BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV060226.seq (644 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 4.4 EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 7.7 EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 7.7 >AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor protein. Length = 1770 Score = 22.2 bits (45), Expect = 4.4 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -2 Query: 187 WTEATLESTKIWAGAWKVE 131 W+E+ +ES G W+VE Sbjct: 1213 WSESNVESKGRLLGFWRVE 1231 >EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. Length = 684 Score = 21.4 bits (43), Expect = 7.7 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = -3 Query: 342 SFANVLRKLKGWSLSIASKSGAVP 271 S + RK+ G++L ASK VP Sbjct: 380 SIDTLARKILGYNLEAASKYQIVP 403 >EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. Length = 684 Score = 21.4 bits (43), Expect = 7.7 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = -3 Query: 342 SFANVLRKLKGWSLSIASKSGAVP 271 S + RK+ G++L ASK VP Sbjct: 380 SIDTLARKILGYNLEAASKYQIVP 403 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 180,915 Number of Sequences: 438 Number of extensions: 4137 Number of successful extensions: 8 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 19438227 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -