Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060217.seq
         (605 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O75477 Cluster: Erlin-1 precursor; n=55; Eukaryota|Rep:...   110   3e-23
UniRef50_Q4RQD9 Cluster: Chromosome 17 SCAF15006, whole genome s...   104   2e-21
UniRef50_Q9ZQ87 Cluster: Expressed protein; n=7; Magnoliophyta|R...    79   6e-14
UniRef50_Q70AI7 Cluster: Putative integral membrane protein that...    78   1e-13
UniRef50_UPI0000E4680B Cluster: PREDICTED: hypothetical protein;...    59   9e-08
UniRef50_Q4TIJ0 Cluster: Chromosome undetermined SCAF2082, whole...    37   0.32 
UniRef50_UPI00015B4E99 Cluster: PREDICTED: similar to disulfide ...    35   1.3  
UniRef50_Q9KIU5 Cluster: Protein phosphatase 1; n=3; Myxococcale...    34   3.0  
UniRef50_UPI0000DB71E8 Cluster: PREDICTED: similar to CG4199-PD,...    33   4.0  
UniRef50_Q5V5G6 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_A0LTC1 Cluster: Inner-membrane translocator precursor; ...    32   9.2  
UniRef50_Q586Y5 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  

>UniRef50_O75477 Cluster: Erlin-1 precursor; n=55; Eukaryota|Rep:
           Erlin-1 precursor - Homo sapiens (Human)
          Length = 346

 Score =  110 bits (264), Expect = 3e-23
 Identities = 58/136 (42%), Positives = 78/136 (57%)
 Frame = +3

Query: 102 MADQSSILAIVILAVGVTVHFSLHKVEEGHVGVYYRGGALLPVTSQAGFHM*YHF*HXTX 281
           M     ++A V+  V V ++ S+HK+EEGH+ VYYRGGALL   S  G+H+   F     
Sbjct: 1   MTQARVLVAAVVGLVAVLLYASIHKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFR 60

Query: 282 PFXQLYKLMKLKMCLVAQVVGC*FILKESR*SITLDPQSVLDMVRXFTAEYDRTLIFNKV 461
                 +  ++K        G    +        L P +V D+VR +TA+YD+TLIFNK+
Sbjct: 61  SVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNKI 120

Query: 462 HHELNQFCSAHTLHEV 509
           HHELNQFCSAHTL EV
Sbjct: 121 HHELNQFCSAHTLQEV 136



 Score = 96.7 bits (230), Expect = 4e-19
 Identities = 56/132 (42%), Positives = 73/132 (55%)
 Frame = +2

Query: 209 GWSFITSYKSSWFSHVIPLLTXYXAIXTTLQTDEVKNVPCGTSGGVLIYFERIEVVNNAG 388
           G + +TS     +  ++P +T + ++ TTLQTDEVKNVPCGTSGGV+IY +RIEVVN   
Sbjct: 37  GGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLA 96

Query: 389 PTKRTRYGAXLHS*I*QDSYFQ*SAP*TESIL*CPYLARGYIDLXDQIXENLRTALXKDL 568
           P           +   +   F               L   YI+L DQI ENL+ AL KDL
Sbjct: 97  PYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDL 156

Query: 569 HEMAPXLRVQAV 604
           + MAP L +QAV
Sbjct: 157 NLMAPGLTIQAV 168


>UniRef50_Q4RQD9 Cluster: Chromosome 17 SCAF15006, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 17 SCAF15006, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 321

 Score =  104 bits (249), Expect = 2e-21
 Identities = 57/152 (37%), Positives = 82/152 (53%), Gaps = 2/152 (1%)
 Frame = +3

Query: 99  TMADQSSILAIVILAVGVTVHFSLHKVEEGHVGVYYRGGALLPVTSQAGFHM*YHF*HXT 278
           TM    ++ A +   + + +H S+HK+EEGH+ VYYRGGALL   +  G+H+   F    
Sbjct: 2   TMPHIWAVFAALSGIMAIMLHSSIHKIEEGHLAVYYRGGALLTTPNGPGYHIMLPFITTY 61

Query: 279 XPFXQLYKLMKLKMCLVAQVVGC*FILKESR*SITLDPQSVLDMVRXFTAEYDRTLIFNK 458
                  +  ++K        G             L P +V+++V+ +TA+YD+TLIFNK
Sbjct: 62  RSVQTTLQTDEIKNVPCGTSGGVMIYFDRIEVVNMLVPSAVVEIVKNYTADYDKTLIFNK 121

Query: 459 VHHELNQFCSAHTLHEV--TLIXLIKSXRIYG 548
           +HHELNQFCS HTL EV   L  +I     YG
Sbjct: 122 IHHELNQFCSVHTLQEVYIELFDIIDGELEYG 153



 Score = 77.4 bits (182), Expect = 2e-13
 Identities = 33/62 (53%), Positives = 46/62 (74%)
 Frame = +2

Query: 209 GWSFITSYKSSWFSHVIPLLTXYXAIXTTLQTDEVKNVPCGTSGGVLIYFERIEVVNNAG 388
           G + +T+     +  ++P +T Y ++ TTLQTDE+KNVPCGTSGGV+IYF+RIEVVN   
Sbjct: 39  GGALLTTPNGPGYHIMLPFITTYRSVQTTLQTDEIKNVPCGTSGGVMIYFDRIEVVNMLV 98

Query: 389 PT 394
           P+
Sbjct: 99  PS 100


>UniRef50_Q9ZQ87 Cluster: Expressed protein; n=7; Magnoliophyta|Rep:
           Expressed protein - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 356

 Score = 79.4 bits (187), Expect = 6e-14
 Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
 Frame = +3

Query: 108 DQSSILAI--VILAVGVTVHFS---LHKVEEGHVGVYYRGGALLPVTSQAGFHM*YHF*H 272
           D SSIL    V  A+   V F    +H+V EGHVG Y+RGGALL + ++ GFH+   F  
Sbjct: 22  DISSILIAFGVFAAIAALVMFPSSLVHQVPEGHVGAYWRGGALLNIITEPGFHLKLPFIT 81

Query: 273 XTXPFXQLYKLMKLKMCLVAQVVGC*FILKESR*SITLDPQSVLDMVRXFTAEYDRTLIF 452
              P     +  +++        G     ++      L    V D +  +   YD T I+
Sbjct: 82  NYEPVQVTLQTDQVRDIPCGTKGGVLITFEKIEVVNRLRKDFVYDTLLNYGVNYDNTWIY 141

Query: 453 NKVHHELNQFCSAHTLHEV 509
           +K+HHE+NQFCS+H+L +V
Sbjct: 142 DKIHHEINQFCSSHSLQQV 160



 Score = 73.3 bits (172), Expect = 4e-12
 Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
 Frame = +2

Query: 257 IPLLTXYXAIXTTLQTDEVKNVPCGTSGGVLIYFERIEVVNNAGPTKRTRYGAXLHS*I* 436
           +P +T Y  +  TLQTD+V+++PCGT GGVLI FE+IEVVN     K   Y   L+  + 
Sbjct: 77  LPFITNYEPVQVTLQTDQVRDIPCGTKGGVLITFEKIEVVNRL--RKDFVYDTLLNYGVN 134

Query: 437 QDSYFQ*SAP*TESIL*CP--YLARGYIDLXDQIXENLRTALXKDLHEMAPXLRVQAV 604
            D+ +       E    C    L + YID+ DQI E ++ AL  D    AP + + +V
Sbjct: 135 YDNTWIYDKIHHEINQFCSSHSLQQVYIDIFDQIDERMKDALQADCTRYAPGIEILSV 192


>UniRef50_Q70AI7 Cluster: Putative integral membrane protein that
           regulates cation conductance; n=1; Triticum
           aestivum|Rep: Putative integral membrane protein that
           regulates cation conductance - Triticum aestivum (Wheat)
          Length = 215

 Score = 78.2 bits (184), Expect = 1e-13
 Identities = 41/114 (35%), Positives = 61/114 (53%)
 Frame = +3

Query: 168 LHKVEEGHVGVYYRGGALLPVTSQAGFHM*YHF*HXTXPFXQLYKLMKLKMCLVAQVVGC 347
           LH+V EGHVGVY+RGGALL   +  G+H+   F     P     +  ++K        G 
Sbjct: 8   LHQVPEGHVGVYWRGGALLKTITTPGYHLKLPFITQFEPIQVTLQTDQVKGIPCGTKGGV 67

Query: 348 *FILKESR*SITLDPQSVLDMVRXFTAEYDRTLIFNKVHHELNQFCSAHTLHEV 509
                +      L+   V + +  +   YD+T I++K+HHE+NQFCSAH+L +V
Sbjct: 68  MISFDKIGVVNRLNKDFVYETLLNYGVHYDKTWIYDKIHHEINQFCSAHSLQQV 121



 Score = 56.8 bits (131), Expect = 4e-07
 Identities = 23/41 (56%), Positives = 31/41 (75%)
 Frame = +2

Query: 257 IPLLTXYXAIXTTLQTDEVKNVPCGTSGGVLIYFERIEVVN 379
           +P +T +  I  TLQTD+VK +PCGT GGV+I F++I VVN
Sbjct: 38  LPFITQFEPIQVTLQTDQVKGIPCGTKGGVMISFDKIGVVN 78


>UniRef50_UPI0000E4680B Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 245

 Score = 58.8 bits (136), Expect = 9e-08
 Identities = 26/51 (50%), Positives = 35/51 (68%)
 Frame = +3

Query: 102 MADQSSILAIVILAVGVTVHFSLHKVEEGHVGVYYRGGALLPVTSQAGFHM 254
           MA+    LA+ I       +F++H+++EGHVGVYYRGGALL  TS  GFH+
Sbjct: 1   MANPLPALALAIGISAFLFNFAIHRIDEGHVGVYYRGGALLQTTSGPGFHV 51


>UniRef50_Q4TIJ0 Cluster: Chromosome undetermined SCAF2082, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF2082,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 243

 Score = 37.1 bits (82), Expect = 0.32
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = +2

Query: 509 YIDLXDQIXENLRTALXKDLHEMAPXLRVQ 598
           ++ L D I ENL+TAL KDL+ MAP L +Q
Sbjct: 1   FLALADIIDENLKTALQKDLNAMAPGLTIQ 30


>UniRef50_UPI00015B4E99 Cluster: PREDICTED: similar to disulfide
           oxidoreductase; n=1; Nasonia vitripennis|Rep: PREDICTED:
           similar to disulfide oxidoreductase - Nasonia
           vitripennis
          Length = 597

 Score = 35.1 bits (77), Expect = 1.3
 Identities = 17/46 (36%), Positives = 28/46 (60%)
 Frame = +2

Query: 290 TTLQTDEVKNVPCGTSGGVLIYFERIEVVNNAGPTKRTRYGAXLHS 427
           T +Q +E+K +P G  GG ++  ++   ++  G TK T YGA LH+
Sbjct: 62  TDIQENEMKTLPLGEEGGKILLIKQKGELHAIG-TKCTHYGALLHT 106


>UniRef50_Q9KIU5 Cluster: Protein phosphatase 1; n=3;
           Myxococcales|Rep: Protein phosphatase 1 - Myxococcus
           xanthus
          Length = 254

 Score = 33.9 bits (74), Expect = 3.0
 Identities = 19/32 (59%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
 Frame = +3

Query: 150 VTVHFSLHKVEEGHVG----VYYRGGALLPVT 233
           VTVHFS   V  GHVG     Y+RGGAL  VT
Sbjct: 113 VTVHFSQSAVYVGHVGDSRVYYFRGGALKQVT 144


>UniRef50_UPI0000DB71E8 Cluster: PREDICTED: similar to CG4199-PD,
           isoform D; n=2; Apocrita|Rep: PREDICTED: similar to
           CG4199-PD, isoform D - Apis mellifera
          Length = 578

 Score = 33.5 bits (73), Expect = 4.0
 Identities = 16/46 (34%), Positives = 29/46 (63%)
 Frame = +2

Query: 290 TTLQTDEVKNVPCGTSGGVLIYFERIEVVNNAGPTKRTRYGAXLHS 427
           T ++ +E+K +P G +GG ++  ++   ++  G TK T YGA LH+
Sbjct: 41  TDIRENEMKLLPLGQNGGKILLIKQKGQIHAIG-TKCTHYGALLHT 85


>UniRef50_Q5V5G6 Cluster: Putative uncharacterized protein; n=1;
           Haloarcula marismortui|Rep: Putative uncharacterized
           protein - Haloarcula marismortui (Halobacterium
           marismortui)
          Length = 323

 Score = 33.5 bits (73), Expect = 4.0
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +3

Query: 117 SILAIVILAVGVTVHFSLHKVEEGHVGVYYRGGALLPVTSQAGFHM 254
           ++  +V LAV   +    H+V EGHVGV    GA+     Q G H+
Sbjct: 26  AVSVVVALAVATALFGGYHQVPEGHVGVQKSFGAVTGDQLQPGAHI 71


>UniRef50_A0LTC1 Cluster: Inner-membrane translocator precursor;
           n=1; Acidothermus cellulolyticus 11B|Rep: Inner-membrane
           translocator precursor - Acidothermus cellulolyticus
           (strain ATCC 43068 / 11B)
          Length = 338

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +3

Query: 99  TMADQSSILAIVILAVGVTVHFSLHKVEEGHVGVYYRGGALLPVTSQAGFH 251
           T AD  +I+ I +L V  T+ F+LH V EG  G+        P T +  F+
Sbjct: 110 TRADVFAIVTITLLFVVQTLAFNLHSVTEGSQGIGIHPPPFDPATYERPFY 160


>UniRef50_Q586Y5 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 761

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 444 LIFNKVHHELNQFCSAHTLHEVTLIXLIKSXRIYGQH 554
           L+FN +HHE N+ C+A       L  ++K    YG H
Sbjct: 336 LVFNDLHHEENKLCNAEGRCPCLLTDVLKYVVTYGLH 372


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,569,559
Number of Sequences: 1657284
Number of extensions: 9595117
Number of successful extensions: 17672
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17659
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)