Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060230.seq
         (655 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    27   0.39 
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    27   0.39 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   4.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   4.8  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 11/47 (23%), Positives = 27/47 (57%)
 Frame = +2

Query: 206  EDKTYEINNLQDANHLTLETREQEHADCLSTLTIFNSS*TQLETTLT 346
            ED+   ++  + +NH +++  ++  +DC+ T+T  +++ T   T  T
Sbjct: 1473 EDRVAMVDGTRSSNH-SIDNSQRAGSDCMGTITSISTTATTTVTATT 1518


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 11/47 (23%), Positives = 27/47 (57%)
 Frame = +2

Query: 206  EDKTYEINNLQDANHLTLETREQEHADCLSTLTIFNSS*TQLETTLT 346
            ED+   ++  + +NH +++  ++  +DC+ T+T  +++ T   T  T
Sbjct: 1470 EDRVAMVDGTRSSNH-SIDNSQRAGSDCMGTITSISTTATTTVTATT 1515


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = +1

Query: 253  NIRNTRTGTRRL-FEYVNNFQQFLNTIRNNFNGPCAKHDMGSSCEDTEEATEKQAVQQTL 429
            N ++  TG RR   EYV N  +  +  R NF       +     E  EE    +A  + +
Sbjct: 2422 NHQHFYTGFRRYRLEYVKNTNKISSVYRTNFAARSGLDETRYQVEHDEEGNVVRATHKGI 2481

Query: 430  D 432
            +
Sbjct: 2482 E 2482


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = +1

Query: 253  NIRNTRTGTRRL-FEYVNNFQQFLNTIRNNFNGPCAKHDMGSSCEDTEEATEKQAVQQTL 429
            N ++  TG RR   EYV N  +  +  R NF       +     E  EE    +A  + +
Sbjct: 2423 NHQHFYTGFRRYRLEYVKNTNKISSVYRTNFAARSGLDETRYQVEHDEEGNVVRATHKGI 2482

Query: 430  D 432
            +
Sbjct: 2483 E 2483


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,936
Number of Sequences: 2352
Number of extensions: 13772
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)