Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060226.seq
         (644 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219383-1|AAF23183.1| 1023|Drosophila melanogaster tiptop prote...    29   7.1  
AE014134-3557|AAF57242.3| 1024|Drosophila melanogaster CG12630-P...    29   7.1  
AY058723-1|AAL13952.1|  858|Drosophila melanogaster LD46494p pro...    28   9.4  
AE014134-751|AAF51002.1|  858|Drosophila melanogaster CG17840-PA...    28   9.4  

>AF219383-1|AAF23183.1| 1023|Drosophila melanogaster tiptop protein
           protein.
          Length = 1023

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = -3

Query: 420 EKS*DPPRRMVFRSLIGDVMSSMPPSSFANVLRKLKGWSLSIASKSGAV 274
           ++S  PP R + RS+  D  S +PP S+   +  +  +  ++A+K+G +
Sbjct: 197 QESVSPPARKIPRSISADYKSPLPPGSW---MPPINPYLAAVAAKTGGL 242


>AE014134-3557|AAF57242.3| 1024|Drosophila melanogaster CG12630-PA
           protein.
          Length = 1024

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = -3

Query: 420 EKS*DPPRRMVFRSLIGDVMSSMPPSSFANVLRKLKGWSLSIASKSGAV 274
           ++S  PP R + RS+  D  S +PP S+   +  +  +  ++A+K+G +
Sbjct: 198 QESVSPPARKIPRSISADYKSPLPPGSW---MPPINPYLAAVAAKTGGL 243


>AY058723-1|AAL13952.1|  858|Drosophila melanogaster LD46494p
           protein.
          Length = 858

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -1

Query: 281 APYQALIGTSMVSRKNDSRTGTSCXDESSRNVDRSHIGVDEDLGRSLES 135
           +P+Q  I TS  +R+N S TG S     + N   S  G D      L +
Sbjct: 671 SPFQRQIQTSRKARQNPSMTGQSSTGSMNSNSSSSSEGDDSSSDEELSA 719


>AE014134-751|AAF51002.1|  858|Drosophila melanogaster CG17840-PA
           protein.
          Length = 858

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -1

Query: 281 APYQALIGTSMVSRKNDSRTGTSCXDESSRNVDRSHIGVDEDLGRSLES 135
           +P+Q  I TS  +R+N S TG S     + N   S  G D      L +
Sbjct: 671 SPFQRQIQTSRKARQNPSMTGQSSTGSMNSNSSSSSEGDDSSSDEELSA 719


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,555,411
Number of Sequences: 53049
Number of extensions: 619417
Number of successful extensions: 1711
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1711
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)