Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060218.seq
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.0  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.1  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +1

Query: 391 HITNYVCLAISFHDNLES*SIFLFGIINTD 480
           HIT     A  +H+N E    FL  I+  D
Sbjct: 559 HITRIYACATMWHENKEEMMEFLKSILRLD 588


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +1

Query: 391 HITNYVCLAISFHDNLES*SIFLFGIINTD 480
           HIT     A  +H+N E    FL  I+  D
Sbjct: 559 HITRIYACATMWHENKEEMMEFLKSILRLD 588


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +1

Query: 391 HITNYVCLAISFHDNLES*SIFLFGIINTD 480
           HIT     A  +H+N E    FL  I+  D
Sbjct: 559 HITRIYACATMWHENKEEMMEFLKSILRLD 588


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +1

Query: 391 HITNYVCLAISFHDNLES*SIFLFGIINTD 480
           HIT     A  +H+N E    FL  I+  D
Sbjct: 559 HITRIYACATMWHENKEEMMEFLKSILRLD 588


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = -2

Query: 264 NCN*HLARLTIRTYSLIRLIFNMLTETYKLTMY--ALIDL 151
           N N H+A+ T++T +   +   +   T K T+Y  +++D+
Sbjct: 174 NVNAHVAQFTLKTIAETAMGTKLRFTTRKETIYKQSIVDM 213


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/41 (21%), Positives = 22/41 (53%)
 Frame = -2

Query: 450 ALTFKIIMERYSQAYIISYVIYEAISAFLCEYVIDTINYYL 328
           AL+  +++  YS+++  + +  + +  F  E  +   NYY+
Sbjct: 42  ALSIGVVVSIYSKSFHRNEIHIKIVLMFFKEASLYCFNYYV 82


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = -2

Query: 264 NCN*HLARLTIRTYSLIRLIFNMLTETYKLTMY--ALIDL 151
           N N H+A+ T++T +   +   +   T K T+Y  +++D+
Sbjct: 174 NVNAHVAQFTLKTIAETAMGTKLRFTTRKETIYKQSIVDM 213


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,968
Number of Sequences: 336
Number of extensions: 3527
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)