Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060217.seq
         (605 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   1.9  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   3.3  
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    23   7.7  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   7.7  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +2

Query: 275 YXAIXTTLQTDEVKNVPCGTSGGVLIYFERIEVV--NNAGPTKRT 403
           + AI T LQ   +K VP G    V  YFE  E+V   + GP  R+
Sbjct: 647 WQAIATALQ---MKGVPAGLQRIVRSYFENRELVFETSDGPVTRS 688


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 168  LHKVEEGHVGVYYR 209
            LH++E+G VG+Y R
Sbjct: 1052 LHQLEDGEVGIYRR 1065


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 200 LLSGWSFITSYKSSWFS 250
           LL GWS +T+ K  W S
Sbjct: 10  LLLGWSTVTAQKDWWES 26


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = +1

Query: 328  WHKWWGVDLF*KNRGSQ*RWTHK 396
            W + W  D   ++     RWTH+
Sbjct: 937  WQEEWDADALQQDASRHTRWTHR 959


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,614
Number of Sequences: 2352
Number of extensions: 10960
Number of successful extensions: 266
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)