Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060226.seq
         (644 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    27   0.67 
AY062205-1|AAL58566.1|  154|Anopheles gambiae cytochrome P450 CY...    24   4.7  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   4.7  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    24   4.7  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   8.3  

>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 26.6 bits (56), Expect = 0.67
 Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
 Frame = +3

Query: 51  ILTSSQQTARVCAGTGHRALTF---CSSQGSTFQAPAQIFVD-SNVASVHVSATLVATTR 218
           + T+     ++CA  G   LT    CS    +F        D S VA  ++  T   T+ 
Sbjct: 156 LTTTHTSVPKMCAKIGEYCLTSSECCSKSCLSFAYKCVNRYDLSVVADPNLPVTSTYTSN 215

Query: 219 SRSGVI---FTGNHRCSNQGLVRRHSLRLCS-MTNPSTSSTHLQMNL 347
              G +    TG  +C++ GL   H+   CS     S  ST +++ +
Sbjct: 216 RFGGTVDETSTGTPKCTSNGLYCVHNKDCCSGACYKSVCSTEIRVGV 262


>AY062205-1|AAL58566.1|  154|Anopheles gambiae cytochrome P450
           CYP4C26 protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +1

Query: 517 LPANDTSDIIIFALNFLTPVLSHPET*HSSSF 612
           +PA  T+ I+++ L+  T V S+P+  +  +F
Sbjct: 93  IPAGTTAMIVVYELHRDTSVFSNPDKFNPDNF 124


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 6   RGFIGRRDNPHKSYPILTSSQQTARVCAGT 95
           R  +G RD PH S    ++S ++ R   G+
Sbjct: 476 RTALGNRDEPHSSSGNWSASSESGRTSIGS 505


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 6   RGFIGRRDNPHKSYPILTSSQQTARVCAGT 95
           R  +G RD PH S    ++S ++ R   G+
Sbjct: 477 RTALGNRDEPHSSSGNWSASSESGRTSIGS 506


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 291  RLCSMTNPSTSSTHLQMNLEAWNSLHHRSK 380
            RL    NP T  TH+  + + W+++   +K
Sbjct: 986  RLMDGVNPDTLLTHMLQSQQNWSNVCEAAK 1015


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,898
Number of Sequences: 2352
Number of extensions: 14464
Number of successful extensions: 235
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)