Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060228.seq
         (642 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.1  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   2.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   3.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   6.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.6  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 365 IPSNVNEFLLPFCCININIFTLL 297
           +P N ++  LP  CI  N   +L
Sbjct: 272 VPQNFHDIFLPLLCILTNTLEIL 294


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 365 IPSNVNEFLLPFCCININIFTLL 297
           +P N ++  LP  CI  N   +L
Sbjct: 97  VPQNFHDIFLPLLCILTNTLEIL 119


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 326 CININIFTLLYIYY 285
           C  I +FT+ YIYY
Sbjct: 148 CYFIYLFTVYYIYY 161


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 422 WPSPTLLYLESEESSI 469
           WP P  + L + ESSI
Sbjct: 78  WPKPVHIKLTNRESSI 93


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 536  FHPPISPTNSEEKL 577
            +HPPI PT+ +  L
Sbjct: 1374 WHPPIPPTSEKPPL 1387


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,090
Number of Sequences: 336
Number of extensions: 2568
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)