BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060216.seq
(668 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D00726-1|BAA00628.1| 423|Homo sapiens ferrochelatase precursor ... 92 2e-18
BX571744-1|CAE11869.1| 416|Homo sapiens hypothetical protein pr... 92 2e-18
BT019959-1|AAV38762.1| 422|Homo sapiens ferrochelatase (protopo... 92 2e-18
BT019958-1|AAV38761.1| 423|Homo sapiens ferrochelatase (protopo... 92 2e-18
BC039841-1|AAH39841.2| 423|Homo sapiens ferrochelatase (protopo... 92 2e-18
AK223190-1|BAD96910.1| 420|Homo sapiens Hypothetical protein DK... 92 2e-18
AK092416-1|BAC03882.1| 429|Homo sapiens protein ( Homo sapiens ... 92 2e-18
AJ250235-1|CAB65962.1| 423|Homo sapiens ferrochelatase protein. 92 2e-18
>D00726-1|BAA00628.1| 423|Homo sapiens ferrochelatase precursor
protein.
Length = 423
Score = 91.9 bits (218), Expect = 2e-18
Identities = 39/70 (55%), Positives = 52/70 (74%)
Frame = +3
Query: 300 DTYPHEVAGTVSRTMEELXGRNPHRLVWQSKVGPLPWLQPYTDDAIKLYAKQGVKHLILX 479
D YP EV+ TV + ME L NP+RLVWQSKVGP+PWL P TD++IK ++G K+++L
Sbjct: 274 DPYPQEVSATVQKVMERLEYCNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLV 333
Query: 480 PVAFVNXHIE 509
P+AF + HIE
Sbjct: 334 PIAFTSDHIE 343
>BX571744-1|CAE11869.1| 416|Homo sapiens hypothetical protein
protein.
Length = 416
Score = 91.9 bits (218), Expect = 2e-18
Identities = 39/70 (55%), Positives = 52/70 (74%)
Frame = +3
Query: 300 DTYPHEVAGTVSRTMEELXGRNPHRLVWQSKVGPLPWLQPYTDDAIKLYAKQGVKHLILX 479
D YP EV+ TV + ME L NP+RLVWQSKVGP+PWL P TD++IK ++G K+++L
Sbjct: 267 DPYPQEVSATVQKVMERLEYCNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLV 326
Query: 480 PVAFVNXHIE 509
P+AF + HIE
Sbjct: 327 PIAFTSDHIE 336
>BT019959-1|AAV38762.1| 422|Homo sapiens ferrochelatase
(protoporphyria) protein.
Length = 422
Score = 91.9 bits (218), Expect = 2e-18
Identities = 39/70 (55%), Positives = 52/70 (74%)
Frame = +3
Query: 300 DTYPHEVAGTVSRTMEELXGRNPHRLVWQSKVGPLPWLQPYTDDAIKLYAKQGVKHLILX 479
D YP EV+ TV + ME L NP+RLVWQSKVGP+PWL P TD++IK ++G K+++L
Sbjct: 273 DPYPQEVSATVQKVMERLEYCNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLV 332
Query: 480 PVAFVNXHIE 509
P+AF + HIE
Sbjct: 333 PIAFTSDHIE 342
>BT019958-1|AAV38761.1| 423|Homo sapiens ferrochelatase
(protoporphyria) protein.
Length = 423
Score = 91.9 bits (218), Expect = 2e-18
Identities = 39/70 (55%), Positives = 52/70 (74%)
Frame = +3
Query: 300 DTYPHEVAGTVSRTMEELXGRNPHRLVWQSKVGPLPWLQPYTDDAIKLYAKQGVKHLILX 479
D YP EV+ TV + ME L NP+RLVWQSKVGP+PWL P TD++IK ++G K+++L
Sbjct: 274 DPYPQEVSATVQKVMERLEYCNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLV 333
Query: 480 PVAFVNXHIE 509
P+AF + HIE
Sbjct: 334 PIAFTSDHIE 343
>BC039841-1|AAH39841.2| 423|Homo sapiens ferrochelatase
(protoporphyria) protein.
Length = 423
Score = 91.9 bits (218), Expect = 2e-18
Identities = 39/70 (55%), Positives = 52/70 (74%)
Frame = +3
Query: 300 DTYPHEVAGTVSRTMEELXGRNPHRLVWQSKVGPLPWLQPYTDDAIKLYAKQGVKHLILX 479
D YP EV+ TV + ME L NP+RLVWQSKVGP+PWL P TD++IK ++G K+++L
Sbjct: 274 DPYPQEVSATVQKVMERLEYCNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLV 333
Query: 480 PVAFVNXHIE 509
P+AF + HIE
Sbjct: 334 PIAFTSDHIE 343
>AK223190-1|BAD96910.1| 420|Homo sapiens Hypothetical protein
DKFZp686P18130 variant protein.
Length = 420
Score = 91.9 bits (218), Expect = 2e-18
Identities = 39/70 (55%), Positives = 52/70 (74%)
Frame = +3
Query: 300 DTYPHEVAGTVSRTMEELXGRNPHRLVWQSKVGPLPWLQPYTDDAIKLYAKQGVKHLILX 479
D YP EV+ TV + ME L NP+RLVWQSKVGP+PWL P TD++IK ++G K+++L
Sbjct: 271 DPYPQEVSATVQKVMERLEYCNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLV 330
Query: 480 PVAFVNXHIE 509
P+AF + HIE
Sbjct: 331 PIAFTSDHIE 340
>AK092416-1|BAC03882.1| 429|Homo sapiens protein ( Homo sapiens
cDNA FLJ35097 fis, clone PLACE6006222, highly similar to
FERROCHELATASE PRECURSOR (EC 4.99.1.1). ).
Length = 429
Score = 91.9 bits (218), Expect = 2e-18
Identities = 39/70 (55%), Positives = 52/70 (74%)
Frame = +3
Query: 300 DTYPHEVAGTVSRTMEELXGRNPHRLVWQSKVGPLPWLQPYTDDAIKLYAKQGVKHLILX 479
D YP EV+ TV + ME L NP+RLVWQSKVGP+PWL P TD++IK ++G K+++L
Sbjct: 280 DPYPQEVSATVQKVMERLEYCNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLV 339
Query: 480 PVAFVNXHIE 509
P+AF + HIE
Sbjct: 340 PIAFTSDHIE 349
>AJ250235-1|CAB65962.1| 423|Homo sapiens ferrochelatase protein.
Length = 423
Score = 91.9 bits (218), Expect = 2e-18
Identities = 39/70 (55%), Positives = 52/70 (74%)
Frame = +3
Query: 300 DTYPHEVAGTVSRTMEELXGRNPHRLVWQSKVGPLPWLQPYTDDAIKLYAKQGVKHLILX 479
D YP EV+ TV + ME L NP+RLVWQSKVGP+PWL P TD++IK ++G K+++L
Sbjct: 274 DPYPQEVSATVQKVMERLEYCNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLV 333
Query: 480 PVAFVNXHIE 509
P+AF + HIE
Sbjct: 334 PIAFTSDHIE 343
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,740,826
Number of Sequences: 237096
Number of extensions: 1780371
Number of successful extensions: 4077
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4077
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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