Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060231.seq
(670 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative ... 54 7e-08
At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative ... 54 7e-08
At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative ... 54 7e-08
At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative ... 54 9e-08
At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative ... 54 9e-08
At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative ... 51 8e-07
At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 / 3-keto... 47 1e-05
At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 / 3-keto... 47 1e-05
At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative ... 46 2e-05
At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative ... 45 5e-05
At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger) fa... 31 0.52
At4g31630.1 68417.m04493 transcriptional factor B3 family protei... 30 1.2
At1g53050.1 68414.m06007 protein kinase family protein contains ... 29 2.1
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 29 2.1
At4g17270.1 68417.m02596 Mo25 family protein similar to MO25 pro... 29 3.7
At1g63850.1 68414.m07227 PRLI-interacting factor-related similar... 29 3.7
At1g34190.1 68414.m04241 no apical meristem (NAM) family protein... 28 4.9
At5g26630.1 68418.m03177 MADS-box protein (AGL35) homeotic prote... 27 8.5
At1g76460.1 68414.m08893 RNA recognition motif (RRM)-containing ... 27 8.5
>At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 405
Score = 54.4 bits (125), Expect = 7e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +1
Query: 304 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMSQAPFAVR 483
R AAL AGIP IN++C +G +S++ ++Q I G I VAGG+E+MS P +
Sbjct: 78 RQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVPKYLP 137
Query: 484 NVRFGTALAPTT 519
+ R G+ L T
Sbjct: 138 DARRGSRLGHDT 149
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +2
Query: 92 SASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSM 253
S + + +VG RTP G F G + +AT L +IA ALK A V PA V+ +
Sbjct: 9 SLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEV 62
>At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 415
Score = 54.4 bits (125), Expect = 7e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +1
Query: 304 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMSQAPFAVR 483
R AAL AGIP IN++C +G +S++ ++Q I G I VAGG+E+MS P +
Sbjct: 78 RQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVPKYLP 137
Query: 484 NVRFGTALAPTT 519
+ R G+ L T
Sbjct: 138 DARRGSRLGHDT 149
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +2
Query: 92 SASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSM 253
S + + +VG RTP G F G + +AT L +IA ALK A V PA V+ +
Sbjct: 9 SLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEV 62
>At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 405
Score = 54.4 bits (125), Expect = 7e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +1
Query: 304 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMSQAPFAVR 483
R AAL AGIP IN++C +G +S++ ++Q I G I VAGG+E+MS P +
Sbjct: 78 RQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVPKYLP 137
Query: 484 NVRFGTALAPTT 519
+ R G+ L T
Sbjct: 138 DARRGSRLGHDT 149
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +2
Query: 92 SASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSM 253
S + + +VG RTP G F G + +AT L +IA ALK A V PA V+ +
Sbjct: 9 SLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEV 62
>At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 403
Score = 54.0 bits (124), Expect = 9e-08
Identities = 30/81 (37%), Positives = 46/81 (56%)
Frame = +1
Query: 259 GQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISV 438
G V+S++ G R AAL AGIP +N++C SG ++++ +AQ I G + V
Sbjct: 63 GNVLSANL--GQAPARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQLGINDVVV 120
Query: 439 AGGVENMSQAPFAVRNVRFGT 501
AGG+E+MS P + R G+
Sbjct: 121 AGGMESMSNTPKYLAEARKGS 141
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +2
Query: 92 SASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMAW 259
S + + + IVG RTP G F G + AT+L ++A ALK A V PA V + +
Sbjct: 7 SVNPRDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEVVF 62
>At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 398
Score = 54.0 bits (124), Expect = 9e-08
Identities = 30/81 (37%), Positives = 46/81 (56%)
Frame = +1
Query: 259 GQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISV 438
G V+S++ G R AAL AGIP +N++C SG ++++ +AQ I G + V
Sbjct: 58 GNVLSANL--GQAPARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQLGINDVVV 115
Query: 439 AGGVENMSQAPFAVRNVRFGT 501
AGG+E+MS P + R G+
Sbjct: 116 AGGMESMSNTPKYLAEARKGS 136
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +2
Query: 89 MSASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMAW 259
M+ + IVG RTP G F G + AT+L ++A ALK A V PA V + +
Sbjct: 1 MNVDESDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEVVF 57
>At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 406
Score = 50.8 bits (116), Expect = 8e-07
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = +1
Query: 304 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMSQAP 471
R AAL AGIP IN++C +G +S++ ++Q I G I VAGG+E+MS P
Sbjct: 78 RQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVP 133
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +2
Query: 92 SASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSM 253
S + + +VG RTP G F G + +AT L +IA ALK A V PA V+ +
Sbjct: 9 SLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEV 62
>At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 /
3-ketoacyl-CoA thiolase 1 (PKT1) identical to
3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana]
GI:3169568
Length = 457
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/69 (39%), Positives = 35/69 (50%)
Frame = +1
Query: 256 VGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKIS 435
VG VI+ + R AA AG P PV +NR C SG Q++ + A I G I
Sbjct: 101 VGTVIAPGSQRAMEC-RVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIG 159
Query: 436 VAGGVENMS 462
+ GVE+MS
Sbjct: 160 IGAGVESMS 168
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 561 CGLPMGMTAEKLGAQFGITRDE 626
C LPMG+T+E + +FG+TR+E
Sbjct: 193 CLLPMGITSENVAERFGVTREE 214
>At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 /
3-ketoacyl-CoA thiolase 1 (PKT1) identical to
3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana]
GI:3169568
Length = 414
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/69 (39%), Positives = 35/69 (50%)
Frame = +1
Query: 256 VGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKIS 435
VG VI+ + R AA AG P PV +NR C SG Q++ + A I G I
Sbjct: 58 VGTVIAPGSQRAMEC-RVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIG 116
Query: 436 VAGGVENMS 462
+ GVE+MS
Sbjct: 117 IGAGVESMS 125
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 561 CGLPMGMTAEKLGAQFGITRDE 626
C LPMG+T+E + +FG+TR+E
Sbjct: 150 CLLPMGITSENVAERFGVTREE 171
>At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 443
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +1
Query: 304 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMSQAP 471
R AA AG P+ P+ +NR C SG Q++ + A I G I + G+E+M+ P
Sbjct: 109 RMAAFYAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNP 164
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 561 CGLPMGMTAEKLGAQFGITRDEVGQ 635
C LPMG+T+E + +F ++R+E Q
Sbjct: 184 CLLPMGITSENVAHRFNVSREEQDQ 208
>At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 462
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +1
Query: 304 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMSQAPFA 477
R AA AG P+ V +NR C SG Q++ + A I G I + G+E+M+ P A
Sbjct: 117 RMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMA 174
Score = 31.5 bits (68), Expect = 0.52
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 561 CGLPMGMTAEKLGAQFGITRDEVGQ 635
C LPMG+T+E + +FG++R E Q
Sbjct: 192 CLLPMGVTSENVAQRFGVSRQEQDQ 216
>At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 396
Score = 31.5 bits (68), Expect = 0.52
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 417 RRSQDLSSGGSREHVASALRGQKREVRHGSGTNYAF 524
R ++ S+G E+V +A RG++ EVR G+G ++F
Sbjct: 324 RNVRETSNGNVVENVGNADRGREDEVRSGNGRRFSF 359
>At4g31630.1 68417.m04493 transcriptional factor B3 family protein
similar to reproductive meristem gene 1 from [Brassica
oleracea var. botrytis] GI:3170424, [Arabidopsis
thaliana] GI:13604227; contains Pfam profile PF02362: B3
DNA binding domain
Length = 512
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 572 HGHDRREARSPVRNHQRRSWTITLYNRNRSGR 667
+G DRRE +R+ +SWT+ L + ++G+
Sbjct: 194 NGLDRRECEIDLRDEHEKSWTLLLRHNKKTGQ 225
>At1g53050.1 68414.m06007 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 694
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 223 RSVPGSGRQHGVGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGS 375
RS GR++ SS D P AA + G PQ++ G+ RL GS
Sbjct: 549 RSASAKGRRNYQDSQKVSSIADYSAMPGFAATRTGAPQQETCRGMTRLPGS 599
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 667 SSTSVAIVERNCPTSSLVIPNWAPSFSAVMPMGSPQYESESPA 539
SS ++ + + P + IP+ AP FSA +P+G Q S + A
Sbjct: 222 SSPAMPVPQPLFPVVNNSIPSQAPPFSAPLPVGGAQQPSHADA 264
>At4g17270.1 68417.m02596 Mo25 family protein similar to MO25
protein (early mouse development protein family) [Mouse]
SWISS-PROT:Q06138
Length = 343
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +2
Query: 257 WAKSSLHHKLTESTRHVTRRSKL-----VFLKRSRCSASTDYAALVSN 385
W + + KL EST ++TRR + + L RS + T Y + + N
Sbjct: 213 WFFADYNSKLLESTNYITRRQAIKLLGDILLDRSNSAVMTKYVSSMDN 260
>At1g63850.1 68414.m07227 PRLI-interacting factor-related similar to
PRLI-interacting factor G (GI:11139264) [Arabidopsis
thaliana]; contains Prosite PS00037: Myb DNA-binding
domain repeat signature 1
Length = 548
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -2
Query: 210 APTVAIVCSSVADVLRKTPPKVPNGVLLAPTMKIPLTEADMIQNYTYPVN 61
+PT+ + +S AD + K P ++ NGVL +P+ + A T VN
Sbjct: 56 SPTLFEMMASEADTIGKVPVQIHNGVLPSPSSSSSSSSAAATAARTTNVN 105
>At1g34190.1 68414.m04241 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) protein;
similar to NAM protein GI:6066595 [Petunia hybrida];
nam-like protein 9 (GI:21105746) [Petunia x hybrida];
NAC1 GI:7716952 [Medicago truncatula]
Length = 557
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 5/90 (5%)
Frame = +3
Query: 354 HQQTMRLWFPIDRE---QRSGHFDRRSQDLSSGGSREHV--ASALRGQKREVRHGSGTNY 518
+Q T +WF D+ + F SSG + ++ Q E+++G GT
Sbjct: 404 NQITSDIWFEDDQAILFDQQQSFSGAFASPSSGVMPDSTNPTMSVNAQGHEIQNGGGTTS 463
Query: 519 AFEDTLWAGLSDSYCGLPMGMTAEKLGAQF 608
F LWA L DS P L F
Sbjct: 464 QFSSALWA-LMDSIPSTPASACEGPLNRTF 492
>At5g26630.1 68418.m03177 MADS-box protein (AGL35) homeotic protein
boi1AP3, Brassica oleracea, EMBL:U67453; contains Pfam
profile PF00319: SRF-type transcription factor
(DNA-binding and dimerisation domain)
Length = 218
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -1
Query: 655 VAIVERNCPTSSLVIPNWAPSFSAVMPM 572
+ I++RN SS ++P AP+ S+VMP+
Sbjct: 153 IEILKRNNEPSSALVPVAAPTTSSVMPV 180
>At1g76460.1 68414.m08893 RNA recognition motif (RRM)-containing
protein low similarity to RRM-containing protein SEB-4
[Xenopus laevis] GI:8895698; contains Pfam profile:
PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP
domain)
Length = 285
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 181 RTADDSHGWCLEGGRSVPGSGRQHGVGQVISSSQTDGIYTPRHAALKAGIPQEKPV 348
+T + HG+ G SVPGS G +S+ T + A +GIP PV
Sbjct: 207 QTIPNGHGYTAVQGYSVPGSHILQLGGPTVSTMTTSSM-PALQAPYPSGIPGPAPV 261
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,675,348
Number of Sequences: 28952
Number of extensions: 313110
Number of successful extensions: 997
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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