Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060214.seq
         (674 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1342|AAF58623.1|  189|Drosophila melanogaster CG13193-P...    33   0.47 
BT023694-1|AAY85094.1|   94|Drosophila melanogaster IP03616p pro...    30   2.5  
AE014298-618|AAF45937.1|   94|Drosophila melanogaster CG15579-PA...    30   2.5  
AY122074-1|AAM52586.1|  994|Drosophila melanogaster AT16994p pro...    29   4.4  
AE013599-641|AAF59100.3|  994|Drosophila melanogaster CG11641-PA...    29   4.4  
AE014296-2312|AAN11813.1|  231|Drosophila melanogaster CG32132-P...    29   5.8  
AF351187-1|AAK37558.1| 1629|Drosophila melanogaster furry protei...    29   7.7  
AF310159-1|AAG41424.1| 3479|Drosophila melanogaster fry protein.       29   7.7  
AE014296-1705|ABI31247.1| 1629|Drosophila melanogaster CG32045-P...    29   7.7  
AE014296-1700|AAF50228.2| 3479|Drosophila melanogaster CG32045-P...    29   7.7  

>AE013599-1342|AAF58623.1|  189|Drosophila melanogaster CG13193-PA
           protein.
          Length = 189

 Score = 32.7 bits (71), Expect = 0.47
 Identities = 18/53 (33%), Positives = 31/53 (58%)
 Frame = +3

Query: 24  SQDTCSEVKP*LCSR*DVDLLADLHLSPTTRRSMKTPITSGPTQDQKDSYLRL 182
           S+D CS ++  L ++ +++L  D+HL+ T +  ++T IT     D KD Y  L
Sbjct: 45  SKDYCSSIRGWLTAKGELNL--DIHLNRTLKNGLRTTITLLQLIDGKDRYQTL 95


>BT023694-1|AAY85094.1|   94|Drosophila melanogaster IP03616p
           protein.
          Length = 94

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 450 CGYWDQTTPKGLRTKARH 503
           CGYWD+T P G +   RH
Sbjct: 69  CGYWDETQPSGGKKGRRH 86


>AE014298-618|AAF45937.1|   94|Drosophila melanogaster CG15579-PA
           protein.
          Length = 94

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 450 CGYWDQTTPKGLRTKARH 503
           CGYWD+T P G +   RH
Sbjct: 69  CGYWDETQPSGGKKGRRH 86


>AY122074-1|AAM52586.1|  994|Drosophila melanogaster AT16994p
           protein.
          Length = 994

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 460 Q*PHSQHGRQLHHHDPSS 407
           Q PH  HG Q HHH P++
Sbjct: 135 QHPHPHHGHQHHHHHPAT 152


>AE013599-641|AAF59100.3|  994|Drosophila melanogaster CG11641-PA
           protein.
          Length = 994

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 460 Q*PHSQHGRQLHHHDPSS 407
           Q PH  HG Q HHH P++
Sbjct: 135 QHPHPHHGHQHHHHHPAT 152


>AE014296-2312|AAN11813.1|  231|Drosophila melanogaster CG32132-PA
           protein.
          Length = 231

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 451 HSQHGRQLHHHDPSSESQHQ 392
           H  H +  HHH  SS+ QHQ
Sbjct: 195 HQHHPQHQHHHQYSSQQQHQ 214


>AF351187-1|AAK37558.1| 1629|Drosophila melanogaster furry protein
            short isoform protein.
          Length = 1629

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 132  PITSGPTQDQKDSYLRLRRFRLVINSRFTMPIMS 233
            P    PT+ QKDSYLRL R ++    R    I S
Sbjct: 1220 PTKKVPTESQKDSYLRLWRNQVACAMRLVPQIPS 1253


>AF310159-1|AAG41424.1| 3479|Drosophila melanogaster fry protein.
          Length = 3479

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 132  PITSGPTQDQKDSYLRLRRFRLVINSRFTMPIMS 233
            P    PT+ QKDSYLRL R ++    R    I S
Sbjct: 1220 PTKKVPTESQKDSYLRLWRNQVACAMRLVPQIPS 1253


>AE014296-1705|ABI31247.1| 1629|Drosophila melanogaster CG32045-PD,
            isoform D protein.
          Length = 1629

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 132  PITSGPTQDQKDSYLRLRRFRLVINSRFTMPIMS 233
            P    PT+ QKDSYLRL R ++    R    I S
Sbjct: 1220 PTKKVPTESQKDSYLRLWRNQVACAMRLVPQIPS 1253


>AE014296-1700|AAF50228.2| 3479|Drosophila melanogaster CG32045-PB,
            isoform B protein.
          Length = 3479

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 132  PITSGPTQDQKDSYLRLRRFRLVINSRFTMPIMS 233
            P    PT+ QKDSYLRL R ++    R    I S
Sbjct: 1220 PTKKVPTESQKDSYLRLWRNQVACAMRLVPQIPS 1253


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,575,513
Number of Sequences: 53049
Number of extensions: 690340
Number of successful extensions: 2632
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2627
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)