Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060230.seq
(655 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q83950 Cluster: ATP-dependent DNA helicase P143; n=17; ... 109 4e-23
UniRef50_P41656 Cluster: Uncharacterized 19.8 kDa protein in P14... 77 4e-13
UniRef50_Q80LM4 Cluster: Helicase; n=1; Adoxophyes honmai NPV|Re... 47 5e-04
UniRef50_A0EYX7 Cluster: Helicase; n=2; Nucleopolyhedrovirus|Rep... 47 5e-04
UniRef50_Q77LZ8 Cluster: Helicase; n=5; Nucleopolyhedrovirus|Rep... 43 0.006
UniRef50_Q9YMN0 Cluster: Helicase; n=1; Lymantria dispar MNPV|Re... 42 0.017
UniRef50_Q8V5R6 Cluster: ORF88; n=14; Nucleopolyhedrovirus|Rep: ... 41 0.023
UniRef50_Q8IAQ2 Cluster: Putative uncharacterized protein MAL8P1... 36 0.64
UniRef50_A1YJ62 Cluster: DNA helicase; n=8; Nucleopolyhedrovirus... 36 0.85
UniRef50_Q0IL18 Cluster: Helicase; n=2; Nucleopolyhedrovirus|Rep... 35 2.0
UniRef50_Q0IL17 Cluster: ORF102; n=3; Nucleopolyhedrovirus|Rep: ... 35 2.0
UniRef50_A2DTE6 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_A5DHF5 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_P11799 Cluster: Myosin light chain kinase, smooth muscl... 33 4.5
UniRef50_P15442 Cluster: Serine/threonine-protein kinase GCN2; n... 33 4.5
UniRef50_Q0EZS6 Cluster: Glutamyl-tRNA reductase; n=1; Mariprofu... 33 6.0
UniRef50_UPI0000DB7AF0 Cluster: PREDICTED: similar to CG7922-PA;... 33 7.9
>UniRef50_Q83950 Cluster: ATP-dependent DNA helicase P143; n=17;
Nucleopolyhedrovirus|Rep: ATP-dependent DNA helicase
P143 - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 1223
Score = 109 bits (263), Expect = 4e-23
Identities = 53/109 (48%), Positives = 73/109 (66%)
Frame = +1
Query: 256 IRNTRTGTRRLFEYVNNFQQFLNTIRNNFNGPCAKHDMGSSCEDTEEATEKQAVQQTLDG 435
I +T TGTRRL E+V+NF++FLNTIR++ G CA+H + +D EEA A + + G
Sbjct: 31 IIDTDTGTRRLLEHVSNFRRFLNTIRSDAAGACARHQRAARHDDEEEAPP--AARVSFAG 88
Query: 436 HDWVLESNDFCIFVKPFILKKHYEAYKNILILKIFSRAPTLDTLTKCVQ 582
H VLE+NDFC+FVKPF+LK+HY+ KN L L F ++ + CVQ
Sbjct: 89 HSLVLENNDFCVFVKPFLLKRHYDEIKNYLKLDRFFKSDNPEHTNMCVQ 137
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/41 (56%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 533 KFFQEHRPWIH*QNVCKRA-DYYYWPNWPKGQAFSFNGWQL 652
+FF+ P H N+C +A DY YWPNWP QA SF GWQL
Sbjct: 122 RFFKSDNPE-H-TNMCVQAGDYCYWPNWPASQAVSFTGWQL 160
>UniRef50_P41656 Cluster: Uncharacterized 19.8 kDa protein in
P143-LEF5 intergenic region; n=13;
Nucleopolyhedrovirus|Rep: Uncharacterized 19.8 kDa
protein in P143-LEF5 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 173
Score = 77.0 bits (181), Expect = 4e-13
Identities = 32/35 (91%), Positives = 35/35 (100%)
Frame = -2
Query: 111 KNHHPFLHRIKTLIKDFNNTLLFGAYIQIYDLSTP 7
KNHHPFLHRI+TLI+DFNNTLLFGAY+QIYDLSTP
Sbjct: 23 KNHHPFLHRIETLIQDFNNTLLFGAYVQIYDLSTP 57
>UniRef50_Q80LM4 Cluster: Helicase; n=1; Adoxophyes honmai NPV|Rep:
Helicase - Adoxophyes honmai nucleopolyhedrovirus
Length = 1213
Score = 46.8 bits (106), Expect = 5e-04
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Frame = +1
Query: 256 IRNTRTGTRRLFEYVNNFQQFLNTIRNNF--NGPCAKHDMGSSCEDTEEATEKQAVQQTL 429
++N+ TG ++ E NF++ + + N+ NG + D S ++AT+ +++Q
Sbjct: 37 LKNSLTGEEKVVESNKNFEKLILVMSNHQTQNGLLQRRD--SRMATLKDATDDISIEQ-- 92
Query: 430 DGHDWVLESNDFCIFVKPFILKKHYEAYKNILILKIFSRAPTLDTLTKCVQ 582
H+W ++ N F I VKP I KK+Y + F + D CV+
Sbjct: 93 --HEWTVQGNYFIITVKPHIHKKYYSLVSKDINFSKFVESTDKDYSNYCVK 141
>UniRef50_A0EYX7 Cluster: Helicase; n=2; Nucleopolyhedrovirus|Rep:
Helicase - Ecotropis obliqua NPV
Length = 1251
Score = 46.8 bits (106), Expect = 5e-04
Identities = 30/109 (27%), Positives = 52/109 (47%)
Frame = +1
Query: 256 IRNTRTGTRRLFEYVNNFQQFLNTIRNNFNGPCAKHDMGSSCEDTEEATEKQAVQQTLDG 435
++N +++ + V NFQ+ L T+RN C K S C + + +
Sbjct: 38 LKNDVLQKKQIVKNVANFQRLLQTMRNETT-KCLK----SYCHNVHD--------HVIAP 84
Query: 436 HDWVLESNDFCIFVKPFILKKHYEAYKNILILKIFSRAPTLDTLTKCVQ 582
HDW ++ N F + V+PFI K+YE K+ + F ++ D +CV+
Sbjct: 85 HDWYVQGNCFIVMVRPFIENKYYETVKHNINFNQFLQSNKQDYGNECVK 133
>UniRef50_Q77LZ8 Cluster: Helicase; n=5; Nucleopolyhedrovirus|Rep:
Helicase - Helicoverpa armigera NPV
Length = 1253
Score = 43.2 bits (97), Expect = 0.006
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +1
Query: 421 QTLDGHDWVLESNDFCIFVKPFILKKHYEAYKNILILKIF 540
+++D HDW ++ N F I ++PFIL+++YEA ++ + F
Sbjct: 112 KSIDSHDWCVQGNYFAIKIRPFILQRYYEAVRDSISFSEF 151
>UniRef50_Q9YMN0 Cluster: Helicase; n=1; Lymantria dispar MNPV|Rep:
Helicase - Lymantria dispar multicapsid nuclear
polyhedrosis virus (LdMNPV)
Length = 1218
Score = 41.5 bits (93), Expect = 0.017
Identities = 28/101 (27%), Positives = 47/101 (46%)
Frame = +1
Query: 247 SFNIRNTRTGTRRLFEYVNNFQQFLNTIRNNFNGPCAKHDMGSSCEDTEEATEKQAVQQT 426
S +RN +R+ NFQ+ L + + AK S+ A + +
Sbjct: 35 SIILRNDVNQNKRVVRTYENFQKLLYALTD---ARTAK----SAAWGGAPAACFEGHDRC 87
Query: 427 LDGHDWVLESNDFCIFVKPFILKKHYEAYKNILILKIFSRA 549
++ HDW ++ N F + V+PFI ++HYE KN + F R+
Sbjct: 88 VEPHDWCVQDNCFVLMVRPFIERRHYERIKNEVDFTQFLRS 128
>UniRef50_Q8V5R6 Cluster: ORF88; n=14; Nucleopolyhedrovirus|Rep:
ORF88 - Helicoverpa zea SNPV
Length = 173
Score = 41.1 bits (92), Expect = 0.023
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = -2
Query: 102 HPFLHRIKTLIKDFNNTLLFGAYIQIYDLSTPRA 1
+P+ + +K LI+D TL FGAYI ++DLST A
Sbjct: 29 NPYRNNVKKLIEDHKRTLQFGAYIDVFDLSTSSA 62
>UniRef50_Q8IAQ2 Cluster: Putative uncharacterized protein
MAL8P1.135; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL8P1.135 - Plasmodium
falciparum (isolate 3D7)
Length = 965
Score = 36.3 bits (80), Expect = 0.64
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Frame = +1
Query: 268 RTGTRRLFEYVNNFQQFLNTIRNNFNGPCAKHDMGSSCED--TEEATEKQAVQQTLDGHD 441
RT + E +NN + +N ++NN N PC ++ + CE+ E+ +K + +
Sbjct: 268 RTTKEKNHEMINNNK--INNLKNNNNHPCNNYNSYNQCEERKNEDINDKPTNKYNKEISL 325
Query: 442 WVLESNDFCIFVKPFILKKHYEAYKNILILK--IFSR 546
+ L N + I FILKK + LIL+ IFS+
Sbjct: 326 FTLFKNLYIIKNWIFILKKGLTSIFIFLILRLIIFSK 362
>UniRef50_A1YJ62 Cluster: DNA helicase; n=8;
Nucleopolyhedrovirus|Rep: DNA helicase - Spodoptera
frugiperda nuclear polyhedrosis virus (SfNPV)
Length = 1228
Score = 35.9 bits (79), Expect = 0.85
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 436 HDWVLESNDFCIFVKPFILKKHYEAYKNILILKIFSRAPTLDTLTKCVQ 582
HDW N F +FV+PFI ++Y K+ + K F + KCV+
Sbjct: 87 HDWCARQNIFRMFVRPFIDAENYSRVKDQICFKKFISSNFPGYANKCVK 135
>UniRef50_Q0IL18 Cluster: Helicase; n=2; Nucleopolyhedrovirus|Rep:
Helicase - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 1251
Score = 34.7 bits (76), Expect = 2.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 430 DGHDWVLESNDFCIFVKPFILKKHYEAYKN 519
D H+W + N F + ++PF+ KHY+ K+
Sbjct: 134 DAHNWFVHGNYFAMKIRPFVRLKHYDIVKD 163
>UniRef50_Q0IL17 Cluster: ORF102; n=3; Nucleopolyhedrovirus|Rep:
ORF102 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 169
Score = 34.7 bits (76), Expect = 2.0
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -2
Query: 102 HPFLHRIKTLIKDFNNTLLFGAYIQIYDLS 13
+P+ +++ L+ D TL FGA++ +YDLS
Sbjct: 25 NPYRYQLDKLVNDHQETLHFGAFVDVYDLS 54
>UniRef50_A2DTE6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 399
Score = 33.9 bits (74), Expect = 3.4
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 465 LHF-CKTFHFEEAL*SIQKYINFENFFKSTDPGYINKMCASGPITI 599
LH+ CK FE + + Y+NF++F TD YIN S + I
Sbjct: 92 LHYACKGGSFEVVVYILNNYMNFKDFIVKTDANYINFALESNSVEI 137
>UniRef50_A5DHF5 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 916
Score = 33.9 bits (74), Expect = 3.4
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -3
Query: 518 FLYAS*CFFKM-KGFTKMQKSLLSNTQSWPSNVC*TACFSVASSVSSQDEPMSCFAH 351
FLY C ++ G +KM + NT P++V TAC ++A S + S AH
Sbjct: 434 FLYMKRCVLELASGLSKMNDEGMENTPELPADVALTACLNLAVSETWDTHIFSGIAH 490
>UniRef50_P11799 Cluster: Myosin light chain kinase, smooth muscle;
n=10; Euteleostomi|Rep: Myosin light chain kinase, smooth
muscle - Gallus gallus (Chicken)
Length = 1906
Score = 33.5 bits (73), Expect = 4.5
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 188 FLKDVPEDKTYEINNLQDANHLTLETREQEHADCLSTLTIFNSS*TQLETTLTV 349
F K + E++ +I N ++++ LT+ + +QEH C + + Q + LTV
Sbjct: 1261 FRKQIQENEYIKIENAENSSKLTISSTKQEHCGCYTLVVENKLGSRQAQVNLTV 1314
>UniRef50_P15442 Cluster: Serine/threonine-protein kinase GCN2; n=4;
Saccharomycetaceae|Rep: Serine/threonine-protein kinase
GCN2 - Saccharomyces cerevisiae (Baker's yeast)
Length = 1659
Score = 33.5 bits (73), Expect = 4.5
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 211 QNVRD*QLARCKSF--NIRNTRTGTRRLFEYVNNFQQFLNTIRNNFNGPCAKHDMGSSCE 384
QNV D QL KS I NT G +FE + Q+ L+ +N N + D +
Sbjct: 87 QNVMDSQLQMLKSEFKKIHNTSRGQEIIFEITSFTQEKLDEFQNVVNTQSLEDDRLQRIK 146
Query: 385 DTEEATEKQ 411
+T+E EK+
Sbjct: 147 ETKEQLEKE 155
>UniRef50_Q0EZS6 Cluster: Glutamyl-tRNA reductase; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Glutamyl-tRNA
reductase - Mariprofundus ferrooxydans PV-1
Length = 442
Score = 33.1 bits (72), Expect = 6.0
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 102 HPFLHRIKTLIKDFNNTLLFGAYIQIYDLSTPRA 1
HP L +KTL D LL GA +++DL P++
Sbjct: 391 HPTLRTLKTLPDDIEGDLLMGAATRLFDLDLPQS 424
>UniRef50_UPI0000DB7AF0 Cluster: PREDICTED: similar to CG7922-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG7922-PA
- Apis mellifera
Length = 825
Score = 32.7 bits (71), Expect = 7.9
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +2
Query: 158 AKMIDNILQFFLKDVPEDKTYEINNLQDANHLTLETREQEHADCLSTLTIFNSS 319
A+ I+NILQ + D ED EI++ + NH E EQ+ A+ S N S
Sbjct: 655 AENINNILQKSMSDKFEDILNEISDDSETNHTNHENFEQKEAEVSSNNETTNES 708
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,414,125
Number of Sequences: 1657284
Number of extensions: 12275578
Number of successful extensions: 34297
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 31609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34197
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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