Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060216.seq
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic anhy...    23   6.6  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   6.6  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   8.7  

>EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic
           anhydrase protein.
          Length = 255

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 631 SCQAAAMNVGCTVXSI 584
           SC+ AA+ +GC V +I
Sbjct: 79  SCEPAALELGCVVNNI 94


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +2

Query: 107 LLPGTTPANVK 139
           L+PGTTP NVK
Sbjct: 665 LVPGTTPDNVK 675


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 650 CGPPTDVLPSGRDERGVHG 594
           CG P  +L SG    G HG
Sbjct: 369 CGAPPALLGSGEGGSGTHG 387


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,018
Number of Sequences: 2352
Number of extensions: 10972
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)