Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060214.seq
         (674 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55903 Cluster: PREDICTED: hypothetical protein;...   103   4e-21
UniRef50_UPI00005879D4 Cluster: PREDICTED: hypothetical protein;...    77   4e-13
UniRef50_Q0SU02 Cluster: Bacteriocin ABC transporter, bacterioci...    36   0.68 
UniRef50_Q2U074 Cluster: Predicted protein; n=1; Aspergillus ory...    34   3.6  
UniRef50_A2QXJ3 Cluster: Remark: mutations in tol; n=1; Aspergil...    33   4.8  
UniRef50_UPI000065E879 Cluster: Homolog of Homo sapiens "Dentin ...    33   6.3  
UniRef50_A1Z8P1 Cluster: CG13193-PA; n=2; Sophophora|Rep: CG1319...    33   8.4  

>UniRef50_UPI0000D55903 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 534

 Score =  103 bits (247), Expect = 4e-21
 Identities = 47/73 (64%), Positives = 57/73 (78%)
 Frame = +2

Query: 35  LFGGKALTLQSIGRGFARRLTFEPHNSTLNENTNYFWTDSRPEGFVFEIEAVSVGDKFTI 214
           LF   ALTL+SIGRG+ARR TFE  +S LN N NYFW+D+RPEG+ FE+E +S GDKFTI
Sbjct: 154 LFNDSALTLKSIGRGYARRFTFEATDS-LNNNENYFWSDNRPEGYAFELEVISEGDKFTI 212

Query: 215 YDANHEPQGILEV 253
           +D N E QG +EV
Sbjct: 213 FDINKEAQGTVEV 225



 Score = 87.0 bits (206), Expect = 4e-16
 Identities = 36/49 (73%), Positives = 42/49 (85%)
 Frame = +3

Query: 516 RRVTVNGADIKDIPCQYCVVGLEKYELPVIGTYVDPRIIPGFHYRVRPA 662
           RRVTV G DI D+P QY + GLE YELPV+GTYVDPR+IPGFHY+VRP+
Sbjct: 310 RRVTVKGRDINDVPTQYSMHGLEPYELPVVGTYVDPRVIPGFHYKVRPS 358



 Score = 67.7 bits (158), Expect = 2e-10
 Identities = 35/66 (53%), Positives = 45/66 (68%)
 Frame = +2

Query: 17  SVKPRYLFGGKALTLQSIGRGFARRLTFEPHNSTLNENTNYFWTDSRPEGFVFEIEAVSV 196
           S +  +LFGG+AL L SIG G+A+RLTFEP +S LN + NY W+D+ P+G   EI AV  
Sbjct: 358 SDRKEHLFGGRALKLLSIGMGYAKRLTFEP-DSLLNPD-NYLWSDNHPDGLGLEIRAVHK 415

Query: 197 GDKFTI 214
             KF I
Sbjct: 416 DMKFVI 421



 Score = 53.2 bits (122), Expect = 6e-06
 Identities = 23/66 (34%), Positives = 38/66 (57%)
 Frame = +3

Query: 462 DQTTPKGLRTKARHPVSSRRVTVNGADIKDIPCQYCVVGLEKYELPVIGTYVDPRIIPGF 641
           +Q  P+ L    + P  +    ++ + + D P  Y V   E++++P +G +VD RI+PGF
Sbjct: 78  EQVVPEILEQVEQQPTYT---VLDASTVGDFPAVYTVCSPERHQMPAVGVFVDKRIVPGF 134

Query: 642 HYRVRP 659
            YRVRP
Sbjct: 135 KYRVRP 140



 Score = 46.4 bits (105), Expect = 6e-04
 Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
 Frame = +1

Query: 292 IYEDGSIEKKVKINTLCKVEWYENDGAIKLMPVTG--VAILKKGRGDAAVVRVVNVAIGI 465
           +Y   +IEK+  +    KVE+YE  G  K MP++G  +A+  K +G A +V+V NV I  
Sbjct: 238 VYSRQNIEKRANVRFTGKVEFYET-GVAKPMPLSGLALAVKYKHKGAAEIVKVQNVVIN- 295

Query: 466 KQLRKGYELKPGIQ 507
              ++ Y L PGIQ
Sbjct: 296 ---KQRYTLLPGIQ 306


>UniRef50_UPI00005879D4 Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 298

 Score = 77.0 bits (181), Expect = 4e-13
 Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
 Frame = +2

Query: 8   PPLSVKPRYLFGGKALTLQSIGRGFARRLTFEPHNSTLNENTNYFWTDSRPEGFVFEIEA 187
           P  + K R+ FGG+AL L  IG+G+ +RLTFE  ++  N NTN+FW+D+ P G+ F I A
Sbjct: 128 PTRNRKDRFQFGGRALHLLRIGQGYGKRLTFEDEHA--NINTNFFWSDTLPNGYAFTISA 185

Query: 188 VSVGDKFTI-YDANHEPQGILEVGSNRKIKSSLTRRSTKTVRLKRK 322
           V  GD+F + +  N  P G   V +  + +  ++   TK   + +K
Sbjct: 186 VQPGDEFVLCHHQNRRPFGHATVVATSQHQVEISSSITKDKDIVKK 231



 Score = 34.3 bits (75), Expect = 2.7
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +3

Query: 579 LEKYELPVIGTYVDPRIIPGFHYRVR 656
           L  +E+ V GT VD RI+PGF Y VR
Sbjct: 101 LGPHEMAVYGTNVDERILPGFKYHVR 126


>UniRef50_Q0SU02 Cluster: Bacteriocin ABC transporter,
           bacteriocin-binding protein, putative; n=2; Clostridium
           perfringens SM101|Rep: Bacteriocin ABC transporter,
           bacteriocin-binding protein, putative - Clostridium
           perfringens (strain SM101 / Type A)
          Length = 500

 Score = 36.3 bits (80), Expect = 0.68
 Identities = 15/74 (20%), Positives = 40/74 (54%)
 Frame = +2

Query: 101 EPHNSTLNENTNYFWTDSRPEGFVFEIEAVSVGDKFTIYDANHEPQGILEVGSNRKIKSS 280
           E  N ++N+NTNYF  + + + + ++ ++   G+K +I + N+      ++ + +    +
Sbjct: 123 EKLNKSINDNTNYFENNDKEKEYYYKFQSYEAGNKVSIEEKNNISSSKDDLNNEKDDLET 182

Query: 281 LTRRSTKTVRLKRK 322
           L+R  ++   L ++
Sbjct: 183 LSRSISENKNLNKE 196


>UniRef50_Q2U074 Cluster: Predicted protein; n=1; Aspergillus
           oryzae|Rep: Predicted protein - Aspergillus oryzae
          Length = 695

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 387 RHWCCDSEEGSW*CSCRPCCECGY 458
           R  C D +E  W C CR  CECG+
Sbjct: 362 RRLCYDGKEMIWECLCRQVCECGH 385


>UniRef50_A2QXJ3 Cluster: Remark: mutations in tol; n=1; Aspergillus
           niger|Rep: Remark: mutations in tol - Aspergillus niger
          Length = 725

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +3

Query: 387 RHWCCDSEEGSW*CSCRPCCECGY 458
           R  C D  E  W C CR  CECG+
Sbjct: 366 RRLCYDGNEMIWECLCRQLCECGH 389


>UniRef50_UPI000065E879 Cluster: Homolog of Homo sapiens "Dentin
           sialophosphoprotein precursor; n=1; Takifugu
           rubripes|Rep: Homolog of Homo sapiens "Dentin
           sialophosphoprotein precursor - Takifugu rubripes
          Length = 651

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
 Frame = +2

Query: 101 EPHNSTLNENTNYFWTDSRPEGFVFEIEAVSVGDKFTIYDANHEPQGILEVGSNRKIKSS 280
           +P  S  +E TN   T S P   +   E +S  D      A HEP+  L+   + + KS 
Sbjct: 250 DPEISCSSEPTNAKDTSSDPSSLLCFQETIS-DDPAMEASAGHEPKSHLDDRLHSQEKSK 308

Query: 281 LTRR---STKTVRLKRKSKLIHYVKSSGMK 361
            TRR   ST+    K++ + +H  ++S ++
Sbjct: 309 QTRRKMGSTRWTHKKQEDEHVHRAETSELR 338


>UniRef50_A1Z8P1 Cluster: CG13193-PA; n=2; Sophophora|Rep:
           CG13193-PA - Drosophila melanogaster (Fruit fly)
          Length = 189

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 18/53 (33%), Positives = 31/53 (58%)
 Frame = +3

Query: 24  SQDTCSEVKP*LCSR*DVDLLADLHLSPTTRRSMKTPITSGPTQDQKDSYLRL 182
           S+D CS ++  L ++ +++L  D+HL+ T +  ++T IT     D KD Y  L
Sbjct: 45  SKDYCSSIRGWLTAKGELNL--DIHLNRTLKNGLRTTITLLQLIDGKDRYQTL 95


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,894,134
Number of Sequences: 1657284
Number of extensions: 14630673
Number of successful extensions: 43893
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 41707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43854
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)