Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060230.seq
         (655 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_51313| Best HMM Match : Pkinase (HMM E-Value=0.43)                  31   1.1  
SB_36542| Best HMM Match : Pox_A_type_inc (HMM E-Value=7.3e-11)        28   7.6  

>SB_51313| Best HMM Match : Pkinase (HMM E-Value=0.43)
          Length = 456

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 403 EKQAVQQTLDGHDWVLESNDFCIFVKPFILKKHYEAYKNI 522
           EKQ V   LDG  W +ES   C+ +  F L +  +  KN+
Sbjct: 175 EKQLVYM-LDGERWTVESRGLCVSLIDFTLSRLRKVKKNV 213


>SB_36542| Best HMM Match : Pox_A_type_inc (HMM E-Value=7.3e-11)
          Length = 1500

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +1

Query: 292 EYVNNFQQFLNTIRNNF-NGPCAKHDMGSSCEDTEEAT 402
           E  N+ Q+ L T+RNNF N   ++HD+       EE T
Sbjct: 516 ELNNSLQRQLETLRNNFINRSPSRHDLEELARLREEVT 553


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,898,131
Number of Sequences: 59808
Number of extensions: 407861
Number of successful extensions: 948
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)