Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060223.seq
(631 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113528-1|AAM29533.1| 396|Drosophila melanogaster RE60671p pro... 34 0.18
AL023874-7|CAA19643.1| 552|Drosophila melanogaster EG:100G10.1 ... 34 0.18
AE014298-449|AAF45812.1| 552|Drosophila melanogaster CG2685-PA ... 34 0.18
BT021407-1|AAX33555.1| 720|Drosophila melanogaster LD06749p pro... 31 1.7
AF162774-1|AAF68853.2| 720|Drosophila melanogaster Nopp140-like... 31 1.7
AE014296-3628|AAF51788.3| 720|Drosophila melanogaster CG7421-PA... 31 1.7
AE014296-3627|AAF51789.2| 686|Drosophila melanogaster CG7421-PB... 31 1.7
AY118901-1|AAM50761.1| 509|Drosophila melanogaster LD10524p pro... 29 6.9
AE013599-3044|AAF57445.1| 726|Drosophila melanogaster CG11180-P... 29 6.9
AY061005-1|AAL28553.1| 527|Drosophila melanogaster HL02088p pro... 28 9.1
AY051948-1|AAK93372.1| 382|Drosophila melanogaster LD42063p pro... 28 9.1
AF536543-1|AAN77184.1| 960|Drosophila melanogaster SR-related C... 28 9.1
AE014298-1163|AAF46360.3| 382|Drosophila melanogaster CG1636-PA... 28 9.1
AE014296-2867|AAX52741.1| 960|Drosophila melanogaster CG33522-P... 28 9.1
>AY113528-1|AAM29533.1| 396|Drosophila melanogaster RE60671p
protein.
Length = 396
Score = 33.9 bits (74), Expect = 0.18
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 288 EEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKSIINNTXNVSSKPAKL 437
EED K K S K+ A +DDE+DD++ N V +KPA +
Sbjct: 306 EEDDGKDIDKIEERTSDSDKRTASSTDDEDDDDQDEDENMPEVPTKPASV 355
>AL023874-7|CAA19643.1| 552|Drosophila melanogaster EG:100G10.1
protein.
Length = 552
Score = 33.9 bits (74), Expect = 0.18
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 288 EEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKSIINNTXNVSSKPAKL 437
EED K K S K+ A +DDE+DD++ N V +KPA +
Sbjct: 306 EEDDGKDIDKIEERTSDSDKRTASSTDDEDDDDQDEDENMPEVPTKPASV 355
>AE014298-449|AAF45812.1| 552|Drosophila melanogaster CG2685-PA
protein.
Length = 552
Score = 33.9 bits (74), Expect = 0.18
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 288 EEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKSIINNTXNVSSKPAKL 437
EED K K S K+ A +DDE+DD++ N V +KPA +
Sbjct: 306 EEDDGKDIDKIEERTSDSDKRTASSTDDEDDDDQDEDENMPEVPTKPASV 355
>BT021407-1|AAX33555.1| 720|Drosophila melanogaster LD06749p
protein.
Length = 720
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKSIINNTXNVSSKPAKLA 440
SD + KPA KS K + SDD D+ + ++ PAK A
Sbjct: 473 SDSSEDEKPAKAAPKALAKSAKAASSDSDDSSDEETPAVKPAVKKTAAPAKKA 525
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKS 392
S EE+V KPAAK + + KKGA SDD ++++
Sbjct: 262 SSEEEV-KPAAKSAAKLAPA-KKGASSSDDSSSEDEA 296
>AF162774-1|AAF68853.2| 720|Drosophila melanogaster Nopp140-like
nucleolar protein protein.
Length = 720
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKSIINNTXNVSSKPAKLA 440
SD + KPA KS K + SDD D+ + ++ PAK A
Sbjct: 473 SDSSEDEKPAKAAPKALAKSAKAASSDSDDSSDEETPAVKPAVKKTAAPAKKA 525
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKS 392
S EE+V KPAAK + + KKGA SDD ++++
Sbjct: 262 SSEEEV-KPAAKSAAKLAPA-KKGASSSDDSSSEDEA 296
>AE014296-3628|AAF51788.3| 720|Drosophila melanogaster CG7421-PA,
isoform A protein.
Length = 720
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKSIINNTXNVSSKPAKLA 440
SD + KPA KS K + SDD D+ + ++ PAK A
Sbjct: 473 SDSSEDEKPAKAAPKALAKSAKAASSDSDDSSDEETPAVKPAVKKTAAPAKKA 525
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKS 392
S EE+V KPAAK + + KKGA SDD ++++
Sbjct: 262 SSEEEV-KPAAKSAAKLAPA-KKGASSSDDSSSEDEA 296
>AE014296-3627|AAF51789.2| 686|Drosophila melanogaster CG7421-PB,
isoform B protein.
Length = 686
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKSIINNTXNVSSKPAKLA 440
SD + KPA KS K + SDD D+ + ++ PAK A
Sbjct: 473 SDSSEDEKPAKAAPKALAKSAKAASSDSDDSSDEETPAVKPAVKKTAAPAKKA 525
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKS 392
S EE+V KPAAK + + KKGA SDD ++++
Sbjct: 262 SSEEEV-KPAAKSAAKLAPA-KKGASSSDDSSSEDEA 296
>AY118901-1|AAM50761.1| 509|Drosophila melanogaster LD10524p
protein.
Length = 509
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 79 SVKKENHNMSKKRGNKKNQDLDDDFDEKPSVMNEK 183
S++ E + KKR + KN+++ +D E+P+ +K
Sbjct: 211 SIQTEESDQKKKRKSDKNKEIAEDSIEEPAAKKKK 245
>AE013599-3044|AAF57445.1| 726|Drosophila melanogaster CG11180-PA
protein.
Length = 726
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 79 SVKKENHNMSKKRGNKKNQDLDDDFDEKPSVMNEK 183
S++ E + KKR + KN+++ +D E+P+ +K
Sbjct: 428 SIQTEESDQKKKRKSDKNKEIAEDSIEEPAAKKKK 462
>AY061005-1|AAL28553.1| 527|Drosophila melanogaster HL02088p
protein.
Length = 527
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKSIINNT 407
S E + P +S G + +KG +RS E DN S NT
Sbjct: 361 SMERSLTPPPMNRSRLGGGNNRKGRNRSPRHERDNNSGSTNT 402
>AY051948-1|AAK93372.1| 382|Drosophila melanogaster LD42063p
protein.
Length = 382
Score = 28.3 bits (60), Expect = 9.1
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -1
Query: 253 RYRYNLQFYSSSCLFLYF 200
R +N+ FY++SCLFL+F
Sbjct: 87 RVIWNIAFYAASCLFLHF 104
>AF536543-1|AAN77184.1| 960|Drosophila melanogaster SR-related CTD
associated factor 6 protein.
Length = 960
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKSIINNT 407
S E + P +S G + +KG +RS E DN S NT
Sbjct: 794 SMERSLTPPPMNRSRLGGGNNRKGRNRSPRHERDNNSGSTNT 835
>AE014298-1163|AAF46360.3| 382|Drosophila melanogaster CG1636-PA
protein.
Length = 382
Score = 28.3 bits (60), Expect = 9.1
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -1
Query: 253 RYRYNLQFYSSSCLFLYF 200
R +N+ FY++SCLFL+F
Sbjct: 87 RVIWNIAFYAASCLFLHF 104
>AE014296-2867|AAX52741.1| 960|Drosophila melanogaster CG33522-PA,
isoform A protein.
Length = 960
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKSIINNT 407
S E + P +S G + +KG +RS E DN S NT
Sbjct: 794 SMERSLTPPPMNRSRLGGGNNRKGRNRSPRHERDNNSGSTNT 835
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,655,491
Number of Sequences: 53049
Number of extensions: 287498
Number of successful extensions: 1505
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1477
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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