Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060231.seq
         (670 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    25   2.9  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   5.0  
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       23   6.6  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    23   6.6  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   6.6  
AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA fact...    23   6.6  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   8.7  

>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = +1

Query: 262 QVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGF 381
           +VISS+Q        H A   GIP  K V  + RL G GF
Sbjct: 752 EVISSTQHP-TEIQHHVAQTLGIPASKVVSRVKRL-GGGF 789


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 572 HGHDRREARSPV 607
           HGH+ R+ RSPV
Sbjct: 557 HGHNARDCRSPV 568


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = +3

Query: 378 FPIDREQRSGHFDRRSQDLSSGGSREHVASALRGQKREVRHGSG 509
           FP +           S D+  G S  +  +A  GQ++E   G+G
Sbjct: 441 FPHEDHYSQPQLQPSSTDIRRGTSNSNNINAATGQQQEPARGAG 484


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 190 DDSHGWCLEGGRSVPGSGRQHGVGQ 264
           DD +G    GGR   G GR  G G+
Sbjct: 61  DDGYGGGGRGGRGGRGGGRGRGRGR 85


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = +3

Query: 564 GLPMGMTAEKLGAQFGITRDE---VGQLRS 644
           GLP G+    L AQ  + RD+   V QL++
Sbjct: 488 GLPQGVVMNPLDAQCNVQRDDAICVSQLKN 517


>AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA factor
           protein.
          Length = 77

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 245 RPEPGTLRPPSRHQ 204
           R  PGT RPP+R Q
Sbjct: 27  RQNPGTNRPPNRSQ 40


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 493 FGTALAPTTPSKTPSGPDS 549
           + +AL+P++ S +PS P S
Sbjct: 61  YASALSPSSSSASPSSPSS 79


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,932
Number of Sequences: 2352
Number of extensions: 14823
Number of successful extensions: 48
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)