Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060213.seq
(670 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ185042-1|ABD14422.1| 136|Homo sapiens dendritic cell protein ... 56 9e-08
CR450300-1|CAG29296.1| 374|Homo sapiens GA17 protein. 56 9e-08
BC051292-1|AAH51292.1| 374|Homo sapiens eukaryotic translation ... 56 9e-08
BC019103-1|AAH19103.1| 374|Homo sapiens PCI domain containing 1... 56 9e-08
AY769947-1|AAX12524.1| 374|Homo sapiens fetal lung protein B5 p... 56 9e-08
AK222564-1|BAD96284.1| 374|Homo sapiens dendritic cell protein ... 56 9e-08
AF064603-1|AAC17108.1| 374|Homo sapiens GA17 protein protein. 56 1e-07
>DQ185042-1|ABD14422.1| 136|Homo sapiens dendritic cell protein
GA17 protein.
Length = 136
Score = 56.4 bits (130), Expect = 9e-08
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +1
Query: 58 KALELRRYFKSLGAEISEEKSPXGIEDDLHKIVGVCDACFKXPSESDIEAILN 216
+A ELR Y KS GAEISEE S G+ DL +I+ CD C K + D+E+++N
Sbjct: 11 QAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLK-EDDKDVESVMN 62
>CR450300-1|CAG29296.1| 374|Homo sapiens GA17 protein.
Length = 374
Score = 56.4 bits (130), Expect = 9e-08
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +1
Query: 58 KALELRRYFKSLGAEISEEKSPXGIEDDLHKIVGVCDACFKXPSESDIEAILN 216
+A ELR Y KS GAEISEE S G+ DL +I+ CD C K + D+E+++N
Sbjct: 14 QAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLK-EDDKDVESVMN 65
Score = 51.2 bits (117), Expect = 3e-06
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Frame = +3
Query: 252 KGENLILAFSQRLTXAPGPKLGMVALQSLWRLYNNLEPNSPLRYHVYXHVIELAARVGFV 431
K E LI + ++L + + LQ L L++ ++ N+P+RY VY +I++AA G +
Sbjct: 78 KQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAI 137
Query: 432 REVFTXVEQLRKEFANXPXXNEQMXXCI-XFYIKC*KXKTVN*LLK**LSYWGTYTDGNA 608
+ + T ++Q+RK ++ E+ + Y K + K + G+YT+ NA
Sbjct: 138 QYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNA 197
Query: 609 SYARXXA 629
S AR A
Sbjct: 198 SQARVDA 204
>BC051292-1|AAH51292.1| 374|Homo sapiens eukaryotic translation
initiation factor 3, subunit M protein.
Length = 374
Score = 56.4 bits (130), Expect = 9e-08
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +1
Query: 58 KALELRRYFKSLGAEISEEKSPXGIEDDLHKIVGVCDACFKXPSESDIEAILN 216
+A ELR Y KS GAEISEE S G+ DL +I+ CD C K + D+E+++N
Sbjct: 14 QAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLK-EDDKDVESVMN 65
Score = 51.2 bits (117), Expect = 3e-06
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Frame = +3
Query: 252 KGENLILAFSQRLTXAPGPKLGMVALQSLWRLYNNLEPNSPLRYHVYXHVIELAARVGFV 431
K E LI + ++L + + LQ L L++ ++ N+P+RY VY +I++AA G +
Sbjct: 78 KQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAI 137
Query: 432 REVFTXVEQLRKEFANXPXXNEQMXXCI-XFYIKC*KXKTVN*LLK**LSYWGTYTDGNA 608
+ + T ++Q+RK ++ E+ + Y K + K + G+YT+ NA
Sbjct: 138 QYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNA 197
Query: 609 SYARXXA 629
S AR A
Sbjct: 198 SQARVDA 204
>BC019103-1|AAH19103.1| 374|Homo sapiens PCI domain containing 1
(herpesvirus entry mediator) protein.
Length = 374
Score = 56.4 bits (130), Expect = 9e-08
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +1
Query: 58 KALELRRYFKSLGAEISEEKSPXGIEDDLHKIVGVCDACFKXPSESDIEAILN 216
+A ELR Y KS GAEISEE S G+ DL +I+ CD C K + D+E+++N
Sbjct: 14 QAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLK-EDDKDVESVMN 65
Score = 51.2 bits (117), Expect = 3e-06
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Frame = +3
Query: 252 KGENLILAFSQRLTXAPGPKLGMVALQSLWRLYNNLEPNSPLRYHVYXHVIELAARVGFV 431
K E LI + ++L + + LQ L L++ ++ N+P+RY VY +I++AA G +
Sbjct: 78 KQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAI 137
Query: 432 REVFTXVEQLRKEFANXPXXNEQMXXCI-XFYIKC*KXKTVN*LLK**LSYWGTYTDGNA 608
+ + T ++Q+RK ++ E+ + Y K + K + G+YT+ NA
Sbjct: 138 QYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNA 197
Query: 609 SYARXXA 629
S AR A
Sbjct: 198 SQARVDA 204
>AY769947-1|AAX12524.1| 374|Homo sapiens fetal lung protein B5
protein.
Length = 374
Score = 56.4 bits (130), Expect = 9e-08
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +1
Query: 58 KALELRRYFKSLGAEISEEKSPXGIEDDLHKIVGVCDACFKXPSESDIEAILN 216
+A ELR Y KS GAEISEE S G+ DL +I+ CD C K + D+E+++N
Sbjct: 14 QAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLK-EDDKDVESVMN 65
Score = 51.2 bits (117), Expect = 3e-06
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Frame = +3
Query: 252 KGENLILAFSQRLTXAPGPKLGMVALQSLWRLYNNLEPNSPLRYHVYXHVIELAARVGFV 431
K E LI + ++L + + LQ L L++ ++ N+P+RY VY +I++AA G +
Sbjct: 78 KQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAI 137
Query: 432 REVFTXVEQLRKEFANXPXXNEQMXXCI-XFYIKC*KXKTVN*LLK**LSYWGTYTDGNA 608
+ + T ++Q+RK ++ E+ + Y K + K + G+YT+ NA
Sbjct: 138 QYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNA 197
Query: 609 SYARXXA 629
S AR A
Sbjct: 198 SQARVDA 204
>AK222564-1|BAD96284.1| 374|Homo sapiens dendritic cell protein
variant protein.
Length = 374
Score = 56.4 bits (130), Expect = 9e-08
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +1
Query: 58 KALELRRYFKSLGAEISEEKSPXGIEDDLHKIVGVCDACFKXPSESDIEAILN 216
+A ELR Y KS GAEISEE S G+ DL +I+ CD C K + D+E+++N
Sbjct: 14 QAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLK-EDDKDVESVMN 65
Score = 51.2 bits (117), Expect = 3e-06
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Frame = +3
Query: 252 KGENLILAFSQRLTXAPGPKLGMVALQSLWRLYNNLEPNSPLRYHVYXHVIELAARVGFV 431
K E LI + ++L + + LQ L L++ ++ N+P+RY VY +I++AA G +
Sbjct: 78 KQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAI 137
Query: 432 REVFTXVEQLRKEFANXPXXNEQMXXCI-XFYIKC*KXKTVN*LLK**LSYWGTYTDGNA 608
+ + T ++Q+RK ++ E+ + Y K + K + G+YT+ NA
Sbjct: 138 QYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNA 197
Query: 609 SYARXXA 629
S AR A
Sbjct: 198 SQARVDA 204
>AF064603-1|AAC17108.1| 374|Homo sapiens GA17 protein protein.
Length = 374
Score = 56.0 bits (129), Expect = 1e-07
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +1
Query: 58 KALELRRYFKSLGAEISEEKSPXGIEDDLHKIVGVCDACFKXPSESDIEAILN 216
+A ELR Y KS GAEISEE S G+ DL +I+ CD C K + D+E+++N
Sbjct: 14 QAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLK-EDDKDVESVVN 65
Score = 51.2 bits (117), Expect = 3e-06
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Frame = +3
Query: 252 KGENLILAFSQRLTXAPGPKLGMVALQSLWRLYNNLEPNSPLRYHVYXHVIELAARVGFV 431
K E LI + ++L + + LQ L L++ ++ N+P+RY VY +IE+ A G +
Sbjct: 78 KQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIEVVASCGAI 137
Query: 432 REVFTXVEQLRKEFANXPXXNEQMXXCI-XFYIKC*KXKTVN*LLK**LSYWGTYTDGNA 608
+ + T ++Q+RK ++ E+ + Y K + K + G+YT+ NA
Sbjct: 138 QYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALADCKKSDAASKVMVELLGSYTEDNA 197
Query: 609 SYARXXA 629
S AR A
Sbjct: 198 SQARVDA 204
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,197,677
Number of Sequences: 237096
Number of extensions: 1193529
Number of successful extensions: 1992
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1980
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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