Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060217.seq
         (605 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g03510.1 68415.m00311 band 7 family protein contains Pfam pro...    79   2e-15
At1g61480.1 68414.m06927 S-locus protein kinase, putative simila...    32   0.26 
At1g61490.1 68414.m06928 S-locus protein kinase, putative simila...    29   1.8  
At1g61440.1 68414.m06923 S-locus protein kinase, putative contai...    29   2.4  
At1g13600.1 68414.m01595 bZIP transcription factor family protei...    29   3.2  
At1g61380.1 68414.m06917 S-locus protein kinase, putative simila...    27   9.6  

>At2g03510.1 68415.m00311 band 7 family protein contains Pfam
           profile PF01145: SPFH domain / Band 7 family
          Length = 356

 Score = 79.4 bits (187), Expect = 2e-15
 Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
 Frame = +3

Query: 108 DQSSILAI--VILAVGVTVHFS---LHKVEEGHVGVYYRGGALLPVTSQAGFHM*YHF*H 272
           D SSIL    V  A+   V F    +H+V EGHVG Y+RGGALL + ++ GFH+   F  
Sbjct: 22  DISSILIAFGVFAAIAALVMFPSSLVHQVPEGHVGAYWRGGALLNIITEPGFHLKLPFIT 81

Query: 273 XTXPFXQLYKLMKLKMCLVAQVVGC*FILKESR*SITLDPQSVLDMVRXFTAEYDRTLIF 452
              P     +  +++        G     ++      L    V D +  +   YD T I+
Sbjct: 82  NYEPVQVTLQTDQVRDIPCGTKGGVLITFEKIEVVNRLRKDFVYDTLLNYGVNYDNTWIY 141

Query: 453 NKVHHELNQFCSAHTLHEV 509
           +K+HHE+NQFCS+H+L +V
Sbjct: 142 DKIHHEINQFCSSHSLQQV 160



 Score = 73.3 bits (172), Expect = 1e-13
 Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
 Frame = +2

Query: 257 IPLLTXYXAIXTTLQTDEVKNVPCGTSGGVLIYFERIEVVNNAGPTKRTRYGAXLHS*I* 436
           +P +T Y  +  TLQTD+V+++PCGT GGVLI FE+IEVVN     K   Y   L+  + 
Sbjct: 77  LPFITNYEPVQVTLQTDQVRDIPCGTKGGVLITFEKIEVVNRL--RKDFVYDTLLNYGVN 134

Query: 437 QDSYFQ*SAP*TESIL*CP--YLARGYIDLXDQIXENLRTALXKDLHEMAPXLRVQAV 604
            D+ +       E    C    L + YID+ DQI E ++ AL  D    AP + + +V
Sbjct: 135 YDNTWIYDKIHHEINQFCSSHSLQQVYIDIFDQIDERMKDALQADCTRYAPGIEILSV 192


>At1g61480.1 68414.m06927 S-locus protein kinase, putative similar
           to receptor protein kinase (IRK1) GI:836953 from
           [Ipomoea trifida]; contains S-locus glycoprotein family
           domain, Pfam:PF00954
          Length = 809

 Score = 32.3 bits (70), Expect = 0.26
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +2

Query: 230 YKSSWFSHVIPLLTXYXAIXTTLQTDEVKNVPCGTSGGVLIYFERIEVVNNAGPT 394
           Y   WF  +IP +  + A      TD   N+   ++G +L++ E   VV + G T
Sbjct: 59  YVGIWFKGIIPRVVVWVANREKPVTDSAANLTISSNGSLLLFNENHSVVWSIGET 113


>At1g61490.1 68414.m06928 S-locus protein kinase, putative similar
           to KI domain interacting kinase 1 [Zea mays]
           gi|2735017|gb|AAB93834; contains S-locus glycoprotein
           family domain, Pfam:PF00954
          Length = 804

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +2

Query: 230 YKSSWFSHVIPLLTXYXAIXTTLQTDEVKNVPCGTSGGVLIYFERIEVVNNAG 388
           Y   WF  +IP +  + A   T  TD   N+   ++G +L++  +  VV + G
Sbjct: 59  YVGIWFKGIIPRVVVWVANRETPTTDTSANLAISSNGSLLLFNGKHGVVWSIG 111


>At1g61440.1 68414.m06923 S-locus protein kinase, putative contains
           similarity to receptor protein kinase [Ipomoea trifida]
           gi|836954|gb|AAC23542; contains S-locus glycoprotein
           family domain, Pfam:PF00954
          Length = 792

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = +2

Query: 230 YKSSWFSHVIPLLTXYXAIXTTLQTDEVKNVPCGTSGGVLIYFERIEVVNNAG 388
           Y   WF  +IP +  + A      TD   N+   +SG +L+   + +VV + G
Sbjct: 52  YVGIWFKGIIPRVVVWVANREKPVTDSAANLVISSSGSLLLINGKHDVVWSTG 104


>At1g13600.1 68414.m01595 bZIP transcription factor family protein
           contains Pfam profile: PF00170 bZIP transcription factor
          Length = 196

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 209 PIINTNMSFFYFMKGKMNRDPYSQNHNGQN 120
           P   T+ S FY + G +N + YS + NGQ+
Sbjct: 35  PSSPTSCSSFYHLNGLINNNNYSSSSNGQD 64


>At1g61380.1 68414.m06917 S-locus protein kinase, putative similar
           to KI domain interacting kinase 1 [Zea mays]
           gi|2735017|gb|AAB93834; contains S-locus glycoprotein
           family domain, Pfam:PF00954
          Length = 805

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 11/53 (20%), Positives = 25/53 (47%)
 Frame = +2

Query: 230 YKSSWFSHVIPLLTXYXAIXTTLQTDEVKNVPCGTSGGVLIYFERIEVVNNAG 388
           Y   WF  ++P +  + A   T  T    N+   ++G +++   + +V+ + G
Sbjct: 56  YVGIWFKKIVPRVVVWVANRDTPVTSSAANLTISSNGSLILLDGKQDVIWSTG 108


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,470,700
Number of Sequences: 28952
Number of extensions: 215630
Number of successful extensions: 358
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1206913392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)