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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060223.seq
         (631 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.      35   0.042
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge...    35   0.042
Z81038-14|CAI79153.1|  696|Caenorhabditis elegans Hypothetical p...    31   0.68 
Z81038-13|CAB02755.1|  971|Caenorhabditis elegans Hypothetical p...    31   0.68 
AF067216-1|AAC17524.1|  301|Caenorhabditis elegans Hypothetical ...    31   0.68 
Z93385-5|CAB07639.1|  734|Caenorhabditis elegans Hypothetical pr...    31   0.90 
Z93385-4|CAB07640.1|  806|Caenorhabditis elegans Hypothetical pr...    31   0.90 
X96762-1|CAA65537.1|  806|Caenorhabditis elegans DNA topoisomera...    31   0.90 
AF047663-6|AAC04447.1|  368|Caenorhabditis elegans Hypothetical ...    30   1.6  
U28739-11|AAR25657.1|  487|Caenorhabditis elegans Hypothetical p...    29   2.1  
U28739-10|AAR25656.1|  683|Caenorhabditis elegans Hypothetical p...    29   2.1  
AC024838-6|AAF60823.1|  214|Caenorhabditis elegans Hypothetical ...    29   2.1  
Z77136-8|CAB00885.2|  278|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U61958-3|AAB03180.2|  149|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z49125-2|CAA88935.1|  333|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z35663-11|CAA84732.2|  791|Caenorhabditis elegans Hypothetical p...    28   4.8  
Z81586-9|CAB04699.2|  676|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U53154-10|AAC25849.1|  142|Caenorhabditis elegans Hypothetical p...    28   6.3  
U00057-1|AAA50726.2|  347|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AC024824-1|AAK85503.1|  679|Caenorhabditis elegans Hypothetical ...    28   6.3  
EU068466-1|ABU49431.1|  801|Caenorhabditis elegans PRO-3 protein.      27   8.4  
AM085500-1|CAJ30198.1|  947|Caenorhabditis elegans autophagy pro...    27   8.4  
AL132948-40|CAD31812.3|  801|Caenorhabditis elegans Hypothetical...    27   8.4  
AF106576-1|AAC78177.2|  664|Caenorhabditis elegans Hypothetical ...    27   8.4  
AF101315-4|AAO25988.1|  719|Caenorhabditis elegans Hypothetical ...    27   8.4  
AF101315-3|AAC69227.1|  880|Caenorhabditis elegans Hypothetical ...    27   8.4  

>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
          Length = 1359

 Score = 35.1 bits (77), Expect = 0.042
 Identities = 17/36 (47%), Positives = 24/36 (66%)
 Frame = +3

Query: 285 DEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKS 392
           DEE+ P+ ++KKS    KS  + +D SD+EED  KS
Sbjct: 70  DEEESPRKSSKKSRKRAKSESE-SDESDEEEDRKKS 104


>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
           related protein 1 protein.
          Length = 1359

 Score = 35.1 bits (77), Expect = 0.042
 Identities = 17/36 (47%), Positives = 24/36 (66%)
 Frame = +3

Query: 285 DEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKS 392
           DEE+ P+ ++KKS    KS  + +D SD+EED  KS
Sbjct: 70  DEEESPRKSSKKSRKRAKSESE-SDESDEEEDRKKS 104


>Z81038-14|CAI79153.1|  696|Caenorhabditis elegans Hypothetical
           protein C25A1.10b protein.
          Length = 696

 Score = 31.1 bits (67), Expect = 0.68
 Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
 Frame = +3

Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKS-IINNTXNVSSKPAKLA 440
           SD+E  P  A           KK A  S D  DD K  ++  T NV  K  K A
Sbjct: 408 SDDEKKPTKATPVKVTPKSVTKKAAASSSDSSDDEKKPVVKQTPNVVPKKEKAA 461



 Score = 29.1 bits (62), Expect = 2.7
 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
 Frame = +3

Query: 282 SDEEDVPKPAAKKSXXXGK---SXKKGADRSDDEEDDNKSIINNTXNVSSKPAKLA 440
           SD  D  KPAAK +        + KK A  S D  DD K  +    +  + P   A
Sbjct: 313 SDSSDDEKPAAKSTPAKTTPKPTAKKAASSSSDSSDDEKKPVAKPTSAKATPKPAA 368



 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 291 EDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNK 389
           +D  KP  K++       +K A  SDD  DD K
Sbjct: 440 DDEKKPVVKQTPNVVPKKEKAASSSDDSSDDEK 472


>Z81038-13|CAB02755.1|  971|Caenorhabditis elegans Hypothetical
           protein C25A1.10a protein.
          Length = 971

 Score = 31.1 bits (67), Expect = 0.68
 Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
 Frame = +3

Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKS-IINNTXNVSSKPAKLA 440
           SD+E  P  A           KK A  S D  DD K  ++  T NV  K  K A
Sbjct: 683 SDDEKKPTKATPVKVTPKSVTKKAAASSSDSSDDEKKPVVKQTPNVVPKKEKAA 736



 Score = 29.1 bits (62), Expect = 2.7
 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
 Frame = +3

Query: 282 SDEEDVPKPAAKKSXXXGK---SXKKGADRSDDEEDDNKSIINNTXNVSSKPAKLA 440
           SD  D  KPAAK +        + KK A  S D  DD K  +    +  + P   A
Sbjct: 588 SDSSDDEKPAAKSTPAKTTPKPTAKKAASSSSDSSDDEKKPVAKPTSAKATPKPAA 643



 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 291 EDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNK 389
           +D  KP  K++       +K A  SDD  DD K
Sbjct: 715 DDEKKPVVKQTPNVVPKKEKAASSSDDSSDDEK 747


>AF067216-1|AAC17524.1|  301|Caenorhabditis elegans Hypothetical
           protein C35E7.9 protein.
          Length = 301

 Score = 31.1 bits (67), Expect = 0.68
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 267 KKVPVSDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKS 392
           KK    D++   K   KK        +KG D+ +DE+DD KS
Sbjct: 106 KKEDKKDDKKDDKKEEKKEEKKEDEKEKGDDKKEDEKDDKKS 147



 Score = 27.5 bits (58), Expect = 8.4
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 258 ENIKKVPVSDEEDVPKPAAKKSXXXG--KSXKKGADRSDDEEDDNK 389
           E  +K   S+++D  K  AKK       K  +K  D+ DD++DD K
Sbjct: 74  EKKEKSKKSEKKDDKKEEAKKEDDKKDEKKDEKKEDKKDDKKDDKK 119


>Z93385-5|CAB07639.1|  734|Caenorhabditis elegans Hypothetical
           protein M01E5.5b protein.
          Length = 734

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 258 ENIKKVPV-SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDD 383
           +N KK  V SD ED  KP  KKS    K   + +   DDEE +
Sbjct: 80  KNGKKKDVGSDSEDDYKPEKKKSKKNNKKKAQESSEDDDEESE 122



 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +3

Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKSIINN 404
           SDE+D      K S   GK    G+D  DD + + K    N
Sbjct: 65  SDEDDYKPEKRKSSAKNGKKKDVGSDSEDDYKPEKKKSKKN 105


>Z93385-4|CAB07640.1|  806|Caenorhabditis elegans Hypothetical
           protein M01E5.5a protein.
          Length = 806

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 258 ENIKKVPV-SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDD 383
           +N KK  V SD ED  KP  KKS    K   + +   DDEE +
Sbjct: 80  KNGKKKDVGSDSEDDYKPEKKKSKKNNKKKAQESSEDDDEESE 122



 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +3

Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKSIINN 404
           SDE+D      K S   GK    G+D  DD + + K    N
Sbjct: 65  SDEDDYKPEKRKSSAKNGKKKDVGSDSEDDYKPEKKKSKKN 105


>X96762-1|CAA65537.1|  806|Caenorhabditis elegans DNA topoisomerase
           protein.
          Length = 806

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 258 ENIKKVPV-SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDD 383
           +N KK  V SD ED  KP  KKS    K   + +   DDEE +
Sbjct: 80  KNGKKKDVGSDSEDDYKPEKKKSKKNNKKKAQESSEDDDEESE 122



 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +3

Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKSIINN 404
           SDE+D      K S   GK    G+D  DD + + K    N
Sbjct: 65  SDEDDYKPEKRKSSAKNGKKKDVGSDSEDDYKPEKKKSKKN 105


>AF047663-6|AAC04447.1|  368|Caenorhabditis elegans Hypothetical
           protein W09G12.7 protein.
          Length = 368

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 19/51 (37%), Positives = 23/51 (45%)
 Frame = +3

Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKSIINNTXNVSSKPAK 434
           SD++   K  +KKS   G S    +D SDD  DD K         S KP K
Sbjct: 154 SDDDKKKKKKSKKSKNKGSS-SDSSDSSDDSSDDEKP--KKKKKKSKKPKK 201


>U28739-11|AAR25657.1|  487|Caenorhabditis elegans Hypothetical
           protein C17G10.6b protein.
          Length = 487

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNK 389
           +DE++       K     KS KK   ++DD+EDD+K
Sbjct: 256 TDEDEDEDDDGAKHGKKSKSKKKKGKKNDDDEDDHK 291



 Score = 28.7 bits (61), Expect = 3.6
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 285 DEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDD 383
           DE+D  K    K    GK   K  D  +DE+DD
Sbjct: 286 DEDDHKKGKKGKKGKKGKKKNKDDDEDEDEDDD 318



 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 85  KKENHNMSKKRGNKKNQDLDDDFDE 159
           KK       K+G KKN+D D+D DE
Sbjct: 291 KKGKKGKKGKKGKKKNKDDDEDEDE 315


>U28739-10|AAR25656.1|  683|Caenorhabditis elegans Hypothetical
           protein C17G10.6a protein.
          Length = 683

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNK 389
           +DE++       K     KS KK   ++DD+EDD+K
Sbjct: 307 TDEDEDEDDDGAKHGKKSKSKKKKGKKNDDDEDDHK 342



 Score = 28.7 bits (61), Expect = 3.6
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 285 DEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDD 383
           DE+D  K    K    GK   K  D  +DE+DD
Sbjct: 337 DEDDHKKGKKGKKGKKGKKKNKDDDEDEDEDDD 369



 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 85  KKENHNMSKKRGNKKNQDLDDDFDE 159
           KK       K+G KKN+D D+D DE
Sbjct: 342 KKGKKGKKGKKGKKKNKDDDEDEDE 366


>AC024838-6|AAF60823.1|  214|Caenorhabditis elegans Hypothetical
           protein Y59E9AL.6 protein.
          Length = 214

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +3

Query: 282 SDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKSIINNTXNVSSKPAK 434
           SD++D  K   K+     K  KK  ++ DD++ D+K    +    S+K  K
Sbjct: 125 SDKKDEKKDDKKEKDEEKKDDKKEDEKKDDDKKDDKKEAKSKSKKSNKSKK 175



 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 285 DEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNK 389
           D++   K  +KKS    KS K   ++ DD++D++K
Sbjct: 158 DDKKEAKSKSKKSNKSKKSKKSKREKKDDKKDEDK 192


>Z77136-8|CAB00885.2|  278|Caenorhabditis elegans Hypothetical
           protein ZC376.8 protein.
          Length = 278

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +3

Query: 264 IKKVPVSDEEDVPK-PA-AKKSXXXGKSXKKGADRSDDEEDDNKSIINNTXNVSSKPAK 434
           +KK+    EE  P+ PA +KKS    KS  +G+ + +D+E + +         S  P K
Sbjct: 74  VKKIEEKGEEKKPEEPAKSKKSEKKEKSKNEGSKKEEDKEKEKEKSNKAEDKKSEDPKK 132


>U61958-3|AAB03180.2|  149|Caenorhabditis elegans Hypothetical
           protein C25A8.2 protein.
          Length = 149

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 288 EEDVPKPAAKKSXXXGKSXKKGADRSDDEEDD 383
           +E+ PK  +KKS    KS K   D+ D EE++
Sbjct: 94  KEEKPKEKSKKSAKSKKSSKSKKDKKDGEEEN 125


>Z49125-2|CAA88935.1|  333|Caenorhabditis elegans Hypothetical
           protein C47G2.2 protein.
          Length = 333

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 246 R*RXENIKKVPVSDEEDVP-KPAAKKSXXXGKSXKKGADRSDDEEDDNKS 392
           R R  ++   P  DE+ VP + A K++     +    +D + D++DD+ S
Sbjct: 62  RKRSRSLGDEPTEDEDGVPVRKANKRNHSTSSAADSSSDDAKDDDDDDDS 111


>Z35663-11|CAA84732.2|  791|Caenorhabditis elegans Hypothetical
           protein T04A8.13 protein.
          Length = 791

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = +3

Query: 264 IKKVPVSDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKSIINNTXNVSSKPAK 434
           +KK    D+E+  K   +K     +  + G ++ +D+++D K   N+     SK  K
Sbjct: 60  LKKDEEKDKEEAEKEKNEKEKKEEEKKEDGHEKKEDKKEDKKENENDEKKEKSKDDK 116


>Z81586-9|CAB04699.2|  676|Caenorhabditis elegans Hypothetical
           protein T05F1.11 protein.
          Length = 676

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +2

Query: 176 MKRQN*PLKIKEKARRRIKLEIVAIAXREHKESSSFRRRGRPET 307
           MKR+N   KIK +A  R K E   I  RE K S + ++  + ET
Sbjct: 482 MKRKNEEAKIKLEAEMREKAEQAEIKRREEK-SRALKKLQKEET 524


>U53154-10|AAC25849.1|  142|Caenorhabditis elegans Hypothetical
           protein C33G8.3 protein.
          Length = 142

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = +1

Query: 85  KKENHNMSKKRGNKKNQDLDDDFDEKPSVMNEK 183
           K++    +KK+GNKK++D +++ D+     ++K
Sbjct: 72  KEKREKKNKKKGNKKDEDEEEEEDKDKKKKDKK 104


>U00057-1|AAA50726.2|  347|Caenorhabditis elegans Hypothetical
           protein T24G10.2 protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 279 VSDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDN 386
           V+D+E  PK   K+     +  KK    S D+ED +
Sbjct: 312 VADDEPEPKKPKKEEVEDDEDEKKAGSSSSDDEDSD 347


>AC024824-1|AAK85503.1|  679|Caenorhabditis elegans Hypothetical
           protein Y55B1BR.3 protein.
          Length = 679

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 267 KKVPVSDEEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDN 386
           K+    +EE+V +   KK+    KS KK A + + EE+ +
Sbjct: 392 KESSSDEEEEVEESPKKKTKSPRKSSKKSAAKEESEEESS 431



 Score = 27.5 bits (58), Expect = 8.4
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
 Frame = +3

Query: 285 DEEDVPKPAAKKSXXXGKSXKKGA------DRSDDEEDDNKSIINNTXNVSSKPAK 434
           +EE+V +   KK     KS KK A      + SDDEE++     N +   S   +K
Sbjct: 609 EEEEVEESPKKKGKTPRKSSKKSAAKEESEESSDDEEEEQAEETNGSHTESPTKSK 664


>EU068466-1|ABU49431.1|  801|Caenorhabditis elegans PRO-3 protein.
          Length = 801

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 509 VASDEDVAKPVGKKKTXN*RKIIEAQSSDEDDD 607
           V +D+D  +PV KKK    + +     SD DD+
Sbjct: 560 VDTDDDADEPVAKKKRVEQKSVENDAESDADDE 592


>AM085500-1|CAJ30198.1|  947|Caenorhabditis elegans autophagy
           protein 9 protein.
          Length = 947

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 85  KKENHNMSKKRGNKKNQDLDDDFDEK 162
           +K+ H M   +  +  Q +DDDFD++
Sbjct: 22  QKKTHQMFNSQSKRAYQQIDDDFDDE 47


>AL132948-40|CAD31812.3|  801|Caenorhabditis elegans Hypothetical
           protein Y39B6A.14 protein.
          Length = 801

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 509 VASDEDVAKPVGKKKTXN*RKIIEAQSSDEDDD 607
           V +D+D  +PV KKK    + +     SD DD+
Sbjct: 560 VDTDDDADEPVAKKKRVEQKSVENDAESDADDE 592


>AF106576-1|AAC78177.2|  664|Caenorhabditis elegans Hypothetical
           protein W07E6.1 protein.
          Length = 664

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +3

Query: 288 EEDVPKPAAKKSXXXGKSXKKGADRSDDEEDDNKSIINNTXNVSSKPAK 434
           E++  K A K      K+  + ++ SDDEE+    +     N   KPAK
Sbjct: 521 EKEKEKAAQKSQNKKNKAEAEASESSDDEEEKKNGV---EVNGQKKPAK 566


>AF101315-4|AAO25988.1|  719|Caenorhabditis elegans Hypothetical
           protein T22H9.2b protein.
          Length = 719

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 85  KKENHNMSKKRGNKKNQDLDDDFDEK 162
           +K+ H M   +  +  Q +DDDFD++
Sbjct: 22  QKKTHQMFNSQSKRAYQQIDDDFDDE 47


>AF101315-3|AAC69227.1|  880|Caenorhabditis elegans Hypothetical
           protein T22H9.2a protein.
          Length = 880

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 85  KKENHNMSKKRGNKKNQDLDDDFDEK 162
           +K+ H M   +  +  Q +DDDFD++
Sbjct: 22  QKKTHQMFNSQSKRAYQQIDDDFDDE 47


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,851,011
Number of Sequences: 27780
Number of extensions: 153984
Number of successful extensions: 1025
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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