Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060211.seq
(583 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB70D1 Cluster: PREDICTED: similar to Karyopheri... 93 6e-18
UniRef50_Q5T576 Cluster: RAN binding protein 5; n=9; Euteleostom... 77 3e-13
UniRef50_Q5C159 Cluster: SJCHGC08761 protein; n=1; Schistosoma j... 77 4e-13
UniRef50_O60518 Cluster: Ran-binding protein 6; n=68; Eumetazoa|... 70 3e-11
UniRef50_Q2UN71 Cluster: Karyopherin; n=14; Pezizomycotina|Rep: ... 56 6e-07
UniRef50_A4QRM7 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_A6R7C2 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_A7PW36 Cluster: Chromosome chr8 scaffold_34, whole geno... 50 3e-05
UniRef50_Q9N5V3 Cluster: Importin beta family protein 3; n=2; Ca... 50 4e-05
UniRef50_O74476 Cluster: Importin beta-3 subunit; n=1; Schizosac... 49 9e-05
UniRef50_UPI0000DA3D66 Cluster: PREDICTED: similar to RAN bindin... 47 3e-04
UniRef50_Q00SR0 Cluster: Karyopherin (Importin) beta 3; n=2; Ost... 41 0.019
UniRef50_A7R7P4 Cluster: Chromosome undetermined scaffold_1922, ... 41 0.025
UniRef50_A7PYL2 Cluster: Chromosome chr12 scaffold_38, whole gen... 41 0.025
UniRef50_A5AVQ9 Cluster: Putative uncharacterized protein; n=2; ... 41 0.025
UniRef50_Q6C1P3 Cluster: Similar to sp|P32337 Saccharomyces cere... 41 0.025
UniRef50_Q4Q561 Cluster: Putative uncharacterized protein; n=3; ... 40 0.057
UniRef50_Q22UQ4 Cluster: Putative uncharacterized protein; n=1; ... 39 0.075
UniRef50_A2FDC7 Cluster: Putative uncharacterized protein; n=1; ... 39 0.099
UniRef50_Q00WP4 Cluster: Karyopherin (Importin) beta 3; n=1; Ost... 38 0.13
UniRef50_P32337 Cluster: Importin beta-3 subunit; n=10; Saccharo... 38 0.17
UniRef50_A4S6V4 Cluster: Predicted protein; n=1; Ostreococcus lu... 35 1.2
UniRef50_A7T0R7 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.2
UniRef50_A0CES7 Cluster: Chromosome undetermined scaffold_172, w... 35 1.2
UniRef50_Q4UGM1 Cluster: Importin (Karyopherin) beta, putative; ... 34 2.1
UniRef50_Q8TI39 Cluster: Phycocyanin alpha phycocyanobilin lyase... 34 2.8
UniRef50_Q94LC1 Cluster: Putative uncharacterized protein OSJNBa... 33 6.5
UniRef50_Q381P8 Cluster: Putative uncharacterized protein; n=3; ... 32 8.6
>UniRef50_UPI0000DB70D1 Cluster: PREDICTED: similar to Karyopherin
3 CG1059-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to Karyopherin 3 CG1059-PA - Apis mellifera
Length = 1040
Score = 92.7 bits (220), Expect = 6e-18
Identities = 41/78 (52%), Positives = 58/78 (74%)
Frame = +2
Query: 227 PEIAI*AADMLREQLXLTLXMDLSQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 406
P+I A L+EQ+ L++ + ++ +RRKVC+V +E+ARN ID+DGNNQWPEFLQF+F
Sbjct: 93 PKIPPEAQAQLKEQILLSVQNEQTETIRRKVCEVAAEVARNLIDEDGNNQWPEFLQFLFQ 152
Query: 407 CASAQDPNXKEAGIRMFT 460
CA++ P KE +RMFT
Sbjct: 153 CANSPVPALKENALRMFT 170
Score = 71.3 bits (167), Expect = 2e-11
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 17/83 (20%)
Frame = +3
Query: 12 DQAQFYQLLNTLLSTDNDIRSQAE-----------------DAYNNIPTETKVVHLXNSI 140
D QF QLLNTLLSTDND R+QAE DAYNN+P ++KV L S+
Sbjct: 4 DLDQFQQLLNTLLSTDNDARTQAEVQHVANMLSEFACGHHSDAYNNLPVDSKVTFLLTSL 63
Query: 141 QNADIAEDVRQTAAVLIRRLFSA 209
NA + E++R AAVL+RRLFS+
Sbjct: 64 CNATLTEEMRAMAAVLLRRLFSS 86
>UniRef50_Q5T576 Cluster: RAN binding protein 5; n=9;
Euteleostomi|Rep: RAN binding protein 5 - Homo sapiens
(Human)
Length = 126
Score = 77.0 bits (181), Expect = 3e-13
Identities = 32/79 (40%), Positives = 51/79 (64%)
Frame = +2
Query: 221 VLPEIAI*AADMLREQLXLTLXMDLSQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFM 400
V P + ++ +L + + M+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+
Sbjct: 48 VYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFL 107
Query: 401 FTCASAQDPNXKEAGIRMF 457
F S+Q+ +EA + +F
Sbjct: 108 FDSVSSQNVGLREAALHIF 126
Score = 33.1 bits (72), Expect(2) = 0.26
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 12 DQAQFYQLLNTLLSTDNDIRSQAE 83
+Q QFY LL LLS DN +R QAE
Sbjct: 5 EQQQFYLLLGNLLSPDNVVRKQAE 28
Score = 23.4 bits (48), Expect(2) = 0.26
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 162 DVRQTAAVLIRRLFSA 209
+ RQ AAVL+RRL S+
Sbjct: 28 EARQMAAVLLRRLLSS 43
>UniRef50_Q5C159 Cluster: SJCHGC08761 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08761 protein - Schistosoma
japonicum (Blood fluke)
Length = 183
Score = 76.6 bits (180), Expect = 4e-13
Identities = 32/80 (40%), Positives = 51/80 (63%)
Frame = +2
Query: 260 REQLXLTLXMDLSQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNXKE 439
++QL L + + Q +RRKV D++SEL R DDDGN++WPEF + +++ D +E
Sbjct: 104 KQQLVLIVVHENEQLMRRKVADLISELVRMEFDDDGNSRWPEFTPILLDWSTSPDSGLRE 163
Query: 440 AGIRMFTSVPGVFGNRQTEN 499
+F SVP +FGN+Q ++
Sbjct: 164 IACHIFGSVPSLFGNQQAQS 183
>UniRef50_O60518 Cluster: Ran-binding protein 6; n=68;
Eumetazoa|Rep: Ran-binding protein 6 - Homo sapiens
(Human)
Length = 1105
Score = 70.1 bits (164), Expect = 3e-11
Identities = 32/92 (34%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Frame = +2
Query: 248 ADMLRE---QLXLTLXMDLSQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASA 418
AD+ R+ +L L + ++ +R+K+CD+ + LARN ID+DG N WPE L+F+ +
Sbjct: 91 ADVQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFLIDSIYS 150
Query: 419 QDPNXKEAGIRMFTSVPGVFGNRQTENLDV*K 514
++ E + +F PG+FG ++ +LD+ K
Sbjct: 151 KNVVLWEVALHVFWHFPGIFGTQERHDLDIIK 182
Score = 56.8 bits (131), Expect = 3e-07
Identities = 27/66 (40%), Positives = 41/66 (62%)
Frame = +3
Query: 12 DQAQFYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLXNSIQNADIAEDVRQTAAVLI 191
++ +FYQLL L++ +R QAE+ Y NIP K L ++++N +VRQ AA L+
Sbjct: 15 EKQEFYQLLKNLINPSCMVRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALL 74
Query: 192 RRLFSA 209
RRL S+
Sbjct: 75 RRLLSS 80
>UniRef50_Q2UN71 Cluster: Karyopherin; n=14; Pezizomycotina|Rep:
Karyopherin - Aspergillus oryzae
Length = 1095
Score = 56.0 bits (129), Expect = 6e-07
Identities = 24/74 (32%), Positives = 45/74 (60%)
Frame = +2
Query: 254 MLREQLXLTLXMDLSQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNX 433
++R++L L + +R+K+ D V+E+AR + D+ +QWPE L +F + + D
Sbjct: 100 VIRQKLVTCLTTETVTDVRKKIGDAVAEIARQYTDN--GDQWPELLGVLFQASQSPDAGL 157
Query: 434 KEAGIRMFTSVPGV 475
+EA R+F++ PG+
Sbjct: 158 REAAFRIFSTTPGI 171
Score = 32.7 bits (71), Expect = 6.5
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +3
Query: 30 QLLNTLLSTDNDIRSQAEDAYNN--IPTETKVVHLXNSIQNADIAEDVRQT-AAVLIRRL 200
QLL L + DN +R+QAE+ NN I V+ + + Q E V +T AAVL RR+
Sbjct: 14 QLLRALTTPDNTVRTQAEEQLNNDWIQGRPDVLLMGLAEQIQGAEELVTRTFAAVLFRRI 73
>UniRef50_A4QRM7 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1144
Score = 54.8 bits (126), Expect = 1e-06
Identities = 26/85 (30%), Positives = 49/85 (57%)
Frame = +2
Query: 248 ADMLREQLXLTLXMDLSQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDP 427
A+++R++L TL + + +R K+ D V+E+AR D+G + WP+ L +F + A D
Sbjct: 98 AEVIRQKLLQTLASESDRGVRNKISDAVAEVARQ-CSDNGVS-WPDLLAALFQLSMAPDA 155
Query: 428 NXKEAGIRMFTSVPGVFGNRQTENL 502
+E R+F + PG+ + E++
Sbjct: 156 GKREISFRVFATTPGIIEKQHEESV 180
Score = 35.1 bits (77), Expect = 1.2
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +3
Query: 18 AQFYQLLNTLLSTDNDIRSQAEDAYNNIPTETK----VVHLXNSIQNADIAEDVRQTAAV 185
A+ QLL L S DN +RSQAED N T T+ ++ L I +R ++AV
Sbjct: 10 AELGQLLEALQSPDNAVRSQAEDHLQNNWTVTRPEVLLMGLVELIGAQANTTTIRSSSAV 69
Query: 186 LIRRL 200
+ RR+
Sbjct: 70 IFRRI 74
>UniRef50_A6R7C2 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 1091
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/80 (28%), Positives = 44/80 (55%)
Frame = +2
Query: 257 LREQLXLTLXMDLSQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNXK 436
+RE+L +L + +R K+ D V+E+A + D+ QW E L +F + + DP +
Sbjct: 101 IREKLLESLGSESLAHVRNKIGDAVAEIAGQYADN--GEQWSELLGVLFQASQSTDPGMR 158
Query: 437 EAGIRMFTSVPGVFGNRQTE 496
++ R+F++ PG+ + E
Sbjct: 159 DSAFRIFSTTPGIIEKQHEE 178
Score = 34.7 bits (76), Expect = 1.6
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +3
Query: 30 QLLNTLLSTDNDIRSQAEDAYNNI----PTETKVVHLXNSIQNADIAEDVRQTAAVLIRR 197
QLL L S DN +R+QAE+ NN + ++ L +Q A+ A R AAVL RR
Sbjct: 14 QLLLALASADNIVRAQAEEQLNNEWVKGRPDVLLIGLAEQLQGAEDA-GTRSFAAVLFRR 72
Query: 198 L 200
+
Sbjct: 73 I 73
>UniRef50_A7PW36 Cluster: Chromosome chr8 scaffold_34, whole genome
shotgun sequence; n=15; Magnoliophyta|Rep: Chromosome
chr8 scaffold_34, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1116
Score = 50.4 bits (115), Expect = 3e-05
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = +2
Query: 290 DLSQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNXKEAGIRMFTSVP 469
+ ++ + +K+CD VSELA + D G WPE L FMF C ++ + +EA + +F +
Sbjct: 115 ETAKTISKKLCDTVSELASGILPDGG---WPELLPFMFQCVTSSNFKLQEAALLIFAQLS 171
Query: 470 GVFGNRQTENLD 505
G +LD
Sbjct: 172 QYIGETLLPHLD 183
>UniRef50_Q9N5V3 Cluster: Importin beta family protein 3; n=2;
Caenorhabditis|Rep: Importin beta family protein 3 -
Caenorhabditis elegans
Length = 1092
Score = 50.0 bits (114), Expect = 4e-05
Identities = 26/65 (40%), Positives = 34/65 (52%)
Frame = +3
Query: 12 DQAQFYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLXNSIQNADIAEDVRQTAAVLI 191
D QF +L+ L S DNDIR QAE+ Y I TKV L + + D R T V +
Sbjct: 2 DVNQFTELITKLQSADNDIRKQAEEVYEKIEGPTKVAALFEAYTHHTNNSDARSTVLVFL 61
Query: 192 RRLFS 206
RR+ +
Sbjct: 62 RRVLA 66
Score = 48.8 bits (111), Expect = 9e-05
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +2
Query: 305 LRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNXKEAGIRMFTSVPGVFGN 484
+++K+ D++SE+A N IDD G+ W L+ M C ++D + + P +FGN
Sbjct: 100 IKKKIADLISEIASNLIDDSGDMTWGGVLELMDHCLKSEDLTGNYIALLILRGCPIIFGN 159
Query: 485 R 487
R
Sbjct: 160 R 160
>UniRef50_O74476 Cluster: Importin beta-3 subunit; n=1;
Schizosaccharomyces pombe|Rep: Importin beta-3 subunit -
Schizosaccharomyces pombe (Fission yeast)
Length = 1095
Score = 48.8 bits (111), Expect = 9e-05
Identities = 22/79 (27%), Positives = 42/79 (53%)
Frame = +2
Query: 257 LREQLXLTLXMDLSQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNXK 436
L+ QL + +R K+CD ++E+AR+ D G +WPE + +F ++ D + +
Sbjct: 99 LQSQLLACFVKESVPTVRNKLCDTIAEIARSIYDCQG--EWPELINVIFNAVNSPDESFR 156
Query: 437 EAGIRMFTSVPGVFGNRQT 493
E+ R TS+P + + +
Sbjct: 157 ESVFRTITSLPRLLSGQDS 175
>UniRef50_UPI0000DA3D66 Cluster: PREDICTED: similar to RAN binding
protein 5; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to RAN binding protein 5 - Rattus norvegicus
Length = 1056
Score = 47.2 bits (107), Expect = 3e-04
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3
Query: 81 EDAYNNIPTETKVVHLXNSIQNADIAEDVRQTAAVLIRRLFSA 209
E+ Y NIP +K+ L +I+N AE+ RQ AAVL+RRL S+
Sbjct: 154 EETYENIPGRSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSS 196
Score = 35.5 bits (78), Expect = 0.92
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 221 VLPEIAI*AADMLREQLXLTLXMDLSQXLRRKVCDVVSELARNHI 355
V P + ++ +L + + M+ +R+K+CD+ +ELARN I
Sbjct: 201 VYPALPSDVQTAIKSELLMIIQMETQSSMRKKICDIAAELARNLI 245
>UniRef50_Q00SR0 Cluster: Karyopherin (Importin) beta 3; n=2;
Ostreococcus|Rep: Karyopherin (Importin) beta 3 -
Ostreococcus tauri
Length = 1517
Score = 41.1 bits (92), Expect = 0.019
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +2
Query: 251 DMLREQLXLTLXMDLSQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPN 430
+ ++ +L L + + + RK CD++ E+A + D WPE + FMF+ S
Sbjct: 806 ERVKRELLNALREEPERKISRKTCDLICEVAAGGSERD--EPWPELMPFMFSAVSEGGEG 863
Query: 431 XKEAGIRMF 457
KE+ + +F
Sbjct: 864 LKESALNVF 872
>UniRef50_A7R7P4 Cluster: Chromosome undetermined scaffold_1922, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1922, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 1180
Score = 40.7 bits (91), Expect = 0.025
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +2
Query: 296 SQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNXKEAGIRMFTSV 466
++ + +K+CD VSELA + + ++G WP L FMF C + +EA +F +
Sbjct: 854 AKSISKKLCDTVSELASSILLENG---WPNLLSFMFQCMTFDSTKLQEAVFLIFAQL 907
>UniRef50_A7PYL2 Cluster: Chromosome chr12 scaffold_38, whole genome
shotgun sequence; n=9; Magnoliophyta|Rep: Chromosome
chr12 scaffold_38, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1048
Score = 40.7 bits (91), Expect = 0.025
Identities = 19/76 (25%), Positives = 42/76 (55%)
Frame = +2
Query: 254 MLREQLXLTLXMDLSQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNX 433
++++ L ++ M+ S +RR +VVS +A+ + +WP+ L F+F C+ + +
Sbjct: 78 LVKQSLIESITMEHSPPVRRASANVVSIVAKYAVPA---GEWPDLLPFLFQCSQSAQEDH 134
Query: 434 KEAGIRMFTSVPGVFG 481
+E + +F+S+ G
Sbjct: 135 REVALILFSSLTETIG 150
Score = 32.3 bits (70), Expect = 8.6
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 33 LLNTLLSTDNDIRSQAEDAYNNIPTETKVV-HLXNSIQNADIAEDVRQTAAVLIRR 197
LL L DND R QAE+ + + +V+ L + ++ A +VRQ +AVL+R+
Sbjct: 8 LLIQFLMPDNDARRQAEEQIKRLAKDPQVIPALIHHLRTAK-TPNVRQLSAVLLRK 62
>UniRef50_A5AVQ9 Cluster: Putative uncharacterized protein; n=2;
Magnoliophyta|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1028
Score = 40.7 bits (91), Expect = 0.025
Identities = 19/76 (25%), Positives = 42/76 (55%)
Frame = +2
Query: 254 MLREQLXLTLXMDLSQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNX 433
++++ L ++ M+ S +RR +VVS +A+ + +WP+ L F+F C+ + +
Sbjct: 78 LVKQSLIESITMEHSPPVRRASANVVSIVAKYAVPA---GEWPDLLPFLFQCSQSAQEDH 134
Query: 434 KEAGIRMFTSVPGVFG 481
+E + +F+S+ G
Sbjct: 135 REVALILFSSLTETIG 150
Score = 32.3 bits (70), Expect = 8.6
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 33 LLNTLLSTDNDIRSQAEDAYNNIPTETKVV-HLXNSIQNADIAEDVRQTAAVLIRR 197
LL L DND R QAE+ + + +V+ L + ++ A +VRQ +AVL+R+
Sbjct: 8 LLIQFLMPDNDARRQAEEQIKRLAKDPQVIPALIHHLRTAK-TPNVRQLSAVLLRK 62
>UniRef50_Q6C1P3 Cluster: Similar to sp|P32337 Saccharomyces
cerevisiae YMR308c PSE1 beta karyopherin; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P32337 Saccharomyces
cerevisiae YMR308c PSE1 beta karyopherin - Yarrowia
lipolytica (Candida lipolytica)
Length = 1091
Score = 40.7 bits (91), Expect = 0.025
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = +2
Query: 254 MLREQLXLTLXMDLSQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNX 433
M R L + R K+CD ++EL D++ WP+ +Q +F A
Sbjct: 99 MCRNILLGGFTQETDNSTRHKLCDAMAELVE---DENTQGSWPQLVQTLFEGTQAPSGGI 155
Query: 434 KEAGIRMFTSVPGVFGNRQTEN 499
+E+ R+ +VP V Q N
Sbjct: 156 RESCFRLIATVPTVLNENQDIN 177
>UniRef50_Q4Q561 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1082
Score = 39.5 bits (88), Expect = 0.057
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +3
Query: 12 DQAQFYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLXNSIQNADIAED--VRQTAAV 185
D + LLN L S DN R AE+ YN + + V + + + ++D VR + V
Sbjct: 2 DSSHLIALLNGLRSADNQERKSAEEHYNGMVASSPVWMMCALAETSATSQDTSVRTMSLV 61
Query: 186 LIRRLFSA 209
L+R+LF+A
Sbjct: 62 LLRKLFNA 69
>UniRef50_Q22UQ4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1113
Score = 39.1 bits (87), Expect = 0.075
Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 257 LREQLXLTLXMDLSQXLRRKVCDVVSELARNHIDD-DGNNQWPEFLQFMFTCASAQDPNX 433
++ L L + + +R +CD + EL + ++D D NQWPE + +++ +
Sbjct: 137 IKTALFEMLTNEKNNTVRGLICDCIGELGGSLLEDKDAGNQWPELISIVWSLFMKESVEL 196
Query: 434 KEAGIRMFTSV 466
E+G ++ T++
Sbjct: 197 LESGFKILTNL 207
>UniRef50_A2FDC7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1006
Score = 38.7 bits (86), Expect = 0.099
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Frame = +3
Query: 36 LNTLLSTDNDIRSQAEDAYN----NIPTETKVVHLXNSIQNADIAEDVRQTAAVLIRRL 200
L STDN+ RSQAE +N N P E+ +V L N IQ+++ E ++ T AVL+ R+
Sbjct: 11 LTACYSTDNEQRSQAEAQFNQIFQNFPQES-IVELLNLIQSSN--ERLKNTGAVLLHRM 66
>UniRef50_Q00WP4 Cluster: Karyopherin (Importin) beta 3; n=1;
Ostreococcus tauri|Rep: Karyopherin (Importin) beta 3 -
Ostreococcus tauri
Length = 1024
Score = 38.3 bits (85), Expect = 0.13
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +2
Query: 308 RRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNXKEAGIRMFTSVPGVFGNR 487
R + DV++++AR + N+WPE L+FM CA++ + + R+F S+ +
Sbjct: 45 RNALLDVIAKIARWCVP---TNEWPELLEFMGQCANSPETAHRALAFRLFESLTETIASA 101
Query: 488 QTEN 499
+E+
Sbjct: 102 LSEH 105
>UniRef50_P32337 Cluster: Importin beta-3 subunit; n=10;
Saccharomycetales|Rep: Importin beta-3 subunit -
Saccharomyces cerevisiae (Baker's yeast)
Length = 1089
Score = 37.9 bits (84), Expect = 0.17
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 257 LREQLXLTLXMDLSQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNXK 436
+R L + + +R K+ D ++E ++ + WPE LQ + + +PN +
Sbjct: 102 IRSSLLKGFLSERADSIRHKLSDAIAECVQDDLP-----AWPELLQALIESLKSGNPNFR 156
Query: 437 EAGIRMFTSVP 469
E+ R+ T+VP
Sbjct: 157 ESSFRILTTVP 167
>UniRef50_A4S6V4 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 979
Score = 35.1 bits (77), Expect = 1.2
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 296 SQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNXKEAGIRMFTSV 466
S+ LR V DV++++AR + +W E L+F+ CAS+ + + ++F S+
Sbjct: 51 SKALRNAVLDVIAKIARWTVPQ---GEWNELLEFLGQCASSPETAHRALAFKLFESL 104
>UniRef50_A7T0R7 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1107
Score = 35.1 bits (77), Expect = 1.2
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 254 MLREQLXLTLXMDLSQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNX 433
ML++ L L + +R V VVS +A++ + QWPE L F+ +Q+
Sbjct: 77 MLKQGLLQVLTQESVPLVRHSVGQVVSMIAKHELPA---GQWPELLLFLQEYVRSQEAAN 133
Query: 434 KEAGIRMFTSVPGVFGNR 487
+E G+ + +SV G +
Sbjct: 134 REMGMFVLSSVTESVGEQ 151
>UniRef50_A0CES7 Cluster: Chromosome undetermined scaffold_172,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_172,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1081
Score = 35.1 bits (77), Expect = 1.2
Identities = 12/58 (20%), Positives = 32/58 (55%)
Frame = +2
Query: 281 LXMDLSQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNXKEAGIRM 454
+ +++S +R ++CD + E+ + +DD +N+W L ++ + + + E G ++
Sbjct: 98 IEVEMSHIVRNQLCDTIGEIGGSLYEDDSHNEWHNLLPTLWQMFLSPNNDIIECGFKI 155
>UniRef50_Q4UGM1 Cluster: Importin (Karyopherin) beta, putative;
n=3; Piroplasmida|Rep: Importin (Karyopherin) beta,
putative - Theileria annulata
Length = 1312
Score = 34.3 bits (75), Expect = 2.1
Identities = 14/67 (20%), Positives = 32/67 (47%)
Frame = +2
Query: 254 MLREQLXLTLXMDLSQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNX 433
+L+ L ++ + Q +RR VCD +++L + +WPE +P
Sbjct: 94 LLKSSLLKSIESETHQSIRRNVCDTIADLVSRSMSP---GEWPELSSITIRLIQNDNPLY 150
Query: 434 KEAGIRM 454
+++G+++
Sbjct: 151 RKSGLKL 157
>UniRef50_Q8TI39 Cluster: Phycocyanin alpha phycocyanobilin lyase
related protein; n=2; Methanosarcina|Rep: Phycocyanin
alpha phycocyanobilin lyase related protein -
Methanosarcina acetivorans
Length = 508
Score = 33.9 bits (74), Expect = 2.8
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +3
Query: 9 GDQAQFYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLXNSIQNADIAEDVRQTAAVL 188
GD+ +L+ L S DIR A +A N+ E V HL + ADI+ +VR +
Sbjct: 341 GDEKALAAILSRLDSPYPDIRKHAAEALGNLRDEKAVPHLVKKL--ADISPEVRNASVYA 398
Query: 189 IRRL 200
+ L
Sbjct: 399 LGNL 402
>UniRef50_Q94LC1 Cluster: Putative uncharacterized protein
OSJNBa0026A15.29; n=2; Oryza sativa|Rep: Putative
uncharacterized protein OSJNBa0026A15.29 - Oryza sativa
(Rice)
Length = 151
Score = 32.7 bits (71), Expect = 6.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 83 GRIQQHSNRNKSSAPXEFNSKCRHCRRCASNGGRA 187
GRIQ+ ++ AP EF S C RR GGR+
Sbjct: 8 GRIQRPASATPCCAPAEFGSACGPARRTTIGGGRS 42
>UniRef50_Q381P8 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma brucei
Length = 1072
Score = 32.3 bits (70), Expect = 8.6
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 12 DQAQFYQLLNTLLSTDNDIRSQAEDAYNNI--PTETKVVHLXNSIQNADIAEDVRQTAAV 185
+Q Q QL+ LLS DN++R AE Y+++ T ++ + + + Q V
Sbjct: 2 NQEQLNQLVTNLLSADNEVRKSAEAQYDSLVHGNATWMMCCLSELCASTENTSTMQMGLV 61
Query: 186 LIRRLF 203
L+++LF
Sbjct: 62 LLKKLF 67
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,924,761
Number of Sequences: 1657284
Number of extensions: 9798011
Number of successful extensions: 21659
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 21133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21654
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -