 92
Query: 505 TENACR*L*CLHTNSIRKIAELKRNGEFWWARPDSK 612
TE A L RK+ EL+R+GE W RPDSK
Sbjct: 93 TEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSK 128
Score = 80.2 bits (189), Expect = 1e-15
Identities = 37/45 (82%), Positives = 38/45 (84%)
Frame = +2
Query: 122 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKT 256
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC KT
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACGFDYKT 50
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 91.1 bits (216), Expect = 6e-19
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = +2
Query: 122 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKT 256
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKT
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKT 50
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +1
Query: 256 GMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKG 363
GM++LCGEITSKA VDYQ +VR +K IGYDDSSKG
Sbjct: 51 GMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKG 86
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +2
Query: 122 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 238
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical
protein C06E7.1b protein.
Length = 84
Score = 44.4 bits (100), Expect = 7e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 122 FLFTSESVGEGHPDKMCDQ 178
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>AF099920-2|AAL32226.2| 437|Caenorhabditis elegans Hypothetical
protein H06H21.6 protein.
Length = 437
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 125 LFTSESVGEGHPDKMCDQISDA--ILDAHLNQDPDAKVACETITKTVWCFCVAKSHPKLT 298
L+TSE +GE H D + D L +++ D + I + + + K HPK T
Sbjct: 123 LYTSELLGEHHIRSKADLLEDIKNFLSDQISEADDEN--DKVIAAVLMLYSLNKKHPKET 180
Query: 299 WIIKKLCAKRSNIL 340
I+ +C NIL
Sbjct: 181 -AIETICKYCQNIL 193
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +2
Query: 287 PKLTWIIKKLCAKRSNIL---VMMIRPKALITRH 379
PK+ W ++K+C K+ +I + I P+ L+T H
Sbjct: 253 PKIVWHLEKMCNKKEDISRGNPVSIPPQRLLTHH 286
>Z81491-5|CAB04021.1| 225|Caenorhabditis elegans Hypothetical
protein D1086.5 protein.
Length = 225
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 161 DKMCDQISDAILDAHLNQDPDAKVACETITKTVWCF 268
+K DQ+S+ + D N++PD KV C +I CF
Sbjct: 122 EKTPDQVSECVKDYLKNKNPD-KVDCVSIQTKSKCF 156
>AF000198-4|AAB53058.2| 175|Caenorhabditis elegans Hypothetical
protein T28F2.2 protein.
Length = 175
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 296 TWIIKKLCAKRSNILVMMIRPKALITRHAV*CSH 397
+W+++++C SN+ V+ + H V C H
Sbjct: 5 SWLLEEICTNFSNLTVLKFKELCNRASHLVLCGH 38
>AC024785-6|AAF60605.2| 467|Caenorhabditis elegans C-type lectin
protein 74 protein.
Length = 467
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 583 EFWWARPDSKNTGYLRICICWW 648
E +W P S NTGY + + W
Sbjct: 393 ELYWRNPSSTNTGYFGMPVASW 414
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,166,240
Number of Sequences: 27780
Number of extensions: 388291
Number of successful extensions: 1091
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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