Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060214.seq
         (674 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   0.54 
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    25   2.2  
AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450 CY...    25   2.2  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    25   2.9  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    24   3.8  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   5.0  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   6.7  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   8.8  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 27.1 bits (57), Expect = 0.54
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = -2

Query: 451 HSQHGRQLHHHDP-SSESQH 395
           HSQH    HHH P  S+ QH
Sbjct: 180 HSQHHHHHHHHHPHHSQQQH 199


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +1

Query: 283 DQKIYEDGSIEKKVKINTLCKVEWYENDGAIKLMPVTG 396
           DQ + EDGS+E +       +++ Y  DG ++ + + G
Sbjct: 138 DQIVLEDGSVEGESNEQEEAQIDVYHVDGQLQHIVMEG 175


>AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450
           CYP6Z2 protein protein.
          Length = 490

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 468 FDPNSHIHNTDDSCITTTLLQNRNTSDGHQFNSAVVFI 355
           F+ N  IHN++D  ++T    NR  +    F S+ VFI
Sbjct: 187 FEANC-IHNSEDPFLSTLRRANRGRNFIDNFRSSGVFI 223


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = -1

Query: 461 PIAT---FTTRTTAASPRPFFRIATPVTGINLIA 369
           PIAT   FTTRT A S    +   TP T   L A
Sbjct: 298 PIATRNRFTTRTPATSTEHRYTTRTPTTTHRLAA 331


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +2

Query: 248 EVGSNRKIKSSLTR-RSTKTVRLKRKSKLIHYVKSS 352
           E+    +I+ +  +  S K   LKR+ KLI ++K+S
Sbjct: 420 EINKKAQIEENYKKIESEKNEALKRQEKLIDHIKTS 455


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 451  HSQHGRQLHHHDPSSESQH 395
            H QH  Q HH    S+S H
Sbjct: 1325 HQQHQLQHHHQPQLSQSSH 1343


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/34 (23%), Positives = 22/34 (64%)
 Frame = +2

Query: 230 EPQGILEVGSNRKIKSSLTRRSTKTVRLKRKSKL 331
           E Q   ++ +N K+K    +RST+++  ++++++
Sbjct: 847 EQQARHDLQTNHKVKQQALKRSTESMEERKRTRV 880


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 445 QHGRQLHHHDPSSESQHQ 392
           Q  +Q HHH    + QHQ
Sbjct: 306 QQQQQHHHHQHQPQQQHQ 323


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,586
Number of Sequences: 2352
Number of extensions: 15214
Number of successful extensions: 27
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)