Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060234.seq
(538 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g51860.1 68414.m05846 leucine-rich repeat protein kinase, put... 33 0.12
At5g19000.1 68418.m02257 speckle-type POZ protein-related contai... 31 0.49
At1g01640.2 68414.m00082 speckle-type POZ protein-related contai... 30 0.85
At1g01640.1 68414.m00081 speckle-type POZ protein-related contai... 30 0.85
At5g15630.1 68418.m01829 phytochelatin synthetase family protein... 29 2.0
At3g27480.1 68416.m03436 DC1 domain-containing protein contains ... 29 2.0
At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta... 29 2.0
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta... 29 2.0
At5g60920.1 68418.m07642 phytochelatin synthetase, putative / CO... 29 2.6
At2g39760.1 68415.m04882 speckle-type POZ protein-related contai... 29 2.6
At1g30370.1 68414.m03713 lipase class 3 family protein similar t... 28 3.4
At5g15430.1 68418.m01806 calmodulin-binding protein-related has ... 28 4.5
At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ... 28 4.5
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 28 4.5
At1g21660.1 68414.m02711 expressed protein low similarity to SP|... 28 4.5
At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family pr... 27 6.0
At3g46800.1 68416.m05080 DC1 domain-containing protein contains ... 27 6.0
At3g29810.1 68416.m03794 phytochelatin synthetase family protein... 27 6.0
At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ... 27 6.0
At1g23160.1 68414.m02894 auxin-responsive GH3 family protein sim... 27 6.0
At5g13320.1 68418.m01531 auxin-responsive GH3 family protein sim... 27 7.9
>At1g51860.1 68414.m05846 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 890
Score = 33.1 bits (72), Expect = 0.12
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +3
Query: 336 FAEMKSLLDFMYKGEVNVGQNMLPMFLK---TAESLQVRGLTENNTLNPKSEERSTPVV 503
FAEMKSL G N+ +P L+ ++SL + L EN TL PK E + P+V
Sbjct: 455 FAEMKSLKLINLSGNPNLNLTAIPDSLQQRVNSKSLTLI-LGENLTLTPKKESKKVPMV 512
>At5g19000.1 68418.m02257 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 442
Score = 31.1 bits (67), Expect = 0.49
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 151 NNLTDVLASLLQREALCDVTLACDGETVKAHQTI 252
+NL L +LL+ CDV DGET AH+ +
Sbjct: 187 SNLGQQLGNLLESGKGCDVVFQVDGETFNAHKLV 220
>At1g01640.2 68414.m00082 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 30.3 bits (65), Expect = 0.85
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +3
Query: 303 PHPIIFLKDVRFAEMKSLLDFMYKGEVNVGQNMLPMFLKTAESLQVRGLTE 455
P I L D+ E+KSLL+F+Y G + N A+ + L +
Sbjct: 64 PEESITLPDLSHDELKSLLEFLYSGNLKAPYNQYRSLYLAADKYDISYLQD 114
>At1g01640.1 68414.m00081 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 30.3 bits (65), Expect = 0.85
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +3
Query: 303 PHPIIFLKDVRFAEMKSLLDFMYKGEVNVGQNMLPMFLKTAESLQVRGLTE 455
P I L D+ E+KSLL+F+Y G + N A+ + L +
Sbjct: 64 PEESITLPDLSHDELKSLLEFLYSGNLKAPYNQYRSLYLAADKYDISYLQD 114
>At5g15630.1 68418.m01829 phytochelatin synthetase family protein /
COBRA cell expansion protein COBL4 similar to
phytochelatin synthetase [Hordeum vulgare subsp.
vulgare] GI:29570314; identified in Roudier, et al,
Plant Phys. (2002) 130:538-548 (PMID:12376623); contains
Pfam profile PF04833: Phytochelatin synthetase-like
conserved region
Length = 431
Score = 29.1 bits (62), Expect = 2.0
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 152 LGWLFQRKQNCWSIVGANVSER 87
LGW + +K+ WS+VGA +E+
Sbjct: 66 LGWTWAKKEVIWSMVGAQTTEQ 87
>At3g27480.1 68416.m03436 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 604
Score = 29.1 bits (62), Expect = 2.0
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +3
Query: 117 PAILLALEQPP*QSDRC-ACESSAKRGSL*CHSRL*WRDSQGTPDNISACSPYFESIFLQ 293
P L LEQ C AC G + H D+ GT D + CS + F+
Sbjct: 435 PLHLSVLEQSDDSPTACSACLQVCSEGFVYDH------DTYGTFDLL--CSS-IDVPFIH 485
Query: 294 NSHPHPIIFLK 326
SHPHP+++LK
Sbjct: 486 GSHPHPLLYLK 496
>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 252 ISACSPYFESIFLQN-SHPHP-IIFLKDVRFAEMKSLLDFMYKGEVNV 389
+S S F +F S H I+L DV K++++FMY GE+N+
Sbjct: 371 LSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGELNM 418
>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 252 ISACSPYFESIFLQN-SHPHP-IIFLKDVRFAEMKSLLDFMYKGEVNV 389
+S S F +F S H I+L DV K++++FMY GE+N+
Sbjct: 371 LSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGELNM 418
>At5g60920.1 68418.m07642 phytochelatin synthetase, putative / COBRA
cell expansion protein COB, putative similar to
phytochelatin synthetase GI:29570314; similar to
GB:AAK56072; identified in Roudier, et al, Plant Phys.
(2002) 130:538-548 (PMID:12376623); identical to cDNA
putative phytochelatin synthetase GI:3559804; contains
Pfam profile PF04833: Phytochelatin synthetase-like
conserved region
Length = 456
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 152 LGWLFQRKQNCWSIVGANVSER 87
LGW + +K+ WS+VGA +E+
Sbjct: 82 LGWKWAKKEVIWSMVGAQTTEQ 103
>At2g39760.1 68415.m04882 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 408
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 151 NNLTDVLASLLQREALCDVTLACDGETVKAHQTIFQHAHHILKA 282
+N+ L LL E CD+ ET KAH+ I + +A
Sbjct: 178 SNMGQGLKDLLDSEVGCDIAFQVGDETYKAHKLILAARSPVFRA 221
>At1g30370.1 68414.m03713 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile: PF01764: Lipase
Length = 529
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = -1
Query: 469 FN-VLFSVKPLTCKLSAVFRNIGS-IFWPTFTSPLYIKSSND 350
FN VL + P+T +L+ V+R++G+ + F+SP Y+K +D
Sbjct: 396 FNKVLNKLNPITSRLNWVYRHVGTQLKLDVFSSP-YVKRDSD 436
>At5g15430.1 68418.m01806 calmodulin-binding protein-related has
weak similarity to calmodulin-binding proteins
Length = 478
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 240 CLDCLSITSESDITESLSLQKTRKHIG 160
C CL ES+ + S+ L+KTRKH+G
Sbjct: 227 CSRCLKTKKESN-SLSVPLKKTRKHVG 252
>At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 467
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 163 DVLASLLQREALCDVTLACDGETVKAHQTIFQHAHHILKAYSCK 294
D L L+ +A DVT + +G V AH+ I + + C+
Sbjct: 15 DYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCE 58
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 355 NDFISANRTSLRNIMGCGCEFCRNMLS 275
NDF+SA+ +++ EFC NMLS
Sbjct: 350 NDFVSASADNIKKFSLPKGEFCHNMLS 376
>At1g21660.1 68414.m02711 expressed protein low similarity to
SP|O14976 Cyclin G-associated kinase (EC 2.7.1.-) {Homo
sapiens}; supporting cDNA gi|20466222|gb|AY099577.1|
Length = 523
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 410 VPKNCRKFTSXRFDREQYIESEVGRAIDASSGRENLSRAE 529
+P + R+DREQ +S V +A+ + R++ SR E
Sbjct: 378 IPGESEERRKARWDREQRTKSRVAQAVADMNNRDHQSRIE 417
>At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 709
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/66 (21%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 258 ACSPYFESIF--LQNSHPHPIIFLKDVRFAEMKSLLDFMYKGEVNVGQNMLPMFLKTAES 431
A S F ++F L + + ++R+ + ++ F+Y G +N+ +++ L A+
Sbjct: 560 ASSDIFRAMFDGLYKERNAQNVEIPNIRWEVFELMMKFIYSGRINIAKHLAKDLLVAADQ 619
Query: 432 LQVRGL 449
+ GL
Sbjct: 620 YLLEGL 625
>At3g46800.1 68416.m05080 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 682
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 261 CSPYFESIFLQNSHPHPIIF 320
CS +E FL SHPHP+ F
Sbjct: 499 CSSIYEP-FLHESHPHPLYF 517
>At3g29810.1 68416.m03794 phytochelatin synthetase family protein /
COBRA cell expansion protein COBL2 similar to
phytochelatin synthetase [Hordeum vulgare subsp.
vulgare] GI:29570314; identified in Roudier, et al,
Plant Phys. (2002) 130:538-548 (PMID:12376623); contains
Pfam profile PF04833: Phytochelatin synthetase-like
conserved region
Length = 441
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 152 LGWLFQRKQNCWSIVGANVSER 87
LGW + +K+ WS+VG +E+
Sbjct: 74 LGWSWMKKEVIWSMVGGQATEQ 95
>At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 491
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 163 DVLASLLQREALCDVTLACDGETVKAHQTIFQHAHHILKAYSC 291
D L L+ +A DVT + +G V AH+ I + + C
Sbjct: 14 DFLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFC 56
>At1g23160.1 68414.m02894 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591, auxin-responsive GH3 homologue [Arabidopsis
thaliana] GI:11041726; contains Pfam profile PF03321:
GH3 auxin-responsive promoter
Length = 578
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 321 LKDVRFAEMKSLLDFMYKGEVNVGQNMLPMFLKTAESLQVRGLTEN 458
+K VR SL+D+ ++GQ P +K+ ++L+V L EN
Sbjct: 527 IKVVRQGTFDSLMDYFISQGASIGQYKTPRCIKSGKALEV--LEEN 570
>At5g13320.1 68418.m01531 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 575
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 321 LKDVRFAEMKSLLDFMYKGEVNVGQNMLPMFLKTAESLQV 440
++ VR SL+DF + GQ P +K+ ++LQV
Sbjct: 524 IRVVRQGTFDSLMDFFISQGASTGQYKTPRCIKSGKALQV 563
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,629,025
Number of Sequences: 28952
Number of extensions: 269531
Number of successful extensions: 876
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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