Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060218.seq
         (670 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265578-1|AAG41362.1|  736|Homo sapiens orphan neurotransmitter...    31   2.8  
AF151977-1|AAD38044.1|  737|Homo sapiens orphan neurotransmitter...    31   2.8  

>AF265578-1|AAG41362.1|  736|Homo sapiens orphan neurotransmitter
           transporter NTT5 protein.
          Length = 736

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -1

Query: 607 ILIIYTIHNTLHMCMPKVTYIIFHTSTSKRTL 512
           +L+I  +   +H+CM  +TY+ + +STSK  L
Sbjct: 621 VLLIIFVTMMVHLCMKPITYMSWDSSTSKEVL 652


>AF151977-1|AAD38044.1|  737|Homo sapiens orphan neurotransmitter
           transporter NTT5 protein.
          Length = 737

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -1

Query: 607 ILIIYTIHNTLHMCMPKVTYIIFHTSTSKRTL 512
           +L+I  +   +H+CM  +TY+ + +STSK  L
Sbjct: 622 VLLIIFVTMMVHLCMKPITYMSWDSSTSKEVL 653


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,988,656
Number of Sequences: 237096
Number of extensions: 1825026
Number of successful extensions: 2263
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2261
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)