Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060227.seq
(492 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001411-1|AAH01411.1| 247|Homo sapiens ATPase, H+ transporting... 87 3e-17
AF145316-1|AAD33953.1| 247|Homo sapiens vacuolar proton pump de... 87 3e-17
AF104629-1|AAG30726.1| 247|Homo sapiens vacuolar H-ATPase subun... 87 3e-17
AF100741-1|AAD40384.1| 247|Homo sapiens vacuolar H-ATPase subun... 87 3e-17
AF077614-1|AAG43047.1| 247|Homo sapiens vacuolar ATP synthase s... 87 3e-17
BC031002-1|AAH31002.1| 247|Homo sapiens ATPase, H+ transporting... 86 5e-17
BC025373-1|AAH25373.1| 247|Homo sapiens ATPase, H+ transporting... 85 2e-16
AK001155-1|BAA91523.1| 135|Homo sapiens protein ( Homo sapiens ... 65 1e-10
>BC001411-1|AAH01411.1| 247|Homo sapiens ATPase, H+ transporting,
lysosomal 34kDa, V1 subunit D protein.
Length = 247
Score = 87.0 bits (206), Expect = 3e-17
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = +3
Query: 249 GXXMXEAAFSLAEAKXTTGXFNQVVLQNVTKAXIRLGPRRTMXLGVTLPIFESXHXGSDT 428
G M EAAFSLAEAK T G F+ V+QNV KA +++ ++ GVTLP+FE H G+D+
Sbjct: 59 GEVMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDS 118
Query: 429 YELAXLAPXXXQLAKLKK 482
YEL LA QLAKLK+
Sbjct: 119 YELTGLARGGEQLAKLKR 136
Score = 52.0 bits (119), Expect = 1e-06
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +1
Query: 76 MSGXXRLAXFPSRGAQMLIKGRXXXXXXXXXXXXXKADXLQVRXRMILSKIIETKTLMG 252
MSG R+ FPSR AQ ++K R K+D L +R R IL KIIETK LMG
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 59
>AF145316-1|AAD33953.1| 247|Homo sapiens vacuolar proton pump delta
polypeptide protein.
Length = 247
Score = 87.0 bits (206), Expect = 3e-17
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = +3
Query: 249 GXXMXEAAFSLAEAKXTTGXFNQVVLQNVTKAXIRLGPRRTMXLGVTLPIFESXHXGSDT 428
G M EAAFSLAEAK T G F+ V+QNV KA +++ ++ GVTLP+FE H G+D+
Sbjct: 59 GEVMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDS 118
Query: 429 YELAXLAPXXXQLAKLKK 482
YEL LA QLAKLK+
Sbjct: 119 YELTGLARGGEQLAKLKR 136
Score = 52.0 bits (119), Expect = 1e-06
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +1
Query: 76 MSGXXRLAXFPSRGAQMLIKGRXXXXXXXXXXXXXKADXLQVRXRMILSKIIETKTLMG 252
MSG R+ FPSR AQ ++K R K+D L +R R IL KIIETK LMG
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 59
>AF104629-1|AAG30726.1| 247|Homo sapiens vacuolar H-ATPase subunit
D protein.
Length = 247
Score = 87.0 bits (206), Expect = 3e-17
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = +3
Query: 249 GXXMXEAAFSLAEAKXTTGXFNQVVLQNVTKAXIRLGPRRTMXLGVTLPIFESXHXGSDT 428
G M EAAFSLAEAK T G F+ V+QNV KA +++ ++ GVTLP+FE H G+D+
Sbjct: 59 GEVMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDS 118
Query: 429 YELAXLAPXXXQLAKLKK 482
YEL LA QLAKLK+
Sbjct: 119 YELTGLARGGEQLAKLKR 136
Score = 52.0 bits (119), Expect = 1e-06
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +1
Query: 76 MSGXXRLAXFPSRGAQMLIKGRXXXXXXXXXXXXXKADXLQVRXRMILSKIIETKTLMG 252
MSG R+ FPSR AQ ++K R K+D L +R R IL KIIETK LMG
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 59
>AF100741-1|AAD40384.1| 247|Homo sapiens vacuolar H-ATPase subunit
D protein.
Length = 247
Score = 87.0 bits (206), Expect = 3e-17
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = +3
Query: 249 GXXMXEAAFSLAEAKXTTGXFNQVVLQNVTKAXIRLGPRRTMXLGVTLPIFESXHXGSDT 428
G M EAAFSLAEAK T G F+ V+QNV KA +++ ++ GVTLP+FE H G+D+
Sbjct: 59 GEVMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDS 118
Query: 429 YELAXLAPXXXQLAKLKK 482
YEL LA QLAKLK+
Sbjct: 119 YELTGLARGGEQLAKLKR 136
Score = 52.0 bits (119), Expect = 1e-06
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +1
Query: 76 MSGXXRLAXFPSRGAQMLIKGRXXXXXXXXXXXXXKADXLQVRXRMILSKIIETKTLMG 252
MSG R+ FPSR AQ ++K R K+D L +R R IL KIIETK LMG
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 59
>AF077614-1|AAG43047.1| 247|Homo sapiens vacuolar ATP synthase
subunit D homolog protein.
Length = 247
Score = 87.0 bits (206), Expect = 3e-17
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = +3
Query: 249 GXXMXEAAFSLAEAKXTTGXFNQVVLQNVTKAXIRLGPRRTMXLGVTLPIFESXHXGSDT 428
G M EAAFSLAEAK T G F+ V+QNV KA +++ ++ GVTLP+FE H G+D+
Sbjct: 59 GEVMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDS 118
Query: 429 YELAXLAPXXXQLAKLKK 482
YEL LA QLAKLK+
Sbjct: 119 YELTGLARGGEQLAKLKR 136
Score = 52.0 bits (119), Expect = 1e-06
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +1
Query: 76 MSGXXRLAXFPSRGAQMLIKGRXXXXXXXXXXXXXKADXLQVRXRMILSKIIETKTLMG 252
MSG R+ FPSR AQ ++K R K+D L +R R IL KIIETK LMG
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 59
>BC031002-1|AAH31002.1| 247|Homo sapiens ATPase, H+ transporting,
lysosomal 34kDa, V1 subunit D protein.
Length = 247
Score = 86.2 bits (204), Expect = 5e-17
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = +3
Query: 249 GXXMXEAAFSLAEAKXTTGXFNQVVLQNVTKAXIRLGPRRTMXLGVTLPIFESXHXGSDT 428
G M EAAFSLAEAK T G F+ V+QNV KA +++ ++ GVTLP+FE H G+D+
Sbjct: 59 GEVMREAAFSLAEAKFTAGDFSTTVIQNVHKAQVKIRAKKDNVAGVTLPVFEHYHEGTDS 118
Query: 429 YELAXLAPXXXQLAKLKK 482
YEL LA QLAKLK+
Sbjct: 119 YELTGLARGGEQLAKLKR 136
Score = 52.0 bits (119), Expect = 1e-06
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +1
Query: 76 MSGXXRLAXFPSRGAQMLIKGRXXXXXXXXXXXXXKADXLQVRXRMILSKIIETKTLMG 252
MSG R+ FPSR AQ ++K R K+D L +R R IL KIIETK LMG
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 59
>BC025373-1|AAH25373.1| 247|Homo sapiens ATPase, H+ transporting,
lysosomal 34kDa, V1 subunit D protein.
Length = 247
Score = 84.6 bits (200), Expect = 2e-16
Identities = 41/78 (52%), Positives = 52/78 (66%)
Frame = +3
Query: 249 GXXMXEAAFSLAEAKXTTGXFNQVVLQNVTKAXIRLGPRRTMXLGVTLPIFESXHXGSDT 428
G M EAAFSLAEA T G F+ V+QNV KA +++ ++ GVTLP+FE H G+D+
Sbjct: 59 GEVMREAAFSLAEAMFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDS 118
Query: 429 YELAXLAPXXXQLAKLKK 482
YEL LA QLAKLK+
Sbjct: 119 YELTGLARGGEQLAKLKR 136
Score = 52.0 bits (119), Expect = 1e-06
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +1
Query: 76 MSGXXRLAXFPSRGAQMLIKGRXXXXXXXXXXXXXKADXLQVRXRMILSKIIETKTLMG 252
MSG R+ FPSR AQ ++K R K+D L +R R IL KIIETK LMG
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 59
>AK001155-1|BAA91523.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ10293 fis, clone NT2RM1000280, highly similar to
VACUOLAR ATP SYNTHASE SUBUNIT D (EC 3.6.1.34). ).
Length = 135
Score = 65.3 bits (152), Expect = 1e-10
Identities = 30/60 (50%), Positives = 39/60 (65%)
Frame = +3
Query: 249 GXXMXEAAFSLAEAKXTTGXFNQVVLQNVTKAXIRLGPRRTMXLGVTLPIFESXHXGSDT 428
G M EAAFSLAEAK T G F+ V+QNV KA +++ ++ GVTLP+FE H G +
Sbjct: 59 GEVMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGQSS 118
Score = 51.2 bits (117), Expect = 2e-06
Identities = 27/59 (45%), Positives = 33/59 (55%)
Frame = +1
Query: 76 MSGXXRLAXFPSRGAQMLIKGRXXXXXXXXXXXXXKADXLQVRXRMILSKIIETKTLMG 252
MSG R+ FPSR AQ ++K R K+D + +R R IL KIIETK LMG
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDAITLRFRQILKKIIETKMLMG 59
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,298,819
Number of Sequences: 237096
Number of extensions: 795211
Number of successful extensions: 657
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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