Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060214.seq
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    23   1.7  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    23   1.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.0  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   9.2  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.2  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   9.2  

>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 29  RYLFGGKALTLQSIGRGFAR 88
           R+L  GKAL L S+G   +R
Sbjct: 64  RFLMNGKALCLMSLGMFLSR 83


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 29  RYLFGGKALTLQSIGRGFAR 88
           R+L  GKAL L S+G   +R
Sbjct: 64  RFLMNGKALCLMSLGMFLSR 83


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/27 (29%), Positives = 19/27 (70%)
 Frame = +3

Query: 156 DQKDSYLRLRRFRLVINSRFTMPIMSR 236
           ++ ++YL L ++ LV +S+  MP++ +
Sbjct: 24  NKNNTYLVLNKYLLVKHSKPKMPLLPK 50


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 578 PYDAILTRNVFNISAIYGNS 519
           PYDA+  + +++IS  Y N+
Sbjct: 96  PYDALTGQCIYSISRDYLNN 115


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 578 PYDAILTRNVFNISAIYGNS 519
           PYDA+  + +++IS  Y N+
Sbjct: 96  PYDALTGQCIYSISRDYLNN 115


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 578 PYDAILTRNVFNISAIYGNS 519
           PYDA+  + +++IS  Y N+
Sbjct: 96  PYDALTGQCIYSISRDYLNN 115


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 377 LIAPSFSYHSTLHSVL 330
           LI P F +HS + SVL
Sbjct: 93  LITPLFFFHSFMTSVL 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,472
Number of Sequences: 336
Number of extensions: 3518
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)