Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060222.seq
(657 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D64154-1|BAA11023.1| 407|Homo sapiens Mr 110,000 antigen protein. 132 1e-30
BC017245-1|AAH17245.1| 407|Homo sapiens adhesion regulating mol... 132 1e-30
AL354836-4|CAC22308.1| 407|Homo sapiens adhesion regulating mol... 132 1e-30
BC010733-1|AAH10733.1| 296|Homo sapiens Unknown (protein for IM... 44 4e-04
BC021711-1|AAH21711.1| 367|Homo sapiens apolipoprotein B mRNA e... 30 8.3
AL137800-10|CAI19483.1| 367|Homo sapiens apolipoprotein B mRNA ... 30 8.3
AK098557-1|BAC05332.1| 367|Homo sapiens protein ( Homo sapiens ... 30 8.3
>D64154-1|BAA11023.1| 407|Homo sapiens Mr 110,000 antigen protein.
Length = 407
Score = 132 bits (318), Expect = 1e-30
Identities = 55/99 (55%), Positives = 70/99 (70%)
Frame = +2
Query: 215 TSRQKEGALVCLPREDSLMHFCWKDRTTGEVEDDLLIFPDDCEFTRVNECTTGRVYVXXX 394
T +++G + +DSL+HFCWKDRT+G VEDDL+IFPDDCEF RV +C +GRVYV
Sbjct: 39 TPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEFKRVPQCPSGRVYVLKF 98
Query: 395 XXXXXXXXXWMQEPKADKDEEYCRRINEALNNPPTSGGV 511
WMQEPK D+DEE+CR++NE LNNPP G +
Sbjct: 99 KAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNPPMPGAL 137
Score = 53.6 bits (123), Expect = 6e-07
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = +3
Query: 159 NKHIVEFRAGRMTLKGRMVHPDKRKGLLYVYQEKILSCTFVGKTELRGRLRMTCLYF 329
NK++VEFRAG+M+LKG V PDKRKGL+Y+ Q F K G + + F
Sbjct: 20 NKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIF 76
>BC017245-1|AAH17245.1| 407|Homo sapiens adhesion regulating
molecule 1 protein.
Length = 407
Score = 132 bits (318), Expect = 1e-30
Identities = 55/99 (55%), Positives = 70/99 (70%)
Frame = +2
Query: 215 TSRQKEGALVCLPREDSLMHFCWKDRTTGEVEDDLLIFPDDCEFTRVNECTTGRVYVXXX 394
T +++G + +DSL+HFCWKDRT+G VEDDL+IFPDDCEF RV +C +GRVYV
Sbjct: 39 TPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEFKRVPQCPSGRVYVLKF 98
Query: 395 XXXXXXXXXWMQEPKADKDEEYCRRINEALNNPPTSGGV 511
WMQEPK D+DEE+CR++NE LNNPP G +
Sbjct: 99 KAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNPPMPGAL 137
Score = 53.6 bits (123), Expect = 6e-07
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = +3
Query: 159 NKHIVEFRAGRMTLKGRMVHPDKRKGLLYVYQEKILSCTFVGKTELRGRLRMTCLYF 329
NK++VEFRAG+M+LKG V PDKRKGL+Y+ Q F K G + + F
Sbjct: 20 NKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIF 76
>AL354836-4|CAC22308.1| 407|Homo sapiens adhesion regulating
molecule 1 protein.
Length = 407
Score = 132 bits (318), Expect = 1e-30
Identities = 55/99 (55%), Positives = 70/99 (70%)
Frame = +2
Query: 215 TSRQKEGALVCLPREDSLMHFCWKDRTTGEVEDDLLIFPDDCEFTRVNECTTGRVYVXXX 394
T +++G + +DSL+HFCWKDRT+G VEDDL+IFPDDCEF RV +C +GRVYV
Sbjct: 39 TPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEFKRVPQCPSGRVYVLKF 98
Query: 395 XXXXXXXXXWMQEPKADKDEEYCRRINEALNNPPTSGGV 511
WMQEPK D+DEE+CR++NE LNNPP G +
Sbjct: 99 KAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNPPMPGAL 137
Score = 53.6 bits (123), Expect = 6e-07
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = +3
Query: 159 NKHIVEFRAGRMTLKGRMVHPDKRKGLLYVYQEKILSCTFVGKTELRGRLRMTCLYF 329
NK++VEFRAG+M+LKG V PDKRKGL+Y+ Q F K G + + F
Sbjct: 20 NKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIF 76
>BC010733-1|AAH10733.1| 296|Homo sapiens Unknown (protein for
IMAGE:3897044) protein.
Length = 296
Score = 44.4 bits (100), Expect = 4e-04
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +2
Query: 434 PKADKDEEYCRRINEALNNPPTSGGV 511
PK D+DEE+CR++NE LNNPP G +
Sbjct: 1 PKTDQDEEHCRKVNEYLNNPPMPGAL 26
>BC021711-1|AAH21711.1| 367|Homo sapiens apolipoprotein B mRNA
editing enzyme, catalytic polypeptide-like 4 (putative)
protein.
Length = 367
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 225 CLDVPYDLSTSYDQHEILLCVCFLLNFPQDQTYCQTVQ*TFY 100
C + PY + T + L C + FP T+ QT TFY
Sbjct: 28 CSNCPYHIRTGEEARVSLTEFCQIFGFPYGTTFPQTKHLTFY 69
>AL137800-10|CAI19483.1| 367|Homo sapiens apolipoprotein B mRNA
editing enzyme, catalytic polypeptide-like 4 (putative)
protein.
Length = 367
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 225 CLDVPYDLSTSYDQHEILLCVCFLLNFPQDQTYCQTVQ*TFY 100
C + PY + T + L C + FP T+ QT TFY
Sbjct: 28 CSNCPYHIRTGEEARVSLTEFCQIFGFPYGTTFPQTKHLTFY 69
>AK098557-1|BAC05332.1| 367|Homo sapiens protein ( Homo sapiens
cDNA FLJ25691 fis, clone TST04456. ).
Length = 367
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 225 CLDVPYDLSTSYDQHEILLCVCFLLNFPQDQTYCQTVQ*TFY 100
C + PY + T + L C + FP T+ QT TFY
Sbjct: 28 CSNCPYHIRTGEEARVSLTEFCQIFGFPYGTTFPQTKHLTFY 69
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,276,864
Number of Sequences: 237096
Number of extensions: 1896323
Number of successful extensions: 7081
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7081
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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